Chr:
Chr1
Start:
25612778
End:
25613280
Strand:
.
Ref_name:
OSA-LNCN0560
Sequence
(OSA-LNCN0560.1):
CCCCGCCCCCCCAAGCCGCUCGUCGCCUCCCCCACUCCCGACGCCGCCUCCCCCUCUCCCCACCGGCGCCGCUUCCCCUCCCCUCCCUCCGGCGGCGCCGCUCCCUUUCCCCAUCUCCCGCCUCUCCCCCUCCCCCCAGCCGGCCGCCUCUCCCACCACCGACGCCGCUUCCCUUCCCUUCUCCCUCCUUUCUCGCCGGCAGGCUGCGGCGGCGGCGACAGAGGGCUGCGGCGGUGGCGGCGGCGGAGGGCUGCGGCGGCGGCGGCGGCUUCCCCCACGCUAGCGGCAGCAGCACCUUUCCCUACACUAGCGGCGGUGGCGGCGGCGGCUCUCCUUCCCGUCUCGCCGGCACGGCGCAACGACGGCGGGGUGCGGCAGAGACGGCCGUCCCUCCCCCUCUCCCUCUCCCUCUCCCUCUCCCUCUCCCCGUCGGCGUCGACGGCGACGGCGGCGACGGCGUCGGCUUCGUCCGAGGGUGGAUCCUCCGGCGGCGGUGGUUUUUU
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
1
NEP:
0.2%
LE_num:
LEP:
90.24%
ME_num:
MEP:
8.74%
HE_num:
HEP:
0.81%
Type:
HCR (High-Capacity ncRNA)
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
crown
Tau :
0.93
Avg Expression:
0.82
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
| Num. | Condition | log2(FoldChange) | Padj |
|---|---|---|---|
| 1 | Caidao // leaf // none (control)--/--Caidao // leaf // 0.5% Na2CO3 solution for 36h | 8.44365663190358 | 8.48352503307533e-07 |
| 2 | WD20342 // leaf // none (control)--/--WD20342 // leaf // 0.5% Na2CO3 solution for 36h | 5.95431665493211 | 0.00192177337696251 |