Chr:
Chr1
Start:
23871128
End:
23872027
Strand:
-
Ref_name:
OSA-LNCN0515
Sequence
(OSA-LNCN0515.1):
AGCCGAUAGGAAGGGAGCAACUUUUGCCACCGUGGCCCCCCCACCUCCUCCGACCGUUGGGGGAGUUGCUGGAGAGGCCAUCGCUGCACCGGUGAGCGGGGGGCAUUGACAACGCUAUCCGACCGGCAAGGACGGUGACCCGACGGCCGGCGACAACGACGACCGGUCGGCCGGCGAGCAAGACGGCACACACACCAAGGGGACGAUGACGUCAGUCGGCUCGCCCACCCCGCAGGGGGGGGGGGGGACGGCCUCGCGACGGGUGGCGAUGCAUUCUACCGCCAGCGGCCUCGCGAUGAAUGGCGAACGUACGACAUCGGGAGGCGGCGUCGCGACGGACGGCGGAGGAGUCGGACGGGGGGCGACGAAGGCUUUCGUGGCCACUCAGCGCUUGCAGUUGUGAGCCAGAUGUCGGAAGCCCCGGCAACGGCAGCAUCGCACCGGGAGACGGCACGAGGCCACCUGAUGUGAGGUAAAGAAACAGUUGAAACACCAGUCGAGAAGGUCCGGCGGGAUGCCGUGGGCUUUUAAAUCAUUUCAUUAUAAUAUAUAUCCGCAGCAAAGCUCAGGGUAUAAGUAUUACUAAUUUUGGUGACAGCAACACGACGAAGGAUCAACAACUUCUCUGACUUGUAUGUUGUACGUGGCAGGCUGUGUCUGGAAAUUCUGGAGAAGUAAUUACUCCUAGCGCGUUUUUUUUGACCGUGUAAAUAAUGCGGCUAUAUGUUUUUAGUUGUAAGCAGUUGUACACGUGGAUUUUACCUUUUCGUUUCGAAAGAUAUGCAUGCAUGUUGUUGUGUUAGGUCGGCUAGCACUAGCAUGGAUCAAAAUAUUUGUCUAAAAAAGUUUCAAAAAUUGUAAAUUUGUAAGCGGAC
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
1
NEP:
0.2%
LE_num:
LEP:
95.93%
ME_num:
MEP:
3.05%
HE_num:
HEP:
0.81%
Type:
HCR (High-Capacity ncRNA)
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
shoot
Tau :
0.97
Avg Expression:
1.46
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
| Num. | Condition | log2(FoldChange) | Padj |
|---|---|---|---|
| 1 | BR-IRGA_409 // spikelet // control condition (29C) for 7 hrs--/--BR-IRGA_409 // spikelet // high temperature treatment (38C) for 7 hrs | 3.43308609070443 | 8.60934772425057e-05 |