Chr:
Chr1
Start:
3837584
End:
3838217
Strand:
+
Ref_name:
OSA-LNCN0095
Sequence
(OSA-LNCN0095.1):
GCAGACAAGUGAAACAAUGCAGUUUGCAAGUGCAAAAAUAAGGAGGCUUGCUAGCUACUAGCUCUUCCAGCUCUCUUCUUUGCUAUAUAAGCAGCUGUUGUGACCUUGAGAGAAUGGAUGGCAUGGUGGGGGAAGCUCAAAAGACUAUAAAGCCACACAGCCCAGCUUUUCUACUGUAGAGUAGUAUCUGCUUGCCAAGUAUAUACUAACUAUUCUCCAGGAUCUAGAGUUUUG
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
1
NEP:
0.2%
LE_num:
LEP:
75.2%
ME_num:
MEP:
24.19%
HE_num:
HEP:
0.41%
Type:
HCR (High-Capacity ncRNA)
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
flag_leaf
Tau :
0.70
Avg Expression:
1.67
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
Num. | Condition | log2(FoldChange) | Padj |
---|---|---|---|
1 | Amaroo // embryo // dry seed 0 h--/--Amaroo // embryo // 24hN | 3.47499565113205 | 0.00915762335748099 |
2 | Amaroo // embryo // dry seed 0 h--/--Amaroo // coleoptile // 2dN | 3.26597980393586 | 0.0101740419550024 |