Chr:
Chr1
Start:
1056567
End:
1057090
Strand:
+
Ref_name:
OSA-LNCN0025
Sequence
(OSA-LNCN0025.1):
UGUUCAUCAUGCAUAUAGUAUAUGAUUGGGCUCACAUAUCAUAAGCAAAUAAAUGAUCAUGCGGUGCAAGUGCAAUAUAGGACGUUUAAACGAACGCACGGAAGCAGAGAGAUGCAUUAACAAAUCCCAAAUGUCUGACCCGUUGAGGAUCGAUUUGCCCACGAUAUAUAUAGAGAAUGUAACCAACAACGACAUGCCAUCCAACUCUGUGAUCUCAACUGCCAAACUAAUACAUACUACAGCUUGAUUUCCCAUUGAUGCAUCUACAUUUUCAGAGCUUGAUUAAUUCAAUCAAACUCUUGCAACAGGAUAGUUGUGUAACUAUGGUGAUACUAUGAUUUAGCCUCUUCAAAGGUAUCGACUCUAGUCUUGUCAGACAAUGAGAAGUCAAUCACUGGCUAGCCUGUACCCAUGUGCCACACUGCUAGGAUAUGAUUCAGAGAGG
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
1
NEP:
0.2%
LE_num:
LEP:
83.13%
ME_num:
MEP:
16.67%
HE_num:
HEP:
0.0%
Type:
MCR ()
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
coleoptile
Tau :
0.93
Avg Expression:
1.34
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
| Num. | Condition | log2(FoldChange) | Padj |
|---|---|---|---|
| 1 | Amaroo // embryo // dry seed 0 h--/--Amaroo // coleoptile // 3dN | 5.74452799866572 | 4.39096139591641e-05 |
| 2 | Amaroo // embryo // dry seed 0 h--/--Amaroo // coleoptile // 4dA | 5.70978061143842 | 0.000278956393359291 |
| 3 | Amaroo // embryo // dry seed 0 h--/--Amaroo // coleoptile // 4dN | 5.39730776244823 | 0.000552758540154256 |
| 4 | Amaroo // embryo // dry seed 0 h--/--Amaroo // coleoptile // 3dN1dA | 5.26422410687501 | 0.000744896332891584 |
| 5 | Amaroo // embryo // dry seed 0 h--/--Amaroo // coleoptile // 2dA | 3.83008412343757 | 0.0276411997587892 |