Chr:
Chr8
Start:
2427354
End:
2431177
Strand:
-
Ref_name:
LOC9271022
Sequence
(XR_001547899.2):
AAAAAAAAACAAUUCUUUGAUGCUUCCCUCAUCCCAUCAGCCAUGGUCCUAAAGCUUCUUGAUGGUGGUGGCGGCGGCGGCGGCGACGACGGAUUCAAUCCCUCUGCUGCCGAGCACAAGCGACACGAGCAGAUCGGCAACCUCGCCGUCGAGCUCAAGCACCAGCGCCUUGCUUCUAAGCCAUCAGCUAUGGUACGGAGGUAAGCUAGCUUCAUGGGGUUGCCGGCGGCGGCUGAUUUGGUCCCUUGCAGCUGAGCACAAGCGACGCGCGAGCAGAUCGGCGACCUCACCGGCGAGCUCGAGCACCACGCAGUGCAUUAGGCGACACAACAUCAAUCUCAAGUGCGGGCCACCCAAUCGAUUGCCUUGCUUCCGAGUUCUAGCCUGAGCUCUUGGAACUAGCGCGCAGGGCAUGAGAGCACAGGAUACCAGCAAAUUCAAACUUCUUGCAGCUGCAUUUGACACUAGAUUCCAAUGCGACCUUUUUGAGUAUAACUUAUUCUUCAUGUCAACACGAGUGAAGCCAAGAUUCUCAUAUCCACAUGAUUGUUUUGCCAACAAGUCAACAACCGCUUUAGUUGAAAUGCCUACAGAUUUUGCAACUUCAACACUUGCAACCUGAGCUUCAUUUACCUUCCUUUGUGAUCUUAACUGGCCAGCGGAUGAAUCAUCAGGCUCAACAAGAUUUGUGAAUGACGUCGUUGUAGCAGAUGUAUUGUCCAAGAACAUGGGACUUGCUCCUGCAUCAUGCAGUUGUGAUGCCUCUGAUGGAGGAAUCAUGCUGUUGUUUGGCAUAGCACCAAGAUCUGGCGUCGAUGCCGGUGCUUGAUAAGAGAGAUUAAUUUAUCAGGAUGCUAAUGCAUGUUUAGAUAUGAGUUGUUUGGAUGCUGGAGGAUUUAACGGGAGAACUGAGACAAAUGGCGCCAUAAUUCUUUUUCCCGCCAGCAAUUCUAUCUAUUUGGCGCCUAAAAUCUGUUAGUAAAAUUAAUGGUGUUGUUUCUAACUAUUAAACGGAGACGUAAUGCCGUGCGUGUGACGGAGGCGCAAAGGUGUGGAGGCCCACUAGAAAAUACGAAACCAAUAAGCGAUUGACAUCUGGCAA
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
1
NEP:
0.2%
LE_num:
LEP:
8.94%
ME_num:
MEP:
4.27%
HE_num:
HEP:
86.59%
Type:
HCR (High-Capacity ncRNA)
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
2nd_leaf
Tau :
0.83
Avg Expression:
145.44
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
| Num. | Condition | log2(FoldChange) | Padj |
|---|---|---|---|
| 1 | IR64 // panicle // Dawn--/--IR64 // panicle // Dawn + 10.5h | -4.14299346515454 | 0.0102112249798582 |
| 2 | Nipponbare // root // "mock,7_days"--/--Nipponbare // root // "auxin(50CM_2,4_D),7_days" | -1.09513831812945 | 2.80478124637846e-08 |
| 3 | IR64 // leaf // ethanol solvent (untreated control)--/--IR64 // leaf // Paclobutrazol (PB) | -1.14398151304386 | 0.0157716803517493 |
| 4 | 9311 // leaf // control--/--9311 // leaf // salt | 1.46006162299892 | 3.88649178775842e-14 |
| 5 | Nipponbare // panicle // AM--/--Nipponbare // panicle // PM | -2.88317187922381 | 1.67770752719891e-29 |
| 6 | 9L136 // leaf // control--/--9L136 // leaf // salt | 1.69399924393958 | 6.38266436863811e-17 |