Chr:
Chr12
Start:
13487253
End:
13490734
Strand:
+
Ref_name:
LOC9270044
Sequence
(XR_001541757.2):
AUGAUUCCACACCCGCCCCACCUCGGCGUGAUGACUCCACCGCGCUCCUCGCUACCGCGUGAUGACUCCGCCGCCGCGCUACUUGCUCCGUGCCUCCUCCCUCUUUCCCCGACGGAGAUGAGGUAGUUCCCCACCGCCACCGCACUCCACCGCGGCCUGCCCUCGCCGGCGCUGCUCACCCUCGCGUCGAUGGAUCCGACGCCCUACGCCCACCGCCCUCCAGCCAUCCGCUGCCGUCUGGCGUCUAUCGCCGUCAGUAUUGGAUGCAGGCCGCUGCCCCGGCGUCGACUGCUCUCACUAUUGGAUCAAGGCCGUCAACCACCGUCGGGCGUCAUCCACUGCCACGGCCGCCCGCCGCCCAAUCGAGCAGGCCAACACCCCAUCUCCAACGCCUGCGAGCCUUGUAGGUGAACCAUGUACAGAGGAUGCUGGUGGAGGUGUGGGGGCUAAUCACUAAUCAAACAUAUUUUCGUGGAUCUAACUUAUUACCUGAGUUCUCCUCUUUGGUGAUGGAGCCGGUUCAGGUGCCCUGUAUGCCUGUAAUGGAAUAGUUGCCACAUCCCCAGGAAAUCAAAAGGAGUAAAAACUGUUCACUUGUUGCGUUAAUGUGUCCCUGACUCCCUGACAUGUCAAGGAGACUGACAAAAGGAUUUGAAAUAUUCCAAUCGAUGUGGUACUUCUUCACUAAUUCGUUAUCAGAAUGGUUCCAAUGAUGCAGCAUAGGAGGAGGAAGAAGGUUCAAAAUUCAAGCACAAUGGAAGUCGGCAAGCACACAUGUGGAUUCAGAUAUGCAGUGAAUAAACAAAGAAACAGUCUAUUUCUGCCAUAAAAGAUUUUUUUGGACAUGAUAUUUCUGCCAUUAAAGAUUGGCAAUUGAACGAACGAAUGUGCAUGGUCUGUUGCAUACACUGGUCGUUGUAGAUGCUGAAUGCAUCGUCGAAUUAAGCUAGGAAUGUGAUUGAGGGGCCGAUGAUGAUUAUGGUGUUUGUCACGAGUAACAUUGACCUGAUGGUGCCGGCGUUCAACACAACGGGUGACUAGUUGAAUGGUCAAGCGGCUGCUUACGCUGGUGCCUAGGUUGGUAGACCUGGCGUGCUCAAGAUCACCAGCGCGGUGAGCAUCUCUGCCACCGAUGCUAGGUGGUUGCUGAGGUGAUGUUCUUCAACAGUGGGAUCCCAUUGCUGCUCAUUGUCGAAUGGGAUGGCAAGCCAGUUGGUGAUGGUACCUAAACUAAGUUUUGAUUAAUUGGAGCAGUGCUGAUUGGAAAGAGAAUAUUAUUGGAGCAAUAUUAUUGGGAAAAUGUAUUUUGUGGGAGCAGUUUGGCAAGGGUUUUAUUGGAGCAAUUCUGGUUGGAAUUAUAUUUGUAUCGGAUCAAUACUGAUUGGAAAGGAUUUUAUCAGACCAAUGUUGAUUAGGAAGGUUUGUGUAAGUGUGGUCAGAAGUUUAUCCCUUCGCAAUUCAAUAGAUUCACUCUAUUAUGCUUACAAGAACUAAUGUGCUUUUUUUUUUGAAAGAAUUAUUUUCUUUGAGAUCUUGAUGUUUCUUGUCCAGGCAUUCCCAUGAGUUGCAAAUCCAAGGAAGUUGAUAACACCCAUAGUCUCAUACAAUGGAAAGUUAACCUUUCUGCAAUAUUUCAGUUUGUCUCAACUUUCAAUUAGCACAAACCGCUGCAGAGGCCAAAGCAACAAAAGCCAUUUUGGCACAGUUGCAGUGCCUAGAAAACAUCAGAAAUUGAGAAGAAUAUAUACUUUGUGUGGUGAAUGUGAGCUUGAAGUGCAAGAAGGUAGAUGAGCAGUUAGACCUUUCUCAGAAGUAAAGCGUCUUCAAGCACAACUUCUGGCUUUUGGGAGUCUCUGAGAUCGACAUGUUCCUAGCUAAUCGAUUUAUCAACUUCAAUAUCAUCAUUUAGUAAACUUAUAGUACUUUGUUAACAUGGAAUUAGGUGUGUGACUUCUAAAGUUAUAUAAAGUAUCAUCAAGAGUAAAGUCCA
Sequence
(XR_001541756.2):
AUGAUUCCACACCCGCCCCACCUCGGCGUGAUGACUCCACCGCGCUCCUCGCUACCGCGUGAUGACUCCGCCGCCGCGCUACUUGCUCCGUGCCUCCUCCCUCUUUCCCCGACGGAGAUGAGGUAGUUCCCCACCGCCACCGCACUCCACCGCGGCCUGCCCUCGCCGGCGCUGCUCACCCUCGCGUCGAUGGAUCCGACGCCCUACGCCCACCGCCCUCCAGCCAUCCGCUGCCGUCUGGCGUCUAUCGCCGUCAGUAUUGGAUGCAGGCCGCUGCCCCGGCGUCGACUGCUCUCACUAUUGGAUCAAGGCCGUCAACCACCGUCGGGCGUCAUCCACUGCCACGGCCGCCCGCCGCCCAAUCGAGCAGGCCAACACCCCAUCUCCAACGCCUGCGAGCCUUGUAGGUGAACCAUGUACAGAGGAUGCUGGUGGAGGUGUGGGGGCUAAUCACUAAUCAAACAUAUUUUCGUGGAUCUAACUUAUUACCUGAGUUCUCCUCUUUGGUGAUGGAGCCGGUUCAGGUGCCCUGUAUGCCUGUAAUGGAAUAGUUGCCACAUCCCCAGGAAAUCAAGUAAUUUAAAUACUUCUCUAUUGAAUAAACUACAUAAACGACAUAACGGUGAUUCAGUAGUUUUUAUCAUUAUAGUUGUUAUCGUUGUUUUUUUGCUGGUGACGGUGCUCUUAUACUGAUAAUGCAUAAUGAAUCACUGUGCCAUGAGUAAAAUCUGUUUUAUUGUAGAAGGAGUAAAAACUGUUCACUUGUUGCGUUAAUGUGUCCCUGACUCCCUGACAUGUCAAGGAGACUGACAAAAGGAUUUGAAAUAUUCCAAUCGAUGUGGUACUUCUUCACUAAUUCGUUAUCAGAAUGGUUCCAAUGAUGCAGCAUAGGAGGAGGAAGAAGGUUCAAAAUUCAAGCACAAUGGAAGUCGGCAAGCACACAUGUGGAUUCAGAUAUGCAGUGAAUAAACAAAGAAACAGUCUAUUUCUGCCAUAAAAGAUUUUUUUGGACAUGAUAUUUCUGCCAUUAAAGAUUGGCAAUUGAACGAACGAAUGUGCAUGGUCUGUUGCAUACACUGGUCGUUGUAGAUGCUGAAUGCAUCGUCGAAUUAAGCUAGGAAUGUGAUUGAGGGGCCGAUGAUGAUUAUGGUGUUUGUCACGAGUAACAUUGACCUGAUGGUGCCGGCGUUCAACACAACGGGUGACUAGUUGAAUGGUCAAGCGGCUGCUUACGCUGGUGCCUAGGUUGGUAGACCUGGCGUGCUCAAGAUCACCAGCGCGGUGAGCAUCUCUGCCACCGAUGCUAGGUGGUUGCUGAGGUGAUGUUCUUCAACAGUGGGAUCCCAUUGCUGCUCAUUGUCGAAUGGGAUGGCAAGCCAGUUGGUGAUGGUACCUAAACUAAGUUUUGAUUAAUUGGAGCAGUGCUGAUUGGAAAGAGAAUAUUAUUGGAGCAAUAUUAUUGGGAAAAUGUAUUUUGUGGGAGCAGUUUGGCAAGGGUUUUAUUGGAGCAAUUCUGGUUGGAAUUAUAUUUGUAUCGGAUCAAUACUGAUUGGAAAGGAUUUUAUCAGACCAAUGUUGAUUAGGAAGGUUUGUGUAAGUGUGGUCAGAAGUUUAUCCCUUCGCAAUUCAAUAGAUUCACUCUAUUAUGCUUACAAGAACUAAUGUGCUUUUUUUUUUGAAAGAAUUAUUUUCUUUGAGAUCUUGAUGUUUCUUGUCCAGGCAUUCCCAUGAGUUGCAAAUCCAAGGAAGUUGAUAACACCCAUAGUCUCAUACAAUGGAAAGUUAACCUUUCUGCAAUAUUUCAGUUUGUCUCAACUUUCAAUUAGCACAAACCGCUGCAGAGGCCAAAGCAACAAAAGCCAUUUUGGCACAGUUGCAGUGCCUAGAAAACAUCAGAAAUUGAGAAGAAUAUAUACUUUGUGUGGUGAAUGUGAGCUUGAAGUGCAAGAAGGUAGAUGAGCAGUUAGACCUUUCUCAGAAGUAAAGCGUCUUCAAGCACAACUUCUGGCUUUUGGGAGUCUCUGAGAUCGACAUGUUCCUAGCUAAUCGAUUUAUCAACUUCAAUAUCAUCAUUUAGUAAACUUAUAGUACUUUGUUAACAUGGAAUUAGGUGUGUGACUUCUAAAGUUAUAUAAAGUAUCAUCAAGAGUAAAGUCCA
Sequence
(XR_003240104.1):
AUGAUUCCACACCCGCCCCACCUCGGCGUGAUGACUCCACCGCGCUCCUCGCUACCGCGUGAUGACUCCGCCGCCGCGCUACUUGCUCCGUGCCUCCUCCCUCUUUCCCCGACGGAGAUGAGGUAGUUCCCCACCGCCACCGCACUCCACCGCGGCCUGCCCUCGCCGGCGCUGCUCACCCUCGCGUCGAUGGAUCCGACGCCCUACGCCCACCGCCCUCCAGCCAUCCGCUGCCGUCUGGCGUCUAUCGCCGUCAGUAUUGGAUGCAGGCCGCUGCCCCGGCGUCGACUGCUCUCACUAUUGGAUCAAGGCCGUCAACCACCGUCGGGCGUCAUCCACUGCCACGGCCGCCCGCCGCCCAAUCGAGCAGGCCAACACCCCAUCUCCAACGCCUGCGAGCCUUGUAGGUGAACCAUGUACAGAGGAUGCUGGUGGAGGUGUGGGGGCUAAUCACUAAUCAAACAUAUUUUCGUGGAUCUAACUUAUUACCUGAGUUCUCCUCUUUGGUGAUGGAGCCGGUUCAGGUGCCCUGUAUGCCUGUAAUGGAAUAGUUGCCACAUCCCCAGGAAAUCAAGUAAUUUAAAUACUUCUCUAUUGAAUAAACUACAUAAACGACAUAACGGUGAUUCAGUAGUUUUUAUCAUUAUAGUUGUUAUCGUUGUUUUUUUGCUGGUGACGGUGCUCUUAUACUGAUAAUGCAUAAUGAAUCACUGUGCCAUGAGUAAAAUCUGUUUUAUUGUAGAAGGAGUAAAAACUGUUCACUUGUUGCGUUAAUGUGUCCCUGACUCCCUGACAUGUCAAGGAGACUGACAAAAGGAUUUGAAAUAUUCCAAUCGAUGUGGUACUUCUUCACUAAUUCGUUAUCAGAAUGGUUCCAAUGAUGCAGCAUAGGAGGAGGAAGAAGGUUCAAAAUUCAAGCACAAUGGAAGUCGGCAAGCACACAUGUGGAUUCAGAUAUGCAGUGAAUAAACAAAGAAACAGUCUAUUUCUGCCAUAAAAGAUUUUUUUGGACAUGAUAUUUCUGCCAUUAAAGAUUGGCAAUUGAACGAACGAAUGUGUAUGACCCCACCCACACGUCGACGCCCAUGUUGAUUUAGAUUAUUCUAGGUAGAUAACAUUGUACUUUUGUGGCGCUUUGUAGGCAUGGUCUGUUGCAUACACUGGUCGUUGUAGAUGCUGAAUGCAUCGUCGAAUUAAGCUAGGAAUGUGAUUGAGGGGCCGAUGAUGAUUAUGGUGUUUGUCACGAGUAACAUUGACCUGAUGGUGCCGGCGUUCAACACAACGGGUGACUAGUUGAAUGGUCAAGCGGCUGCUUACGCUGGUGCCUAGGUUGGUAGACCUGGCGUGCUCAAGAUCACCAGCGCGGUGAGCAUCUCUGCCACCGAUGCUAGGUGGUUGCUGAGGUGAUGUUCUUCAACAGUGGGAUCCCAUUGCUGCUCAUUGUCGAAUGGGAUGGCAAGCCAGUUGGUGAUGGUACCUAAACUAAGUUUUGAUUAAUUGGAGCAGUGCUGAUUGGAAAGAGAAUAUUAUUGGAGCAAUAUUAUUGGGAAAAUGUAUUUUGUGGGAGCAGUUUGGCAAGGGUUUUAUUGGAGCAAUUCUGGUUGGAAUUAUAUUUGUAUCGGAUCAAUACUGAUUGGAAAGGAUUUUAUCAGACCAAUGUUGAUUAGGAAGGUUUGUGUAAGUGUGGUCAGAAGUUUAUCCCUUCGCAAUUCAAUAGAUUCACUCUAUUAUGCUUACAAGAACUAAUGUGCUUUUUUUUUUGAAAGAAUUAUUUUCUUUGAGAUCUUGAUGUUUCUUGUCCAGGCAUUCCCAUGAGUUGCAAAUCCAAGGAAGUUGAUAACACCCAUAGUCUCAUACAAUGGAAAGUUAACCUUUCUGCAAUAUUUCAGUUUGUCUCAACUUUCAAUUAGCACAAACCGCUGCAGAGGCCAAAGCAACAAAAGCCAUUUUGGCACAGUUGCAGUGCCUAGAAAACAUCAGAAAUUGAGAAGAAUAUAUACUUUGUGUGGUGAAUGUGAGCUUGAAGUGCAAGAAGGUAGAUGAGCAGUUAGACCUUUCUCAGAAGUAAAGCGUCUUCAAGCACAACUUCUGGCUUUUGGGAGUCUCUGAGAUCGACAUGUUCCUAGCUAAUCGAUUUAUCAACUUCAAUAUCAUCAUUUAGUAAACUUAUAGUACUUUGUUAACAUGGAAUUAGGUGUGUGACUUCUAAAGUUAUAUAAAGUAUCAUCAAGAGUAAAGUCCA
Sequence
(XR_003240105.1):
AUGAUUCCACACCCGCCCCACCUCGGCGUGAUGACUCCACCGCGCUCCUCGCUACCGCGUGAUGACUCCGCCGCCGCGCUACUUGCUCCGUGCCUCCUCCCUCUUUCCCCGACGGAGAUGAGGUAGUUCCCCACCGCCACCGCACUCCACCGCGGCCUGCCCUCGCCGGCGCUGCUCACCCUCGCGUCGAUGGAUCCGACGCCCUACGCCCACCGCCCUCCAGCCAUCCGCUGCCGUCUGGCGUCUAUCGCCGUCAGUAUUGGAUGCAGGCCGCUGCCCCGGCGUCGACUGCUCUCACUAUUGGAUCAAGGCCGUCAACCACCGUCGGGCGUCAUCCACUGCCACGGCCGCCCGCCGCCCAAUCGAGCAGGCCAACACCCCAUCUCCAACGCCUGCGAGCCUUGUAGGUGAACCAUGUACAGAGGAUGCUGGUGGAGGUGUGGGGGCUAAUCACUAAUCAAACAUAUUUUCGUGGAUCUAACUUAUUACCUGAGUUCUCCUCUUUGGUGAUGGAGCCGGUUCAGGUGCCCUGUAUGCCUGUAAUGGAAUAGUUGCCACAUCCCCAGGAAAUCAAAAGGAGUAAAAACUGUUCACUUGUUGCGUUAAUGUGUCCCUGACUCCCUGACAUGUCAAGGAGACUGACAAAAGGAUUUGAAAUAUUCCAAUCGAUGUGGUACUUCUUCACUAAUUCGUUAUCAGAAUGGUUCCAAUGAUGCAGCAUAGGAGGAGGAAGAAGGUUCAAAAUUCAAGCACAAUGGAAGUCGGCAAGCACACAUGUGGAUUCAGAUAUGCAGUGAAUAAACAAAGAAACAGUCUAUUUCUGCCAUAAAAGAUUUUUUUGGACAUGAUAUUUCUGCCAUUAAAGAUUGGCAAUUGAACGAACGAAUGUGUAUGACCCCACCCACACGUCGACGCCCAUGUUGAUUUAGAUUAUUCUAGGUAGAUAACAUUGUACUUUUGUGGCGCUUUGUAGGCAUGGUCUGUUGCAUACACUGGUCGUUGUAGAUGCUGAAUGCAUCGUCGAAUUAAGCUAGGAAUGUGAUUGAGGGGCCGAUGAUGAUUAUGGUGUUUGUCACGAGUAACAUUGACCUGAUGGUGCCGGCGUUCAACACAACGGGUGACUAGUUGAAUGGUCAAGCGGCUGCUUACGCUGGUGCCUAGGUUGGUAGACCUGGCGUGCUCAAGAUCACCAGCGCGGUGAGCAUCUCUGCCACCGAUGCUAGGUGGUUGCUGAGGUGAUGUUCUUCAACAGUGGGAUCCCAUUGCUGCUCAUUGUCGAAUGGGAUGGCAAGCCAGUUGGUGAUGGUACCUAAACUAAGUUUUGAUUAAUUGGAGCAGUGCUGAUUGGAAAGAGAAUAUUAUUGGAGCAAUAUUAUUGGGAAAAUGUAUUUUGUGGGAGCAGUUUGGCAAGGGUUUUAUUGGAGCAAUUCUGGUUGGAAUUAUAUUUGUAUCGGAUCAAUACUGAUUGGAAAGGAUUUUAUCAGACCAAUGUUGAUUAGGAAGGUUUGUGUAAGUGUGGUCAGAAGUUUAUCCCUUCGCAAUUCAAUAGAUUCACUCUAUUAUGCUUACAAGAACUAAUGUGCUUUUUUUUUUGAAAGAAUUAUUUUCUUUGAGAUCUUGAUGUUUCUUGUCCAGGCAUUCCCAUGAGUUGCAAAUCCAAGGAAGUUGAUAACACCCAUAGUCUCAUACAAUGGAAAGUUAACCUUUCUGCAAUAUUUCAGUUUGUCUCAACUUUCAAUUAGCACAAACCGCUGCAGAGGCCAAAGCAACAAAAGCCAUUUUGGCACAGUUGCAGUGCCUAGAAAACAUCAGAAAUUGAGAAGAAUAUAUACUUUGUGUGGUGAAUGUGAGCUUGAAGUGCAAGAAGGUAGAUGAGCAGUUAGACCUUUCUCAGAAGUAAAGCGUCUUCAAGCACAACUUCUGGCUUUUGGGAGUCUCUGAGAUCGACAUGUUCCUAGCUAAUCGAUUUAUCAACUUCAAUAUCAUCAUUUAGUAAACUUAUAGUACUUUGUUAACAUGGAAUUAGGUGUGUGACUUCUAAAGUUAUAUAAAGUAUCAUCAAGAGUAAAGUCCA
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
1
NEP:
0.2%
LE_num:
LEP:
43.29%
ME_num:
MEP:
13.62%
HE_num:
HEP:
42.89%
Type:
HCR (High-Capacity ncRNA)
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
pistil
Tau :
0.74
Avg Expression:
16.55
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
Num. | Condition | log2(FoldChange) | Padj |
---|---|---|---|
1 | Caidao // leaf // none (control)--/--Caidao // leaf // 0.5% Na2CO3 solution for 36h | -8.18140481920132 | 2.7063196925927e-08 |
2 | WD20342 // leaf // none (control)--/--WD20342 // leaf // 0.5% Na2CO3 solution for 36h | -6.90513737848672 | 0.000334118379919637 |