Chr:
Chr12
Start:
449484
End:
452395
Strand:
+
Ref_name:
LOC9268659
Sequence
(XR_001541732.2):
GAAUCGGUCGUCGCUCAUCUCCCCACGUCGCAUCCCGUCGUCCCCAUCGAGCGAUCCCCUUCCUCCCUGAUUUCUCCGUCUAGAGGCGGCAUCGAUGCUCCUCGCCUCCAAGAUCUUCCAUCGUAGGUCGUCGCCCACGACGGCUUGCCAUCUGCUAUCCCGUGCCCAGAUGUUGGAUGCAUGAUCUCCUCCGUCGGCACAAUCCGUGUAGCCGCAUCCAUCGGCGUUCGUCUCCCCGUACGGUGGCGACCGGAUUGGCCACUGACCAGUGCCUCCUCUCCGUACACGAGAGUUGGGUUUUCUUAUGUUCAAGCUCCCUCCUCGGUUGCUCCGUUCAUCUUCACUGGAUUUCUCUGGUGAGUCUGCUGCAUUCUUUGCCUUCUUUUAUCCCCUUCCUUCACCCUUCUCUGGUCAACUACAUCAGUGGCUGCAAGCCUGCAAGAUGGAGCUGAGUUGGGAGGCUGAGCAAGCAGCAACAGGAGGAAUCAAGGAACAAGGGGGAAAAUGUGAGGGAGGAGGAAACUGGGAUACCUAAGUAAUUUGCUAAUGCGUUUUUAGGCUACCUAUUCCAAUCCCUCAUCGUAUGGUGUACAUUCAGAUUCAGAUAUGAUUGGCUUGAUAUUUAGGAGUCUUUAGAGGCCAAAUCAAGGAAUGCAAAUAACUAUGGAGUUGUACAGGGUUCCUUAAGCCCUCUAUUAAGUUCAACCAUAACUCGAGCUGUCAACUUGCAAGGGUUUUCAUCCUGUCUAUAUGGUCAAAUAUUGCCAGUCUGUAACUAAAUGUUGUAAGCCUGUGAGAUAGUUGCCAGACACUUAUAAUCGGUAGGUCACCCAAGAUACAAGUACAAAGCAAGAGAUAUUCAUCAAAGGGUACACAACAAUUUUGUAGACAAGUGAAAAAUCGUUGGUCAGUUUGAAGGAACAAAUUUCCUCUUGCAAAAUACCUAUUCCUGUCUAGAGGGCCAAUGCACUAUCCUCAGCUCAGGAAAACAUAAUGGAUGAAGCUGUCAAUUGUUCCACUGAGGAACAAACACAAGAUAAGAUAAUAGUGAACAUUCAUACUGCAUUGAUCUCUGCUCCGAGUUCUAAGCAAGAGAUGGGCCAAAUGACAUGCAUUUGUAGCUCAUCUCCUGAUGAAGGUGGUCAUCCCAGAGCUUCAGUAUUGUGCGAGCUAUUCUGAGAUACACUGCCACUGGAGUCGCUCAAAUAUUUGGGGCUCCCAUGUAAUAUUAUCCCACCUACCAUGGCAAGAAGCUGUCUCAAAUAUAGCAAUGCUCACGCUUCGGCCACUCUUUGUUUUGUGGUGGGAAGAUAAGACCAAGGAUAUGUUCAUCUGUAUUGGCCUGGGGAUCGACCAACUGAUGUUCUAGCUAUUGCUAGCUCACCAUGUCUAAUAGGCAAAUACUAAAUGAUCCGUAUCGCCGAUUCAUAAUAUUGAGCUUCUAAAAAUUAUCCCUACAAAGGAUUGUGCAUAUUCAGUCAAUGGUGCUUGCCAUUUCUGAAACCAGGCUACUUUCACUAAAUGGCACAAAAUGCCCCUUUGUGUUAUUUGCGAUAGCUGCAACUGUUGUGAUCGGAGAUGUUUUGCGAUAUAGUUACUACAUGCAUUGAUUCUUCCAUGCCA
Sequence
(XR_001541733.2):
GAAUCGGUCGUCGCUCAUCUCCCCACGUCGCAUCCCGUCGUCCCCAUCGAGCGAUCCCCUUCCUCCCUGAUUUCUCCGUCUAGAGGCGGCAUCGAUGCUCCUCGCCUCCAAGAUCUUCCAUCGUAGGUCGUCGCCCACGACGGCUUGCCAUCUGCUAUCCCGUGCCCAGAUGUUGGAUGCAUGAUCUCCUCCGUCGGCACAAUCCGUGUAGCCGCAUCCAUCGGCGUUCGUCUCCCCGUACGGUGGCGACCGGAUUGGCCACUGACCAGUGCCUCCUCUCCGUACACGAGAGUUGGGUUUUCUUAUGUUCAAGCUCCCUCCUCGGUUGCUCCGUUCAUCUUCACUGGAUUUCUCUGGUGAGUCUGCUGCAUUCUUUGCCUUCUUUUAUCCCCUUCCUUCACCCUUCUCUGGUCAACUACAUCAGUGGCUGCAAGCCUGCAAGAUGGAGCUGAGUUGGGAGGCUGAGCAAGCAGCAACAGGAGGAAUCAAGGAACAAGGGGGAAAAUGUGAGGGAGGAGGAAACUGGGAUACCUAAGUAAUUUGCUAAUGCGUUUUUAGGCUACCUAUUCCAAUCCCUCAUCGUAUGGUGUACAUUCAGAUUCAGAUAUGAUUGGCUUGAUAUUUAGGAGAGGCCAAAUCAAGGAAUGCAAAUAACUAUGGAGUUGUACAGGGUUCCUUAAGCCCUCUAUUAAGUUCAACCAUAACUCGAGCUGUCAACUUGCAAGGGUUUUCAUCCUGUCUAUAUGGUCAAAUAUUGCCAGUCUGUAACUAAAUGUUGUAAGCCUGUGAGAUAGUUGCCAGACACUUAUAAUCGGUAGGUCACCCAAGAUACAAGUACAAAGCAAGAGAUAUUCAUCAAAGGGUACACAACAAUUUUGUAGACAAGUGAAAAAUCGUUGGUCAGUUUGAAGGAACAAAUUUCCUCUUGCAAAAUACCUAUUCCUGUCUAGAGGGCCAAUGCACUAUCCUCAGCUCAGGAAAACAUAAUGGAUGAAGCUGUCAAUUGUUCCACUGAGGAACAAACACAAGAUAAGAUAAUAGUGAACAUUCAUACUGCAUUGAUCUCUGCUCCGAGUUCUAAGCAAGAGAUGGGCCAAAUGACAUGCAUUUGUAGCUCAUCUCCUGAUGAAGGUGGUCAUCCCAGAGCUUCAGUAUUGUGCGAGCUAUUCUGAGAUACACUGCCACUGGAGUCGCUCAAAUAUUUGGGGCUCCCAUGUAAUAUUAUCCCACCUACCAUGGCAAGAAGCUGUCUCAAAUAUAGCAAUGCUCACGCUUCGGCCACUCUUUGUUUUGUGGUGGGAAGAUAAGACCAAGGAUAUGUUCAUCUGUAUUGGCCUGGGGAUCGACCAACUGAUGUUCUAGCUAUUGCUAGCUCACCAUGUCUAAUAGGCAAAUACUAAAUGAUCCGUAUCGCCGAUUCAUAAUAUUGAGCUUCUAAAAAUUAUCCCUACAAAGGAUUGUGCAUAUUCAGUCAAUGGUGCUUGCCAUUUCUGAAACCAGGCUACUUUCACUAAAUGGCACAAAAUGCCCCUUUGUGUUAUUUGCGAUAGCUGCAACUGUUGUGAUCGGAGAUGUUUUGCGAUAUAGUUACUACAUGCAUUGAUUCUUCCAUGCCA
Sequence
(XR_001541734.2):
GAAUCGGUCGUCGCUCAUCUCCCCACGUCGCAUCCCGUCGUCCCCAUCGAGCGAUCCCCUUCCUCCCUGAUUUCUCCGUCUAGAGGCGGCAUCGAUGCUCCUCGCCUCCAAGAUCUUCCAUCGUAGGUCGUCGCCCACGACGGCUUGCCAUCUGCUAUCCCGUGCCCAGAUGUUGGAUGCAUGAUCUCCUCCGUCGGCACAAUCCGUGUAGCCGCAUCCAUCGGCGUUCGUCUCCCCGUACGGUGGCGACCGGAUUGGCCACUGACCAGUGCCUCCUCUCCGUACACGAGAGUUGGGUUUUCUUAUGUUCAAGCUCCCUCCUCGGUUGCUCCGUUCAUCUUCACUGGAUUUCUCUGUGGCUGCAAGCCUGCAAGAUGGAGCUGAGUUGGGAGGCUGAGCAAGCAGCAACAGGAGGAAUCAAGGAACAAGGGGGAAAAUGUGAGGGAGGAGGAAACUGGGAUACCUAAGUAAUUUGCUAAUGCGUUUUUAGGCUACCUAUUCCAAUCCCUCAUCGUAUGGUGUACAUUCAGAUUCAGAUAUGAUUGGCUUGAUAUUUAGGAGUCUUUAGAGGCCAAAUCAAGGAAUGCAAAUAACUAUGGAGUUGUACAGGGUUCCUUAAGCCCUCUAUUAAGUUCAACCAUAACUCGAGCUGUCAACUUGCAAGGGUUUUCAUCCUGUCUAUAUGGUCAAAUAUUGCCAGUCUGUAACUAAAUGUUGUAAGCCUGUGAGAUAGUUGCCAGACACUUAUAAUCGGUAGGUCACCCAAGAUACAAGUACAAAGCAAGAGAUAUUCAUCAAAGGGUACACAACAAUUUUGUAGACAAGUGAAAAAUCGUUGGUCAGUUUGAAGGAACAAAUUUCCUCUUGCAAAAUACCUAUUCCUGUCUAGAGGGCCAAUGCACUAUCCUCAGCUCAGGAAAACAUAAUGGAUGAAGCUGUCAAUUGUUCCACUGAGGAACAAACACAAGAUAAGAUAAUAGUGAACAUUCAUACUGCAUUGAUCUCUGCUCCGAGUUCUAAGCAAGAGAUGGGCCAAAUGACAUGCAUUUGUAGCUCAUCUCCUGAUGAAGGUGGUCAUCCCAGAGCUUCAGUAUUGUGCGAGCUAUUCUGAGAUACACUGCCACUGGAGUCGCUCAAAUAUUUGGGGCUCCCAUGUAAUAUUAUCCCACCUACCAUGGCAAGAAGCUGUCUCAAAUAUAGCAAUGCUCACGCUUCGGCCACUCUUUGUUUUGUGGUGGGAAGAUAAGACCAAGGAUAUGUUCAUCUGUAUUGGCCUGGGGAUCGACCAACUGAUGUUCUAGCUAUUGCUAGCUCACCAUGUCUAAUAGGCAAAUACUAAAUGAUCCGUAUCGCCGAUUCAUAAUAUUGAGCUUCUAAAAAUUAUCCCUACAAAGGAUUGUGCAUAUUCAGUCAAUGGUGCUUGCCAUUUCUGAAACCAGGCUACUUUCACUAAAUGGCACAAAAUGCCCCUUUGUGUUAUUUGCGAUAGCUGCAACUGUUGUGAUCGGAGAUGUUUUGCGAUAUAGUUACUACAUGCAUUGAUUCUUCCAUGCCA
Sequence
(XR_001541735.2):
GAAUCGGUCGUCGCUCAUCUCCCCACGUCGCAUCCCGUCGUCCCCAUCGAGCGAUCCCCUUCCUCCCUGAUUUCUCCGUCUAGAGGCGGCAUCGAUGCUCCUCGCCUCCAAGAUCUUCCAUCGUAGGUCGUCGCCCACGACGGCUUGCCAUCUGCUAUCCCGUGCCCAGAUGUUGGAUGCAUGAUCUCCUCCGUCGGCACAAUCCGUGUAGCCGCAUCCAUCGGCGUUCGUCUCCCCGUACGGUGGCGACCGGAUUGGCCACUGACCAGUGCCUCCUCUCCGUACACGAGAGUUGGGUUUUCUUAUGUUCAAGCUCCCUCCUCGGUUGCUCCGUUCAUCUUCACUGGAUUUCUCUGGUGAGUCUGCUGCAUUCUUUGCCUUCUUUUAUCCCCUUCCUUCACCCUUCUCUGGUCAACUACAUCAGUGGCUGCAAGCCUGCAAGAUGGAGCUGAGUUGGGAGGCUGAGCAAGCAGCAACAGGAGGAAUCAAGGAACAAGGGGGAAAAUGUGAGGGAGGAGGAAACUGGGAUACCUAAGUAAUUUGCUAAUGCGUUUUUAGGCUACCUAUUCCAAUCCCUCAUCGUAUGGUGUACAUUCAGAUUCAGAUAUGAUUGGCUUGAUAUUUAGGAGUCUUUAGAGGCCAAAUCAAGGAAUGCAAAUAACUAUGGAGUUGUACAGGGUUCCUUAAGCCCUCUAUUAAGUUCAACCAUAACUCGAGCUGUCAACUUGCAAGGGUUUUCAUCCUGUCUAUAUGGUCAAAUAUUGCCAGUCUGUAACUAAAUGUUGUAAGCCUGUGAGAUAGUUGCCAGACACUUAUAAUCGGUAGGUCACCCAAGAUACAAGUACAAAGCAAGAGAUAUUCAUCAAAGGGUACACAACAAUUUUGUAGGACAGCCAUGGUAUCUGAUUAUUCUCAAUUGUUCUUGAUCUUCAGACAAGUGAAAAAUCGUUGGUCAGUUUGAAGGAACAAAUUUCCUCUUGCAAAAUACCUAUUCCUGUCUAGAGGGCCAAUGCACUAUCCUCAGCUCAGGAAAACAUAAUGGAUGAAGCUGUCAAUUGUUCCACUGAGGAACAAACACAAGAUAAGAUAAUAGUGAACAUUCAUACUGCAUUGAUCUCUGCUCCGAGUUCUAAGCAAGAGAUGGGCCAAAUGACAUGCAUUUGUAGCUCAUCUCCUGAUGAAGGUGGUCAUCCCAGAGCUUCAGUAUUGUGCGAGCUAUUCUGAGAUACACUGCCACUGGAGUCGCUCAAAUAUUUGGGGCUCCCAUGUAAUAUUAUCCCACCUACCAUGGCAAGAAGCUGUCUCAAAUAUAGCAAUGCUCACGCUUCGGCCACUCUUUGUUUUGUGGUGGGAAGAUAAGACCAAGGAUAUGUUCAUCUGUAUUGGCCUGGGGAUCGACCAACUGAUGUUCUAGCUAUUGCUAGCUCACCAUGUCUAAUAGGCAAAUACUAAAUGAUCCGUAUCGCCGAUUCAUAAUAUUGAGCUUCUAAAAAUUAUCCCUACAAAGGAUUGUGCAUAUUCAGUCAAUGGUGCUUGCCAUUUCUGAAACCAGGCUACUUUCACUAAAUGGCACAAAAUGCCCCUUUGUGUUAUUUGCGAUAGCUGCAACUGUUGUGAUCGGAGAUGUUUUGCGAUAUAGUUACUACAUGCAUUGAUUCUUCCAUGCCA
Sequence
(XR_001541736.2):
GAAUCGGUCGUCGCUCAUCUCCCCACGUCGCAUCCCGUCGUCCCCAUCGAGCGAUCCCCUUCCUCCCUGAUUUCUCCGUCUAGAGGCGGCAUCGAUGCUCCUCGCCUCCAAGAUCUUCCAUCGUAGGUCGUCGCCCACGACGGCUUGCCAUCUGCUAUCCCGUGCCCAGAUGUUGGAUGCAUGAUCUCCUCCGUCGGCACAAUCCGUGUAGCCGCAUCCAUCGGCGUUCGUCUCCCCGUACGGUGGCGACCGGAUUGGCCACUGACCAGUGCCUCCUCUCCGUACACGAGAGUUGGGUUUUCUUAUGUUCAAGCUCCCUCCUCGGUUGCUCCGUUCAUCUUCACUGGAUUUCUCUGGUGAGUCUGCUGCAUUCUUUGCCUUCUUUUAUCCCCUUCCUUCACCCUUCUCUGGUCAACUACAUCAGUGGCUGCAAGCCUGCAAGAUGGAGCUGAGUUGGGAGGCUGAGCAAGCAGCAACAGGAGGAAUCAAGGAACAAGGGGGAAAAUGUGAGGGAGGAGGAAACUGGGAUACCUAAGUAAUUUGCUAAUGCGUUUUUAGGCUACCUAUUCCAAUCCCUCAUCGUAUGGUGUACAUUCAGAUUCAGAUAUGAUUGGCUUGAUAUUUAGGAGUCUUUAGAGGCCAAAUCAAGGAAUGCAAAUAACUAUGGAGUUGUACAGGGUUCCUUAAGCCCUCUAUUAAGUUCAACCAUAACUCGAGCUGUCAACUUGCAAGGGUUUUCAUCCUGUCUAUAUGGUCAAAUAUUGCCAGUCUGUAACUAAAUGUUGUAAGCCUGUGAGAUAGUUGCCAGACACUUAUAAUCGGUAGGUCACCCAAGAUACAAGUACAAAGCAAGAGAUAUUCAUCAAAGGGUACACAACAAUUUUGUAGCCAUGGUAUCUGAUUAUUCUCAAUUGUUCUUGAUCUUCAGACAAGUGAAAAAUCGUUGGUCAGUUUGAAGGAACAAAUUUCCUCUUGCAAAAUACCUAUUCCUGUCUAGAGGGCCAAUGCACUAUCCUCAGCUCAGGAAAACAUAAUGGAUGAAGCUGUCAAUUGUUCCACUGAGGAACAAACACAAGAUAAGAUAAUAGUGAACAUUCAUACUGCAUUGAUCUCUGCUCCGAGUUCUAAGCAAGAGAUGGGCCAAAUGACAUGCAUUUGUAGCUCAUCUCCUGAUGAAGGUGGUCAUCCCAGAGCUUCAGUAUUGUGCGAGCUAUUCUGAGAUACACUGCCACUGGAGUCGCUCAAAUAUUUGGGGCUCCCAUGUAAUAUUAUCCCACCUACCAUGGCAAGAAGCUGUCUCAAAUAUAGCAAUGCUCACGCUUCGGCCACUCUUUGUUUUGUGGUGGGAAGAUAAGACCAAGGAUAUGUUCAUCUGUAUUGGCCUGGGGAUCGACCAACUGAUGUUCUAGCUAUUGCUAGCUCACCAUGUCUAAUAGGCAAAUACUAAAUGAUCCGUAUCGCCGAUUCAUAAUAUUGAGCUUCUAAAAAUUAUCCCUACAAAGGAUUGUGCAUAUUCAGUCAAUGGUGCUUGCCAUUUCUGAAACCAGGCUACUUUCACUAAAUGGCACAAAAUGCCCCUUUGUGUUAUUUGCGAUAGCUGCAACUGUUGUGAUCGGAGAUGUUUUGCGAUAUAGUUACUACAUGCAUUGAUUCUUCCAUGCCA
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
1
NEP:
0.2%
LE_num:
0
LEP:
0.0%
ME_num:
MEP:
1.83%
HE_num:
HEP:
97.97%
Type:
HCR (High-Capacity ncRNA)
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
root
Tau :
0.57
Avg Expression:
34.19
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
Num. | Condition | log2(FoldChange) | Padj |
---|---|---|---|
1 | Amaroo // embryo // dry seed 0 h--/--Amaroo // coleoptile // 3dN | 1.40457631051191 | 2.26182105390756e-15 |
2 | Amaroo // embryo // dry seed 0 h--/--Amaroo // coleoptile // 4dN | 1.42898673877626 | 1.35123696601892e-14 |
3 | Amaroo // embryo // dry seed 0 h--/--Amaroo // coleoptile // 3dN1dA | 1.13299843852509 | 1.06442609855406e-08 |
4 | Amaroo // embryo // dry seed 0 h--/--Amaroo // coleoptile // 3dA | 1.16108521351405 | 5.06106997034605e-11 |