OSA-LNC4352787


Function Link


Basic Info

Chr:

Chr12

Start:

26081689

End:

26086869

Strand:

-

Ref_name:

LOC4352787

Sequence
(XR_001542029.2):

CCUUGCGUGAGGCUCAUUGUUGUUGGGCCGGUUGAUUUAUGGGCCUUUUGUUUCUUCUCGGCGGCGCGUGGCUCUCCCGGCGCCGGCGCGCCGCCGCCGGCGGCCACUCUCCUCCCGCUCGCCGCAGCUGCUCUCAGAUCUCCCCCUUACUGGGACUCGCUCCGUUGCUGCCUCCUCCCCAUCCAAAUCGUGGAGAUCUUUCUUCGGGUAUCAGGAUCUUCCUUUGGGAAAUCGACUGGCUCGCGACGGCGACGCGAUCGGGGUCGGGUCUCCGGUGGCUGGCUGGUCGCGGCCCACGGUUGGAUGGAUUGACGGAGGGGAGGAGGGGGGAAUCGGUGGUUCAGAUCAAGCAAGCAAGCGAAGCAAGUUUCUUUCGGGCACCGGAUGCGAACUCCGGAGUUCAGAUCAGAUCAGAAUUGUGCGAGACGUUGAUGAAUGAAUGUAAGCAAGAGCCUCUGCUGAUUGUGUAGCAAUAUUCAGUCGAAGAUCCAGUGGGAUUGGUGUUCGGUGAUCAUUGCCAUGAAGGAACUCAGAGAGGGUUCCGUUGGAAACGAACUCAUACACCAACAUCGGUACAUCUACCUCCAAACAGCAACCAAGUAACCUCACAAUGUUCCUAUGAUUAAUUUGUGACAAUAUUAUUAUCUCAUUGACGAAUUCUUCUCGGCAGUCAUCGUCAAUUACUUUGGACUUCUUUAUGGCAACUUCUUUGUCACCAUCCAAAGUUCCUCUGUAGACCAUUCCAUGACCACCACAUCCUAGAACUCGAUCAUCGCUAUAGUUCUCUGUUGCUUUCUUGAUUUCCUUCUCUGUAAGUAUAAGAAUGGUGUCAACUUGUCUUGACCUCAUCUCAUCAAAUAGUCUAAGACCUCCAUUUUGUUUGAAAUACUCCUCCUUUUCUUUCCUAUAUUUUCUUCUUUGUAAUUUCAUGACCAGCAAGCAUAUCAAAGCCAUCAGCACAACUGCGGAAACACUGAGACCUGCAGAAUGAUUUUUCAAGAUGAAUCAACUCAUCGUAAACCUGAAAAAGCUCAUUAGUUUCACCCAAAGGUAUACUCUCUGAGUCUCAUUAAGUCCUUACCUGCUAUCACUCGUUCAACUUGGUUAAGCACAGUUUGACAUCCAUAGUUUGUUCCAUCUGGCCUUUUACCUACCCCGCAUUUGCACAAAUAGUUUCCUGGUAUGUUCUGGCACAUCCCAUGUCUGCAGGGAUAUAGCUCUUUAUACUUGGGAUCCUCCUUACGCAACUUGCACUCAUCUAUGUCUGAAUAGAAUUGAAACAGACAAGUAUGUAUUUGGGAUAAUACAAUCAAAGCUUGAACUAUUUUGGCUUGUUACGGAAGCUGAAAAAAAGGUACUCCCUCCGUCCCAAAAUAUAACAACUUUUAGCACUUAGGAUUUGUUACAAAAUAUAGCAACUUCUUCACCAACAUUCCAUUCCCAACCAAUCACAACCCUCCACCAUUCACUUUUCCCACCUACCUCCACUUUUCAACCAAUUACAACCUCUUCCUAUUUAAUUCUACACACUUUCUUAAUAACCGUGUCUAACUCUAAAACUACUUAUAUUCUGGGAUGGAGGGAGUAACAAAAAGAAUAAAUAUUACGCAGCAGCAUUAAAACUGGCUAUAAUUAUGUUCUGGUUAUGUUGUUAUUCCUGGAGUUGUUUAUCUUGGUCUCCAAAUAUAAUCUAGAGAAAGUUUAUAUGUAUGUUACCUUGACAGCCUUUGGGAAGAUAAGGAUUCCCUUCAUAUCCUUCAGAGCAUUUGCACAGGUACCCUUGGCUAUUACUUGCUUGCACACACUUGCUGUUUGAACUGACACAGGCAUAGUCUUUGGGCACCUUCUUCCCCUCUGGGCAGGAGCCAUUCCUGAUGGCCCAGUCAUGGAUGACAGGAACACCUCUGUUGGCCCUCCCAUUGACAAACCUGAGGUGCCCAACGAGGUCUUGCUGCCUGAAGCUGUACCAUCCGGCCUCCACAAGCAUGGCGUAGAAGCAUGGGUUGAAUUCCCACACCGCGCUCUGGUUCAUCACCAAGAUCGCUGCGAAGUCCUUCAGGUCUGGGAUGAUGGUGGUCUCGCAGCAGCCCAUCCCAGUGCAGGGAGCACCGUUGGAUGUGCUGUUGAUGCUCUGGCAGUAGGAGUAGCAGCCAGCCACAUAUAGAUUAGAGUUGCUGUGCAUGUAGCCACCAAUGAUGCCGAGGGUAUGGCAUCCGAUGGCCAUGAAGCGGUUGCGGGUGGUGGAAGGGACGAACGGCGUACCCUCCAGGGUGAACCCUGUGGUAUGGUUCUCUGGUAUGGUGGUGUUUGAUGAGAAACAGAUGUAACUGACUGGACCGUAAACGCGCACCUCGCCACGCUCCAGGGAGAUGUCGAUGACCUCUGUUUCUGAUAGGAGGUCUCUAACCAUAGGCCGUGGUGGCUGGAAGGUGUCGUUGCAGGUGAUGGUGAAGUAGCUGCUCAGGCUGGUCGCAGAACAACCAGCGCCGAUGCCAAAUGGGUAAGGGAUGGAUACAUUUCCGCACUUGCCAGGGCAGCCUGGCAAUGAAAUUGCAGGUUCAGAGGUGGUGGUUGAUAUCGCCAUUGCAUGGAAGACGAUGAGCAUGAGGAGAACGGAUGCUUCUUGCAUGGUUGCGGAGUUGGAGGUUCUUCCCAGCUCCCUACACAUGAAGUUGUCUUGGAAGUUGGAACCACUGAUGCUCUAUGUAAGGCUGACUUAGUUAAGGGGAAAACGAUGAAAGCUUCAGCUAAUUAAUCAGCUCCUAAAUUCUGAGCACAUAUAAAGCCAACCCACACUAUGGUUACCGAAGUUUCGAAAUUUUAAGGUUCCGUUGUUUUUCCAAUGUAUACCACAUUAUUUGUAUUGGAUCAGAAAGAAAAUUUCAUUUCCACAAAUAGUCAUUGUCCGACUCCAAUUAACACCGAUGCCUGAAUAUCCCAGACAAUUAGUGUAUGAACUCUGAAAUUGGGUAUGAGUUCUGAGGUGUAUAUCUUCCUCUGAAUUUUUUCCUCCACUUGUAAUUUAUAGAUUAUACUUCUAACAGUGAUCAGGAGCACUGUAAAUUUCUUACUUUGGAUUACUA

Sequence
(XR_003240161.1):

GAUAACGCCUCAUUUCCAUUCAAAGUAUCAUUGUACAGAGCCUUCUUUCUGGUCAUGAUCUCUAAAAGAACAACUCCGAAACUGUAGGUAUCGCUUUUGUCAGUAAGAUGGUGACUGACAAAAGUCUCAGGGUCAAGAAUUGUGCGAGACGUUGAUGAAUGAAUGUAAGCAAGAGCCUCUGCUGAUUGUGUAGCAAUAUUCAGUCGAAGAUCCAGUGGGAUUGGUGUUCGGUGAUCAUUGCCAUGAAGGAACUCAGAGAGGGUUCCGUUGGAAACGAACUCAUACACCAACAUCGGUACAUCUACCUCCAAACAGCAACCAAGUAACCUCACAAUGUUCCUAUGAUUAAUUUGUGACAAUAUUAUUAUCUCAUUGACGAAUUCUUCUCGGCAGUCAUCGUCAAUUACUUUGGACUUCUUUAUGGCAACUUCUUUGUCACCAUCCAAAGUUCCUCUGUAGACCAUUCCAUGACCACCACAUCCUAGAACUCGAUCAUCGCUAUAGUUCUCUGUUGCUUUCUUGAUUUCCUUCUCUGUAAGUAUAAGAAUGGUGUCAACUUGUCUUGACCUCAUCUCAUCAAAUAGUCUAAGACCUCCAUUUUGUUUGAAAUACUCCUCCUUUUCUUUCCUAUAUUUUCUUCUUUGUAAUUUCAUGACCAGCAAGCAUAUCAAAGCCAUCAGCACAACUGCGGAAACACUGAGACCUGCAGAAUGAUUUUUCAAGAUGAAUCAACUCAUCGUAAACCUGAAAAAGCUCAUUAGUUUCACCCAAAGGUAUACUCUCUGAGUCUCAUUAAGUCCUUACCUGCUAUCACUCGUUCAACUUGGUUAAGCACAGUUUGACAUCCAUAGUUUGUUCCAUCUGGCCUUUUACCUACCCCGCAUUUGCACAAAUAGUUUCCUGGUAUGUUCUGGCACAUCCCAUGUCUGCAGGGAUAUAGCUCUUUAUACUUGGGAUCCUCCUUACGCAACUUGCACUCAUCUAUGUCUGAAUAGAAUUGAAACAGACAAGUAUGUAUUUGGGAUAAUACAAUCAAAGCUUGAACUAUUUUGGCUUGUUACGGAAGCUGAAAAAAAGGUACUCCCUCCGUCCCAAAAUAUAACAACUUUUAGCACUUAGGAUUUGUUACAAAAUAUAGCAACUUCUUCACCAACAUUCCAUUCCCAACCAAUCACAACCCUCCACCAUUCACUUUUCCCACCUACCUCCACUUUUCAACCAAUUACAACCUCUUCCUAUUUAAUUCUACACACUUUCUUAAUAACCGUGUCUAACUCUAAAACUACUUAUAUUCUGGGAUGGAGGGAGUAACAAAAAGAAUAAAUAUUACGCAGCAGCAUUAAAACUGGCUAUAAUUAUGUUCUGGUUAUGUUGUUAUUCCUGGAGUUGUUUAUCUUGGUCUCCAAAUAUAAUCUAGAGAAAGUUUAUAUGUAUGUUACCUUGACAGCCUUUGGGAAGAUAAGGAUUCCCUUCAUAUCCUUCAGAGCAUUUGCACAGGUACCCUUGGCUAUUACUUGCUUGCACACACUUGCUGUUUGAACUGACACAGGCAUAGUCUUUGGGCACCUUCUUCCCCUCUGGGCAGGAGCCAUUCCUGAUGGCCCAGUCAUGGAUGACAGGAACACCUCUGUUGGCCCUCCCAUUGACAAACCUGAGGUGCCCAACGAGGUCUUGCUGCCUGAAGCUGUACCAUCCGGCCUCCACAAGCAUGGCGUAGAAGCAUGGGUUGAAUUCCCACACCGCGCUCUGGUUCAUCACCAAGAUCGCUGCGAAGUCCUUCAGGUCUGGGAUGAUGGUGGUCUCGCAGCAGCCCAUCCCAGUGCAGGGAGCACCGUUGGAUGUGCUGUUGAUGCUCUGGCAGUAGGAGUAGCAGCCAGCCACAUAUAGAUUAGAGUUGCUGUGCAUGUAGCCACCAAUGAUGCCGAGGGUAUGGCAUCCGAUGGCCAUGAAGCGGUUGCGGGUGGUGGAAGGGACGAACGGCGUACCCUCCAGGGUGAACCCUGUGGUAUGGUUCUCUGGUAUGGUGGUGUUUGAUGAGAAACAGAUGUAACUGACUGGACCGUAAACGCGCACCUCGCCACGCUCCAGGGAGAUGUCGAUGACCUCUGUUUCUGAUAGGAGGUCUCUAACCAUAGGCCGUGGUGGCUGGAAGGUGUCGUUGCAGGUGAUGGUGAAGUAGCUGCUCAGGCUGGUCGCAGAACAACCAGCGCCGAUGCCAAAUGGGUAAGGGAUGGAUACAUUUCCGCACUUGCCAGGGCAGCCUGGCAAUGAAAUUGCAGGUUCAGAGGUGGUGGUUGAUAUCGCCAUUGCAUGGAAGACGAUGAGCAUGAGGAGAACGGAUGCUUCUUGCAUGGUUGCGGAGUUGGAGGUUCUUCCCAGCUCCCUACACAUGAAGUUGUCUUGGAAGUUGGAACCACUGAUGCUCUAUGUAAGGCUGACUUAGUUAAGGGGAAAACGAUGAAAGCUUCAGCUAAUUAAUCAGCUCCUAAAUUCUGAGCACAUAUAAAGCCAACCCACACUAUGGUUACCGAAGUUUCGAAAUUUUAAGGUUCCGUUGUUUUUCCAAUGUAUACCACAUUAUUUGUAUUGGAUCAGAAAGAAAAUUUCAUUUCCACAAAUAGUCAUUGUCCGACUCCAAUUAACACCGAUGCCUGAAUAUCCCAGACAAUUAGUGUAUGAACUCUGAAAUUGGGUAUGAGUUCUGAGGUGUAUAUCUUCCUCUGAAUUUUUUCCUCCACUUGUAAUUUAUAGAUUAUACUUCUAACAGUGAUCAGGAGCACUGUAAAUUUCUUACUUUGGAUUACUA


Expression Capacity

HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.

HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.


NE_num:

1

NEP:

0.2%

LE_num:

11

LEP:

2.24%

ME_num:

402

MEP:

81.71%

HE_num:

78

HEP:

15.85%

Type:

HCR (High-Capacity ncRNA)


Tissue Specific Expression

cutoff: tau > 0.9 and Average expression in the tissue > 10


Tissue :

caryopsis

Tau :

0.57

Avg Expression:

6.17

Tip: OSA-LNC4352787 is not a tissue-specific expression ncRNA.

Differential Expression

cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01


Num. Condition log2(FoldChange) Padj
Tip: OSA-LNC4352787 is not a differential expression ncRNA.