OSA-LNC4351841


Function Link


Basic Info

Chr:

Chr12

Start:

7340869

End:

7344874

Strand:

-

Ref_name:

LOC4351841

Sequence
(XR_001541725.2):

CCUCUCGCGUUUCGCCCGCAGCCUUGCACGCCCUCGCCUUCCUCCCCUCGCGCAACCACGCGCACCGCCUCGCCCUUCUCCCUUCGCGAACACCGUCACCGCCGCAUCCUCGCCCACCUACAGCCAUCGUCGCCGCGCCGCCACUGCCGCCUCUUCCUCUCUUCAAUCUCGGCCCCGCCAGGCUGCCACCGCCUCCCUUUCCUCGCCCACUCCGCUUCGCUCUGCCAUAUCCGGCUCAGUGGUUGCCAGAUCCAGUAAGAGGAGCCUGGGAGGAGAAGGGAAGUUGAGAGGGACGCCAUCGCCUGGAGCGAGACACGCCCCAGCCGUGGCCCCGCGUCCGUCGCUCGCUGCGAGACAUGCUUUCCGCCCCGGUCGGUGCGGCGCCAAAUCCGCCUCGGGGAAAUCGGCUGACUCGCCGAUGUAUCCGGCUGCCCGGAGACGACGGACAUAAGCCGCCGCCAUAGUCCUCUUCUUCUCUCCCUCUUUGCGCUACUUGAUGUGCUGGUUCUUGCUCAAGGUCCACCAGAUCCGGUAGAAAGAGGUGGUAGGAGCAGUGGGCUCAGUGACGAGGUCAGGGAAGAGAAGGAAGGAGAAGGGCAGCUCAGUCAUGGCUGCCACGAGGACAGAUGUGGGUCGGCAGCUACUACGGCAAGGCCAGCGCCCAGUGCCACAUGUGCCGUUGUACAUGGCGCCUCGCCGCCCUCGCUUCCUCCAGUUGAAUCUCUUCUCCGUACUCUUCAGGUGAGUUUGAGAGCCACUAACCUGACCUUGCCAUAACUAAGUUUAGGCUAGUUGAGACAUGGUGGCAUAAGUGUGGCUUAGAAAUAGUUGGCCACAAGUGUGGCAAGCUUAGCUUCAAAUUUGAGAGUAUGACAUGUGGGUCCUAAGGCUAUGAAAGUGUGGCAUGACACAAUUGCCGUAACGAACCAAACACAUAUCUAAAAAAUUAUGGCAUACUUCCUCCGUUUCACAAUAUAAGUCAUUCUAACAUUUUCCACAUUCAUUUUGAUGUUAAUGAAUCUAAAUAGAUAUAUAUGUCUAGAUUCAUUAACAUCAAUAUGAAUAUGGGAAAUGCUAGAAUGACUUACAUUGUGAAACGGAGGGAAUAACUAAAGUGUGGUGUGGCAAAGUGUGGCAACCAACCAAACAACCCCUAAGCCAUGCUUCUUCUCCUAGCUAUGCUAACGGUUACUGGCUACUGUUACUACUGCUUGCUAUUUUACUGUUGUUGUAUUUCACGGAUAUUUGAUUUGGGCAUAGUUACUAUUGAUUAGGAUCUCACUAAUGCAGAUUUAAAGUAACUCAUGUGCUCAUCCAUUCCAUUGAAAAAUGGAACUUGCGCUGAGUUGGUGAUCUUUAGAUAUUACCGAUAAUACAAAUGUCUUUUUAAGUUUUUAUUUGUUGCAGUGUGUUAUUGGAAUGAGGGUCUUUUGGACUUGCUCUUGCCUAGAGCAACCGCUGAUUUUUCCCUCAUUAUGAACAUAUCAGGAAUGGCCAAUUCAUCACUGAAUAUUUUCUUGAUGUUCAUGAUUCCUAACACUAUGAAGGGAUGGCUGACAAUUUUGACUUUGGAGGGUUCAGUGGAAUCUAUUCAUGUACUGUGACCUGAAAAAUAUGAUAUUAUCAGGGAUUGCCAACUUGCAAAAUUGAUUUGAUUGAUAAGAAAUCCACGUCCCAUUUUCAAUGGCUCAAUGCGCUCAAGAGUCAAGAAUCUGUGCUGGUAAUGGUUGCUACACGAACUUUUCUGCAAUUACAGGUGAAAACAUUACAGCGUACAUUAUAGUUCAUCAUUCUAUCAUCGACAACUAAUAAGACUUUUACGGCUCCUUCGAUUACUCAGGCCUCGGUGCAGCUGUGCCAAUUGGAUUAGCAAUGAAAAUUCCUAGGCGUACUCACACAUUUGCAUGGGAAAACUCAUAUGUGAUUCCAAAACUAAUGUUGCAUCACAUAUCUGUUAUGUAAAUCAAAGUUAACAGUACAGCGAGCUUGAUGUUGCAAAUGUAUUGUCUUACACGAUUUGUCUAUUGCAGUUUUGCUAUAUAUGAAAUGCUUCUUGAAUGCAUCAGAA

Sequence
(XR_001541726.2):

CCCCCUCUCGCGUUUCGCCCGCAGCCUUGCACGCCCUCGCCUUCCUCCCCUCGCGCAACCACGCGCACCGCCUCGCCCUUCUCCCUUCGCGAACACCGUCACCGCCGCAUCCUCGCCCACCUACAGCCAUCGUCGCCGCGCCGCCACUGCCGCCUCUUCCUCUCUUCAAUCUCGGCCCCGCCAGGCUGCCACCGCCUCCCUUUCCUCGCCCACUCCGCUUCGCUCUGCCAUAUCCGGCUCAGUGGUUGCCAGAUCCAGUAAGAGGAGCCUGGGAGGAGAAGGGAAGUUGAGAGGGACGCCAUCGCCUGGAGCGAGACACGCCCCAGCCGUGGCCCCGCGUCCGUCGCUCGCUGCGAGACAUGCUUUCCGCCCCGGUCGGUGCGGCGCCAAAUCCGCCUCGGGGAAAUCGGCUGACUCGCCGAUGUAUCCGGCUGCCCGGAGACGACGGACAUAAGCCGCCGCCAUAGUCCUCUUCUUCUCUCCCUCUUUGCGCUACUUGAUGUGCUGGUUCUUGCUCAAGGUCCACCAGAUCCGGUAGAAAGAGGUGGUAGGAGCAGUGGGCUCAGUGACGAGGUCAGGGAAGAGAAGGAAGGAGAAGGGCAGCUCAGUCAUGGCUGCCACGAGGACAGAUGUGGGUCGGCAGCUACUACGGCAAGGCCAGCGCCCAGUGCCACAUGUGCCGUUGUACAUGGCGCCUCGCCGCCCUCGCUUCCUCCAGUUGAAUCUCUUCUCCGUACUCUUCAGUGUGUUAUUGGAAUGAGGGUCUUUUGGACUUGCUCUUGCCUAGAGCAACCGCUGAUUUUUCCCUCAUUAUGAACAUAUCAGGAAUGGCCAAUUCAUCACUGAAUAUUUUCUUGAUGUUCAUGAUUCCUAACACUAUGAAGGGAUGGCUGACAAUUUUGACUUUGGAGGGUUCAGUGGAAUCUAUUCAUGUACUGUGACCUGAAAAAUAUGAUAUUAUCAGGGAUUGCCAACUUGCAAAAUUGAUUUGAUUGAUAAGAAAUCCACGUCCCAUUUUCAAUGGCUCAAUGCGCUCAAGAGUCAAGAAUCUGUGCUGGUAAUGGUUGCUACACGAACUUUUCUGCAAUUACAGGUGAAAACAUUACAGCGUACAUUAUAGUUCAUCAUUCUAUCAUCGACAACUAAUAAGACUUUUACGGCUCCUUCGAUUACUCAGGCCUCGGUGCAGCUGUGCCAAUUGGAUUAGCAAUGAAAAUUCCUAGGCGUACUCACACAUUUGCAUGGGAAAACUCAUAUGUGAUUCCAAAACUAAUGUUGCAUCACAUAUCUGUUAUGUAAAUCAAAGUUAACAGUACAGCGAGCUUGAUGUUGCAAAUGUAUUGUCUUACACGAUUUGUCUAUUGCAGUUUUGCUAUAUAUGAAAUGCUUCUUGAAUGCAUCAGAA

Sequence
(XR_001541727.2):

CCCUCUCGCGUUUCGCCCGCAGCCUUGCACGCCCUCGCCUUCCUCCCCUCGCGCAACCACGCGCACCGCCUCGCCCUUCUCCCUUCGCGAACACCGUCACCGCCGCAUCCUCGCCCACCUACAGCCAUCGUCGCCGCGCCGCCACUGCCGCCUCUUCCUCUCUUCAAUCUCGGCCCCGCCAGGCUGCCACCGCCUCCCUUUCCUCGCCCACUCCGCUUCGCUCUGCCAUAUCCGGCUCAGUGGUUGCCAGAUCCAGUAAGAGGAGCCUGGGAGGAGAAGGGAAGUUGAGAGGGACGCCAUCGCCUGGAGCGAGACACGCCCCAGCCGUGGCCCCGCGUCCGUCGCUCGCUGCGAGACAUGCUUUCCGCCCCGGUCGGUGCGGCGCCAAAUCCGCCUCGGGGAAAUCGGCUGACUCGCCGAUGUAUCCGGCUGCCCGGAGACGACGGACAUAAGCCGCCGCCAUAGUCCUCUUCUUCUCUCCCUCUUUGCGCUACUUGAUGUGCUGGUUCUUGCUCAAGGUCCACCAGAUCCGGUAGAAAGAGGUGGUAGGAGCAGUGGGCUCAGUGACGAGGUCAGGGAAGAGAAGGAAGGAGAAGGGCAGCUCAGUCAUGGCUGCCACGAGGACAGAUGUGGGUCGGCAGCUACUACGGCAAGGCCAGCGCCCAGUGCCACAUGUGCCGUUGUACAUGGCGCCUCGCCGCCCUCGCUUCCUCCAGUUGAAUCUCUUCUCCGUACUCUUCAGGAAUGGCCAAUUCAUCACUGAAUAUUUUCUUGAUGUUCAUGAUUCCUAACACUAUGAAGGGAUGGCUGACAAUUUUGACUUUGGAGGGUUCAGUGGAAUCUAUUCAUGUACUGUGACCUGAAAAAUAUGAUAUUAUCAGGGAUUGCCAACUUGCAAAAUUGAUUUGAUUGAUAAGAAAUCCACGUCCCAUUUUCAAUGGCUCAAUGCGCUCAAGAGUCAAGAAUCUGUGCUGGUAAUGGUUGCUACACGAACUUUUCUGCAAUUACAGGUGAAAACAUUACAGCGUACAUUAUAGUUCAUCAUUCUAUCAUCGACAACUAAUAAGACUUUUACGGCUCCUUCGAUUACUCAGGCCUCGGUGCAGCUGUGCCAAUUGGAUUAGCAAUGAAAAUUCCUAGGCGUACUCACACAUUUGCAUGGGAAAACUCAUAUGUGAUUCCAAAACUAAUGUUGCAUCACAUAUCUGUUAUGUAAAUCAAAGUUAACAGUACAGCGAGCUUGAUGUUGCAAAUGUAUUGUCUUACACGAUUUGUCUAUUGCAGUUUUGCUAUAUAUGAAAUGCUUCUUGAAUGCAUCAGAA

Sequence
(XR_003240072.1):

CCCUCUCGCGUUUCGCCCGCAGCCUUGCACGCCCUCGCCUUCCUCCCCUCGCGCAACCACGCGCACCGCCUCGCCCUUCUCCCUUCGCGAACACCGUCACCGCCGCAUCCUCGCCCACCUACAGCCAUCGUCGCCGCGCCGCCACUGCCGCCUCUUCCUCUCUUCAAUCUCGGCCCCGCCAGGCUGCCACCGCCUCCCUUUCCUCGCCCACUCCGCUUCGCUCUGCCAUAUCCGGCUCAGUGGUUGCCAGAUCCAGUAAGAGGAGCCUGGGAGGAGAAGGGAAGUUGAGAGGGACGCCAUCGCCUGGAGCGAGACACGCCCCAGCCGUGGCCCCGCGUCCGUCGCUCGCUGCGAGACAUGCUUUCCGCCCCGGUCGGUGCGGCGCCAAAUCCGCCUCGGGGAAAUCGGCUGACUCGCCGAUGUAUCCGGCUGCCCGGAGACGACGGACAUAAGCCGCCGCCAUAGUCCUCUUCUUCUCUCCCUCUUUGCGCUACUUGAUGUGCUGGUUCUUGCUCAAGGUCCACCAGAUCCGGUAGAAAGAGGUGGUAGGAGCAGUGGGCUCAGUGACGAGGUCAGGGAAGAGAAGGAAGGAGAAGGGCAGCUCAGUCAUGGCUGCCACGAGGACAGAUGUGGGUCGGCAGCUACUACGGCAAGGCCAGCGCCCAGUGCCACAUGUGCCGUUGUACAUGGCGCCUCGCCGCCCUCGCUUCCUCCAGUUGAAUCUCUUCUCCGUACUCUUCAGGUGAGUUUGAGAGCCACUAACCUGACCUUGCCAUAACUAAGUUUAGGCUAGUUGAGACAUGGUGGCAUAAGUGUGGCUUAGAAAUAGUUGGCCACAAGUGUGGCAAGCUUAGCUUCAAAUUUGAGAGUAUGACAUGUGGGUCCUAAGGCUAUGAAAGUGUGGCAUGACACAAUUGCCGUAACGAACCAAACACAUAUCUAAAAAAUUAUGGCAUACUUCCUCCGUUUCACAAUAUAAGUCAUUCUAACAUUUUCCACAUUCAUUUUGAUGUUAAUGAAUCUAAAUAGAUAUAUAUGUCUAGAUUCAUUAACAUCAAUAUGAAUAUGGGAAAUGCUAGAAUGACUUACAUUGUGAAACGGAGGGAAUAACUAAAGUGUGGUGUGGCAAAGUGUGGCAACCAACCAAACAACCCCUAAGCCAUGCUUCUUCUCCUAGCUAUGCUAACGGUUACUGGCUACUGUUACUACUGCUUGCUAUUUUACUGUUGUUGUAUUUCACGGAUAUUUGAUUUGGGCAUAGUUACUAUUGAUUAGGAUCUCACUAAUGCAGAUUUAAAGUAACUCAUGUGCUCAUCCAUUCCAUUGAAAAAUGGAACUUGCGCUGAGUUGGUGAUCUUUAGAUAUUACCGAUAAUACAAAUGUCUUUUUAAGUUUUUAUUUGUUGCAGUGUGUUAUUGGAAUGAGGGUCUUUUGGACUUGCUCUUGCCUAGAGCAACCGCUGAUUUUUCCCUCAUUAUGAACAUAUCAGGAAUGGCCAAUUCAUCACUGAAUAUUUUCUUGAUGUUCAUGAUUCCUAACACUAUGAAGGGAUGGCUGACAAUUUUGACUUUGGAGGGUUCAGUGGAAUCUAUUCAUGUACUGUGACCUGAAAAAUAUGAUAUUAUCAGGGAUUGCCAACUUGCAAAAUUGAUUUGAUUGAUAAGAAAUCCACGUCCCAUUUUCAAUGGCUCAAUGCGCUCAAGAGUCAAGAAUCUGUGCUGGUGAAAACAUUACAGCGUACAUUAUAGUUCAUCAUUCUAUCAUCGACAACUAAUAAGACUUUUACGGCUCCUUCGAUUACUCAGGCCUCGGUGCAGCUGUGCCAAUUGGAUUAGCAAUGAAAAUUCCUAGGCGUACUCACACAUUUGCAUGGGAAAACUCAUAUGUGAUUCCAAAACUAAUGUUGCAUCACAUAUCUGUUAUGUAAAUCAAAGUUAACAGUACAGCGAGCUUGAUGUUGCAAAUGUAUUGUCUUACACGAUUUGUCUAUUGCAGUUUUGCUAUAUAUGAAAUGCUUCUUGAAUGCAUCAGAA


Expression Capacity

HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.

HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.


NE_num:

1

NEP:

0.2%

LE_num:

1

LEP:

0.2%

ME_num:

91

MEP:

18.5%

HE_num:

399

HEP:

81.1%

Type:

HCR (High-Capacity ncRNA)


Tissue Specific Expression

cutoff: tau > 0.9 and Average expression in the tissue > 10


Tissue :

shoot_apical_meristem

Tau :

0.59

Avg Expression:

17.35

Tip: OSA-LNC4351841 is not a tissue-specific expression ncRNA.

Differential Expression

cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01


Num. Condition log2(FoldChange) Padj
1Amaroo // embryo // dry seed 0 h--/--Amaroo // coleoptile // 4dA-1.113230268701481.39287431266229e-05
2Amaroo // embryo // dry seed 0 h--/--Amaroo // coleoptile // 3dN1dA-1.299622807538942.91649485266237e-09
3IR64 // leaf // ethanol solvent (untreated control)--/--IR64 // leaf // gibberellic acid (GA)1.058765458282560.0379472762141069
4Nipponbare // leaf // Watered;Short_Day--/--Nipponbare // leaf // Drought;Short_Day1.103232816542642.77127071017696e-05