Chr:
Chr8
Start:
21951626
End:
21955559
Strand:
-
Ref_name:
LOC4345721
Sequence
(XR_001548357.2):
CUAUACGUGAGAAAGCCUCGUCUACCCCUCUCCCUGUAAUUAGUUACUUCUAUAGUUGGCACCCAUCCUUAUCUCUUAUCUCCAAAAUCGAUUCCCCAACCCUAACCUCCCGUUCUCAACGACGGCGCCGCCGCACAGAUCUGGCACUAUCCGGCGAGGCUUGAGCUGCCUGGGGCCGGGCUCCGUCGCCUCCUUUGUCGGCGCACGGACGAAGGAAGCCGAGGCUUUAGUCUAGCGUCGUCCCUUUUCUGUCAGGAAAGGCGAAGGUUAUGGUUCGCCGCCGAACUUCGUCGGCUGAAAUCAUGGCGCCGCCGUGGCUGAUGCCACCUGUGUUCAGCCGGAAGGGGUCCGGCACAUCGCGAGCGUCGCUAUAUAGGGGGCAAAUAGCUCCGAUGCCGGCGAGGUUAUCCUCCGGCGAUGAGGUCUUUGCGGGUUUUCUCAUCAGAACGAGCUGUCAUCGCAUCGUGGCGGAGUUUGGGUUUCUCUGAGACAUGACGGGGAGCACGAGCUUGAGGACCGCGGCGUCGUGGCGGUGUUUGGGUUUCUCUGAGACAGGACGAGGAGCACGAGCUUGAGCUAGGUCCUUCUUUUGAUCUCUGGAUGACCGAGAGAUGCGAGAUGCCACCGACCUGAUUAUUUGGUGGUUGAUCCGUCACUUGAAUUUGCAUGAUCGUCCACAAGCAUUCGGAGCACAUGGGGAAAUAUAUAUGAUUAUGCUACUGGUUUUUCUCCUAUUGCCUCUUCUACUCGGAUCUUCUUCUACUAGAACGAUUAGAAUCACUACAGCGUUCCGAGCACAUGGUGAAAAUGAUUUUGCUACUGGUUAUUUGCCUGUUGUGGUCUUGCUUCUUCUACUUGGUUUAAUAAAUCAAUUAUGAUAUAUCGCUUGAAGGUGAAUAGUCUAUAGGGGAGUGUGAAGUAAACGAGAUGAGUGCUAUACCCAGUUACCCACUGGAGUGGAGAGACAUAUCGCCUCUGCAAGCCUUGGACAAAGUUAUUCAUUCAAUACAUGUUCUUAACCCAAUCUUUCCUGUUGCCAUUUCAAGUACCCAUUUCCAAUCACAGGAAUAACAAUACAGAUGAAGAGGGAGAAGAAAAACAAGCUGUGAAGGCUGCAUAACAACAGGCAGGUUGAUUUGAAAUGCAGAUGAAUCCUUCCAGUUCCAUUCGAUCCCAAUCCAAACUCGGUGUACACAAUAAAUUCAGGAUCCUAAUUGCUUGAAAAAGUAAUGCUUUUUGAUUUUUGACAUCACGGGUAUUAUAAUGUUUAUUUGACAUCACGGGUAGUAUAAUGUUUAUGUGACAGCUUCAAAUCUUCAAUGUUAUAACUAUUUACUUAUUAUUGCUGCAUUCAAGCGAAUAUAUAAAGAAUCCAAUCGACGGCCGAUCUAUGUUACA
Sequence
(XR_001548358.1):
AUACGUGAGAAAGCCUCGUCUACCCCUCUCCCUGUAAUUAGUUACUUCUAUAGUUGGCACCCAUCCUUAUCUCUUAUCUCCAAAAUCGAUUCCCCAACCCUAACCUCCCGUUCUCAACGACGGCGCCGCCGCACAGAUCUGGCACUAUCCGGCGAGGCUUGAGCUGCCUGGGGCCGGGCUCCGUCGCCUCCUUUGUCGGCGCACGGACGAAGGAAGCCGAGGCUUUAGUCUAGCGUCGUCCCUUUUCUGUCAGGAAAGGCGAAGGUUAUGGUUCGCCGCCGAACUUCGUCGGCUGAAAUCAUGGCGCCGCCGUGGCUGAUGCCACCUGUGUUCAGCCGGAAGGGGUCCGGCACAUCGCGAGCGUCGCUAUAUAGGGGGCAAAUAGCUCCGAUGCCGGCGAGGUUAUCCUCCGGCGAUGAGGUCUUUGCGGGUUUUCUCAUCAGAACGAGCUGUCAUCGCAUCGUGGCGGAGUUUGGGUUUCUCUGAGACAUGACGGGGAGCACGAGCUUGAGGACCGCGGCGUCGUGGCGGUGUUUGGGUUUCUCUGAGACAGGACGAGGAGCACGAGCUUGAGCUAGGUCCUUCUUUUGAUCUCUGGAUGACCGAGAGAUGCGAGAUGCCACCGACCUGAUUAUUUGGUGGUUGAUCCGUCACUUGAAUUUGCAUGAUCGUCCACAAGCAUUCGGAGCACAUGGGGAAAUAUAUAUGAUUAUGCUACUGGUUUUUCUCCUAUUGCCUCUUCUACUCGGAUCUUCUUCUACUAGAACGAUUAGAAUCACUACAGCGUUCCGAGCACAUGGUGAAUAGUCUAUAGGGGAGUGUGAAGUAAACGAGAUGAGUGCUAUACCCAGUUACCCACUGGAGUGGAGAGACAUAUCGCCUCUGCAAGCCUUGGACAAAGUUAUUCAUUCAAUACAUGUUCUUAACCCAAUCUUUCCUGUUGCCAUUUCAAGUACCCAUUUCCAAUCACAGGAAUAACAAUACAGAUGAAGAGGGAGAAGAAAAACAAGCUGUGAAGGCUGCAUAACAACAGGCAGGUUGAUUUGAAAUGCAGAUGAAUCCUUCCAGUUCCAUUCGAUCCCAAUCCAAACUCGGUGUACACAAUAAAUUCAGGAUCCUAAUUGCUUGAAAAAGUAAUGCUUUUUGAUUUUUGACAUCACGGGUAUUAUAAUGUUUAUUUGACAUCACGGGUAGUAUAAUGUUUAUGUGACAGCUUCAAAUCUUCAAUGUUAUAACUAUUUACUUAUUAUUGCUGCAUUCAAGCGAAUAUAUAAAGAAUCCAAUCGACGGCCGAUCUAUGUUACA
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
1
NEP:
0.2%
LE_num:
LEP:
6.91%
ME_num:
MEP:
0.61%
HE_num:
HEP:
92.28%
Type:
HCR (High-Capacity ncRNA)
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
2nd_leaf
Tau :
0.58
Avg Expression:
102.58
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
| Num. | Condition | log2(FoldChange) | Padj |
|---|---|---|---|
| 1 | Caidao // leaf // none (control)--/--Caidao // leaf // 0.5% Na2CO3 solution for 36h | -9.13739378706166 | 2.54463318948312e-19 |
| 2 | WD20342 // leaf // none (control)--/--WD20342 // leaf // 0.5% Na2CO3 solution for 36h | -10.1280995354048 | 3.74238203455104e-13 |