Chr:
Chr7
Start:
12652870
End:
12656490
Strand:
-
Ref_name:
LOC4342991
Sequence
(XR_001547138.2):
UUAUCUCUUCCACCCAGCCAGGCCAGGUUCACAGUCCACAGUCAACACUACACUCCACAGCCAGGCAAAGCACCGACGCACGCGCCCCUUCUCUUCCCUCUCCGUGGCGGCAUGGCGGCGUGCCCCCUCCUCCCGCUGCUCCAGCUCUAGCCCUCCCUCCACAACAUCCUGGACAUGGAUCCUCUACCUUUGGCUCGCCGGAGCAAUGGGGCCACCAGACUGCCAGCGAUGAGUCCGGGGGCAUCCAGAUCCAGCGCCACCUCACCCAUGGCAGCUGCUCCGGUGCGACGAUGGCCAGGGGCCGCGCUGCCCUCCUCAUCCCUCCACUGGUUAGUGAAGAAGUUGGGUGAAGAAGGACCCGGGCAAGACUUACAUGCUAGCUGCCUCUCCAUGGCGGAGAACUUGGAGCUUCUAACUGGUAGCUCGGAUUUGAUUUCUAGUGUAGCUAGUGACUAAGACAUACUCCAUCCGUUUCACGAUAACCAAGUGGAGAUAAAAUUCUUGUUUUAUCUAUAUGAUGCAAUUCCUUUCCUUGAGGAUUGCUUCCAUGAGCCACCCAGUACAACACAACUAAAAUCAUAUGGAAAGAUUGGAGCCAUGUUCCAAGAAGUCAUUCCAAAAUUGCAAUGUCUGUUCCAGUACUGAACCAAUCCAGCUCGGCUCCAUUUCAAGCCAUCAUAGGCAUCACCUCAAAGACAUUCUACUCACUGCAAAGCCAGGGAGCCAUUUCUUUCUCUCAAGUUGGCAUGCGUUCCUUUUUCUUAGUUAAAUCAUAAAUUAACAGGCCCAACUUAAUUAUCAUGGAAUAAGCCACAGCAAUUUUACCCACCUAAGGUCACUCUGUGCAUUCAUUUCAGGACAAUGACAAGCAUUGGGAUAGACAAGGCAGUAGAUUCUCAAUCAAUUGGUGCUGUCUAGUAGGUGAAGAGUGACACCGAAGCAGGAUUUGCAAGUCAACUGGCUCAUCUUCAUAUUAUUUGAGGUGUUGUCGGACUGCCUGCAAUGCCAUUCGUCAACUCUUUUCUCGUUUCCCUACCUCCUUGGUUAUCUAACCUUAAGAAGUAAUAUUCAAAUUUCAUCUCAGUUGUAGAUGUCUAUGAGAUUGGCAUUGCUAUUGUAAUUCACAUUAGAUUGUUGUCAAAUCGAUUAAUUGAACGUGGAUGUCAAUGCAUUGGAAUCCAUUCUUCCAUUGUAUGUGUGAUCGCCUAUGAUGUGUUAUUAAGCUCCUACUAUUCUGGUGUAAGCAAAUAAUAUAAAUGUAUCAGCAAACCCAUUUUAGUUUUGCCCUCAA
Sequence
(XR_001547142.2):
CCUCCUUAUCUCUUCCACCCAGCCAGGCCAGGUUCACAGUCCACAGUCAACACUACACUCCACAGCCAGGCAAAGCACCGACGCACGCGCCCCUUCUCUUCCCUCUCCGUGGCGGCAUGGCGGCGUGCCCCCUCCUCCCGCUGCUCCAGCUCUAGCCCUCCCUCCACAACAUCCUGGACAUGGAUCCUCUACCUUUGGCUCGCCGGAGCAAUGGGGCCACCAGACUGCCAGCGAUGAGUCCGGGGGCAUCCAGAUCCAGCGCCACCUCACCCAUGGCAGCUGCUCCGGUGCGACGAUGGCCAGGGGCCGCGCUGCCCUCCUCAUCCCUCCACUGGUUAGUGAAGAAGUUGGGUGAAGAAGGACCCGGGCAAGACUUACAUGCUAGCUGCCUCUCCAUGGCGGAGAACUUGGAGCUUCUAACUGGUAGCUCGGAUUUGAUUUCUAGUGUAGCUAGUGACUAAGACAUACUCCAUCCGUUUCACGAUAACCAAGUGGAGAUAAAAUUCUUGUUUUAUCUAUAUGAUGCAAUUCCUUUCCUUGAGGAUUGCUUCCAUGAGCCACCCAGUACAACACAACUAAAAUCAUAUGGAAAGAUUGGAGCCAUGUUCCAAGAAGUCAUUCCAAAAUUGCAAUGUCUGUUCCAGUACUGAACCAAUCCAGCUCGGCUCCAUUUCAAGCCAUCAUAGGCAUCACCUCAAAGACAUUCUACUCACUGCAAAGCCAGGGAGCCAUUUCUUUCUCUCAAGUUGGCAUGCGUUCCUUUUUCUUAGUUAAAUCAUAAAUUAACAGGCCCAACUUAAUUAUCAUGGAAUAAGCCACAGCAAUUUUACCCACCUAAGGUCACUCUGUGCAUUCAUUUCAGGACAAUGACAAGCAUUGGGAUAGACAAGGCAGUAGAUUCUCAAUCAAUUGGUGCUGUCUAGUAGGUGAAGAGUGACACCGAAGCAGGGAUGGAUGCCGAGCCAGCUCGGCUCGGCUCGGCUCGACUUGCUCUAGCUCGUUUAGAUAACGAGCUGGCUCGGCUCGGCUCAUUAUCUAAACGAGCAGAAAACGCAGCUCGGCUCGGCUCGGUCAGUAGCUCGAGCUAGCUCGUUUCGGCUCGCGAGCUGGAGAGGGCAAGAUAUCAGACAUCAAGAUUAGAAGAGCUAGGACAACGGAACGUGAGCCGACGAGCGGCCUGCAGCGGCGAGGACGAGCACGACGGUCGACGGCAAGGCAGACAGGCAGACCGCAGCGGCGAGUUCGAGUGCGAUGACCGACGACACAAAAAUCUGCGGUGCCAAGGUGACAGCGCACGCGACGGCCAAGCUGGGGCAACGCCGCGACGACCGACGGUGCUGCAGCCCUCAGCGCAGAUUGGCAGAUGGUCGCGACAGGGAGGUGGCGAUGGCGCAAGCACUAGAGACCGGGAAGGAAGGGGCAGCGCGGCGUGGCUGCGAGGUGCAUGCUGGGCGAUGAGCGGCAGACUGGCGGCGGAUAGGCAGAGUGAAAAGGAGAGAUCGAGACUCUCGAGAGGCAGGAUUUGCAAGUCAACUGGCUCAUCUUCAUAUUAUUUGAGGUGUUGUCGGACUGCCUGCAAUGCCAUUCGUCAACUCUUUUCUCGUUUCCCUACCUCCUUGGUUAUCUAACCUUAAGAAGUAAUAUUCAAAUUUCAUCUCAGUUGUAGAUGUCUAUGAGAUUGGCAUUGCUAUUGUAAUUCACAUUAGAUUGUUGUCAAAUCGAUUAAUUGAACGUGGAUGUCAAUGCAUUGGAAUCCAUUCUUCCAUUGUAUGUGUGAUCGCCUAUGAUGUGUUAUUAAGCUCCUACUAUUCUGGUGUAAGCAAAUAAUAUAAAUGUAUCAGCAAACCCAUUUUAGUUUUGCCCUCAA
Sequence
(XR_001547143.2):
UCUCUUCCACCCAGCCAGGCCAGGUUCACAGUCCACAGUCAACACUACACUCCACAGCCAGGCAAAGCACCGACGCACGCGCCCCUUCUCUUCCCUCUCCGUGGCGGCAUGGCGGCGUGCCCCCUCCUCCCGCUGCUCCAGCUCUAGCCCUCCCUCCACAACAUCCUGGACAUGGAUCCUCUACCUUUGGCUCGCCGGAGCAAUGGGGCCACCAGACUGCCAGCGAUGAGUCCGGGGGCAUCCAGAUCCAGCGCCACCUCACCCAUGGCAGCUGCUCCGGUGCGACGAUGGCCAGGGGCCGCGCUGCCCUCCUCAUCCCUCCACUGGUUAGUGAAGAAGUUGGGUGAAGAAGGACCCGGGCAAGACUUACAUGCUAGCUGCCUCUCCAUGAACCAAGUGGAGAUAAAAUUCUUGUUUUAUCUAUAUGAUGCAAUUCCUUUCCUUGAGGAUUGCUUCCAUGAGCCACCCAGUACAACACAACUAAAAUCAUAUGGAAAGAUUGGAGCCAUGUUCCAAGAAGUCAUUCCAAAAUUGCAAUGUCUGUUCCAGUACUGAACCAAUCCAGCUCGGCUCCAUUUCAAGCCAUCAUAGGCAUCACCUCAAAGACAUUCUACUCACUGCAAAGCCAGGGAGCCAUUUCUUUCUCUCAAGUUGGCAUGCGUUCCUUUUUCUUAGUUAAAUCAUAAAUUAACAGGCCCAACUUAAUUAUCAUGGAAUAAGCCACAGCAAUUUUACCCACCUAAGGUCACUCUGUGCAUUCAUUUCAGGACAAUGACAAGCAUUGGGAUAGACAAGGCAGUAGAUUCUCAAUCAAUUGGUGCUGUCUAGUAGGUGAAGAGUGACACCGAAGCAGGAUUUGCAAGUCAACUGGCUCAUCUUCAUAUUAUUUGAGGUGUUGUCGGACUGCCUGCAAUGCCAUUCGUCAACUCUUUUCUCGUUUCCCUACCUCCUUGGUUAUCUAACCUUAAGAAGUAAUAUUCAAAUUUCAUCUCAGUUGUAGAUGUCUAUGAGAUUGGCAUUGCUAUUGUAAUUCACAUUAGAUUGUUGUCAAAUCGAUUAAUUGAACGUGGAUGUCAAUGCAUUGGAAUCCAUUCUUCCAUUGUAUGUGUGAUCGCCUAUGAUGUGUUAUUAAGCUCCUACUAUUCUGGUGUAAGCAAAUAAUAUAAAUGUAUCAGCAAACCCAUUUUAGUUUUGCCCUCAA
Sequence
(XR_001547144.2):
UCUUCCACCCAGCCAGGCCAGGUUCACAGUCCACAGUCAACACUACACUCCACAGCCAGGCAAAGCACCGACGCACGCGCCCCUUCUCUUCCCUCUCCGUGGCGGCAUGGCGGCGUGCCCCCUCCUCCCGCUGCUCCAGCUCUAGCCCUCCCUCCACAACAUCCUGGACAUGGAUCCUCUACCUUUGGCUCGCCGGAGCAAUGGGGCCACCAGACUGCCAGCGAUGAGUCCGGGGGCAUCCAGAUCCAGCGCCACCUCACCCAUGGCAGCUGCUCCGGUGCGACGAUGGCCAGGGGCCGCGCUGCCCUCCUCAUCCCUCCACUGGUUAGUGAAGAAGUUGGGUGAAGAAGGACCCGGGCAAGACUUACAUGCUAGCUGCCUCUCCAUGAAGAUUGGAGCCAUGUUCCAAGAAGUCAUUCCAAAAUUGCAAUGUCUGUUCCAGUACUGAACCAAUCCAGCUCGGCUCCAUUUCAAGCCAUCAUAGGCAUCACCUCAAAGACAUUCUACUCACUGCAAAGCCAGGGAGCCAUUUCUUUCUCUCAAGUUGGCAUGCGUUCCUUUUUCUUAGUUAAAUCAUAAAUUAACAGGCCCAACUUAAUUAUCAUGGAAUAAGCCACAGCAAUUUUACCCACCUAAGGUCACUCUGUGCAUUCAUUUCAGGACAAUGACAAGCAUUGGGAUAGACAAGGCAGUAGAUUCUCAAUCAAUUGGUGCUGUCUAGUAGGUGAAGAGUGACACCGAAGCAGGAUUUGCAAGUCAACUGGCUCAUCUUCAUAUUAUUUGAGGUGUUGUCGGACUGCCUGCAAUGCCAUUCGUCAACUCUUUUCUCGUUUCCCUACCUCCUUGGUUAUCUAACCUUAAGAAGUAAUAUUCAAAUUUCAUCUCAGUUGUAGAUGUCUAUGAGAUUGGCAUUGCUAUUGUAAUUCACAUUAGAUUGUUGUCAAAUCGAUUAAUUGAACGUGGAUGUCAAUGCAUUGGAAUCCAUUCUUCCAUUGUAUGUGUGAUCGCCUAUGAUGUGUUAUUAAGCUCCUACUAUUCUGGUGUAAGCAAAUAAUAUAAAUGUAUCAGCAAACCCAUUUUAGUUUUGCCCUCAA
Sequence
(XR_001547145.2):
UCUUCCACCCAGCCAGGCCAGGUUCACAGUCCACAGUCAACACUACACUCCACAGCCAGGCAAAGCACCGACGCACGCGCCCCUUCUCUUCCCUCUCCGUGGCGGCAUGGCGGCGUGCCCCCUCCUCCCGCUGCUCCAGCUCUAGCCCUCCCUCCACAACAUCCUGGACAUGGAUCCUCUACCUUUGGCUCGCCGGAGCAAUGGGGCCACCAGACUGCCAGCGAUGAGUCCGGGGGCAUCCAGAUCCAGCGCCACCUCACCCAUGGCAGCUGCUCCGGUGCGACGAUGGCCAGGGGCCGCGCUGCCCUCCUCAUCCCUCCACUGGUUAGUGAAGAAGUUGGGUGAAGAAGGACCCGGGCAAGACUUACAUGCUAGCUGCCUCUCCAUGAUUGGAGCCAUGUUCCAAGAAGUCAUUCCAAAAUUGCAAUGUCUGUUCCAGUACUGAACCAAUCCAGCUCGGCUCCAUUUCAAGCCAUCAUAGGCAUCACCUCAAAGACAUUCUACUCACUGCAAAGCCAGGGAGCCAUUUCUUUCUCUCAAGUUGGCAUGCGUUCCUUUUUCUUAGUUAAAUCAUAAAUUAACAGGCCCAACUUAAUUAUCAUGGAAUAAGCCACAGCAAUUUUACCCACCUAAGGUCACUCUGUGCAUUCAUUUCAGGACAAUGACAAGCAUUGGGAUAGACAAGGCAGUAGAUUCUCAAUCAAUUGGUGCUGUCUAGUAGGUGAAGAGUGACACCGAAGCAGGAUUUGCAAGUCAACUGGCUCAUCUUCAUAUUAUUUGAGGUGUUGUCGGACUGCCUGCAAUGCCAUUCGUCAACUCUUUUCUCGUUUCCCUACCUCCUUGGUUAUCUAACCUUAAGAAGUAAUAUUCAAAUUUCAUCUCAGUUGUAGAUGUCUAUGAGAUUGGCAUUGCUAUUGUAAUUCACAUUAGAUUGUUGUCAAAUCGAUUAAUUGAACGUGGAUGUCAAUGCAUUGGAAUCCAUUCUUCCAUUGUAUGUGUGAUCGCCUAUGAUGUGUUAUUAAGCUCCUACUAUUCUGGUGUAAGCAAAUAAUAUAAAUGUAUCAGCAAACCCAUUUUAGUUUUGCCCUCAA
Sequence
(XR_001547146.2):
AUCUCUUCCACCCAGCCAGGCCAGGUUCACAGUCCACAGUCAACACUACACUCCACAGCCAGGCAAAGCACCGACGCACGCGCCCCUUCUCUUCCCUCUCCGUGGCGGCAUGGCGGCGUGCCCCCUCCUCCCGCUGCUCCAGCUCUAGCCCUCCCUCCACAACAUCCUGGACAUGGAUCCUCUACCUUUGGCUCGCCGGAGCAAUGGGGCCACCAGACUGCCAGCGAUGAGUCCGGGGGCAUCCAGAUCCAGCGCCACCUCACCCAUGGCAGCUGCUCCGGUGCGACGAUGGCCAGGGGCCGCGCUGCCCUCCUCAUCCCUCCACUGGUUAGUGAAGAAGUUGGGUGAAGAAGGACCCGGGCAAGACUUACAUGCUAGCUGCCUCUCCAUGAACCAAGUGGAGAUAAAAUUCUUGUUUUAUCUAUAUGAUGCAAUUCCUUUCCUUGAGGAUUGCUUCCAUGAGCCACCCAGUACAACACAACUAAAAUCAUAUGGAAUUGGAGCCAUGUUCCAAGAAGUCAUUCCAAAAUUGCAAUGUCUGUUCCAGUACUGAACCAAUCCAGCUCGGCUCCAUUUCAAGCCAUCAUAGGCAUCACCUCAAAGACAUUCUACUCACUGCAAAGCCAGGGAGCCAUUUCUUUCUCUCAAGUUGGCAUGCGUUCCUUUUUCUUAGUUAAAUCAUAAAUUAACAGGCCCAACUUAAUUAUCAUGGAAUAAGCCACAGCAAUUUUACCCACCUAAGGUCACUCUGUGCAUUCAUUUCAGGACAAUGACAAGCAUUGGGAUAGACAAGGCAGUAGAUUCUCAAUCAAUUGGUGCUGUCUAGUAGGUGAAGAGUGACACCGAAGCAGGAUUUGCAAGUCAACUGGCUCAUCUUCAUAUUAUUUGAGGUGUUGUCGGACUGCCUGCAAUGCCAUUCGUCAACUCUUUUCUCGUUUCCCUACCUCCUUGGUUAUCUAACCUUAAGAAGUAAUAUUCAAAUUUCAUCUCAGUUGUAGAUGUCUAUGAGAUUGGCAUUGCUAUUGUAAUUCACAUUAGAUUGUUGUCAAAUCGAUUAAUUGAACGUGGAUGUCAAUGCAUUGGAAUCCAUUCUUCCAUUGUAUGUGUGAUCGCCUAUGAUGUGUUAUUAAGCUCCUACUAUUCUGGUGUAAGCAAAUAAUAUAAAUGUAUCAGCAAACCCAUUUUAGUUUUGCCCUCAA
Sequence
(XR_003243510.1):
CCUCCUUAUCUCUUCCACCCAGCCAGGCCAGGUUCACAGUCCACAGUCAACACUACACUCCACAGCCAGGCAAAGCACCGACGCACGCGCCCCUUCUCUUCCCUCUCCGUGGCGGCAUGGCGGCGUGCCCCCUCCUCCCGCUGCUCCAGCUCUAGCCCUCCCUCCACAACAUCCUGGACAUGGAUCCUCUACCUUUGGCUCGCCGGAGCAAUGGGGCCACCAGACUGCCAGCGAUGAGUCCGGGGGCAUCCAGAUCCAGCGCCACCUCACCCAUGGCAGCUGCUCCGGUGCGACGAUGGCCAGGGGCCGCGCUGCCCUCCUCAUCCCUCCACUGGUUAGUGAAGAAGUUGGGUGAAGAAGGACCCGGGCAAGACUUACAUGCUAGCUGCCUCUCCAUGGCGGAGAACUUGGAGCUUCUAACUGGUAGCUCGGAUUUGAUUUCUAGUGUAGCUAGUGACUAAGACAUACUCCAUCCGUUUCACGAUAACCAAGUGGAGAUAAAAUUCUUGUUUUAUCUAUAUGAUGCAAUUCCUUUCCUUGAGGAUUGCUUCCAUGAGCCACCCAGUACAACACAACUAAAAUCAUAUGGAAAGAUUGGAGCCAUGUUCCAAGAAGUCAUUCCAAAAUUGCAAUGUCUGUUCCAGUACUGAACCAAUCCAGCUCGGCUCCAUUUCAAGCCAUCAUAGGCAUCACCUCAAAGACAUUCUACUCACUGCAAAGCCAGGGAGCCAUUUCUUUCUCUCAAGUUGGCAUGCGUUCCUUUUUCUUAGUUAAAUCAUAAAUUAACAGGCCCAACUUAAUUAUCAUGGAAUAAGCCACAGCAAUUUUACCCACCUAAGGUCACUCUGUGCAUUCAUUUCAGGACAAUGACAAGCAUUGGGAUAGACAAGGCAGUAGAUUCUCAAUCAAUUGGUGCUGUCUAGUAGGUGAAGAGUGACACCGAAGCAGUCACUUGGGUGUAGGGAUGGAUGCCGAGCCAGCUCGGCUCGGCUCGGCUCGACUUGCUCUAGCUCGUUUAGAUAACGAGCUGGCUCGGCUCGGCUCAUUAUCUAAACGAGCAGAAAACGCAGCUCGGCUCGGCUCGGUCAGUAGCUCGAGCUAGCUCGUUUCGGCUCGCGAGCUGGAGAGGGCAAGAUAUCAGACAUCAAGAUUAGAAGAGCUAGGACAACGGAACGUGAGCCGACGAGCGGCCUGCAGCGGCGAGGACGAGCACGACGGUCGACGGCAAGGCAGACAGGCAGACCGCAGCGGCGAGUUCGAGUGCGAUGACCGACGACACAAAAAUCUGCGGUGCCAAGGUGACAGCGCACGCGACGGCCAAGCUGGGGCAACGCCGCGACGACCGACGGUGCUGCAGCCCUCAGCGCAGAUUGGCAGAUGGUCGCGACAGGGAGGUGGCGAUGGCGCAAGCACUAGAGACCGGGAAGGAAGGGGCAGCGCGGCGUGGCUGCGAGGUGCAUGCUGGGCGAUGAGCGGCAGACUGGCGGCGGAUAGGCAGAGUGAAAAGGAGAGAUCGAGACUCUCGAGAGGCAGGAUUUGCAAGUCAACUGGCUCAUCUUCAUAUUAUUUGAGGUGUUGUCGGACUGCCUGCAAUGCCAUUCGUCAACUCUUUUCUCGUUUCCCUACCUCCUUGGUUAUCUAACCUUAAGAAGUAAUAUUCAAAUUUCAUCUCAGUUGUAGAUGUCUAUGAGAUUGGCAUUGCUAUUGUAAUUCACAUUAGAUUGUUGUCAAAUCGAUUAAUUGAACGUGGAUGUCAAUGCAUUGGAAUCCAUUCUUCCAUUGUAUGUGUGAUCGCCUAUGAUGUGUUAUUAAGCUCCUACUAUUCUGGUGUAAGCAAAUAAUAUAAAUGUAUCAGCAAACCCAUUUUAGUUUUGCCCUCAA
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
1
NEP:
0.2%
LE_num:
LEP:
19.92%
ME_num:
MEP:
0.61%
HE_num:
HEP:
79.27%
Type:
HCR (High-Capacity ncRNA)
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
pistil
Tau :
0.80
Avg Expression:
211.43
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
Num. | Condition | log2(FoldChange) | Padj |
---|---|---|---|
1 | Amaroo // embryo // dry seed 0 h--/--Amaroo // coleoptile // 3dN | 1.01947386109238 | 1.37952318502006e-09 |
2 | WD20342 // leaf // none (control)--/--WD20342 // leaf // 0.5% Na2CO3 solution for 36h | 1.35533535703886 | 0.0270486922166458 |
3 | Nipponbare // shoot // "Control,22C for 10 min, then 30C for 10 min"--/--Nipponbare // shoot // "Heat,42C for 10 min, then 30C for 10 min" | -1.23136735395766 | 2.57576860702669e-18 |
4 | Nipponbare // leaf // "wild_type,control,2"--/--Nipponbare // leaf // "wild_type,drought,2" | 2.56425479262526 | 4.34105794669152e-20 |
5 | Nipponbare // leaf // control--/--Nipponbare // leaf // drought | 2.56455519482693 | 3.83677435943914e-20 |
6 | Nipponbare // leaf // "wild_type,control,1"--/--Nipponbare // leaf // "wild_type,drought,1" | 2.56409165674602 | 4.53376572974877e-20 |
7 | Nipponbare // panicle // AM--/--Nipponbare // panicle // PM | 2.84422570935547 | 1.37323933618745e-13 |