Chr:
Chr8
Start:
10600184
End:
10601589
Strand:
+
Ref_name:
LOC112939870
Sequence
(XR_003243783.1):
AUUUGUUCAGAAAAACCGAGAAAUGCCAUUGACAAAUACAAAAAUCUAAUAAAUAUCAUCAACGAGUGCGAGUUCUAUAAAAUACCAUUUUACAAGCACUACUAUAAAAUAUCAAAUAGGUGUCGCCACUAUAGGUGCCAGUAGUACUAAAACCGGCACCUAUAGACCUUUUCCUACCUCCACUAGUUGAAAUUACAAAAAAACCGGCACCUUUAAGUAAUUAUUGGUGUCGGUUCUAAAUAAAAACCGGCACAUAUUAUAUUCUGUAUCGGUUUUUUUAAAAAAACCGGCACCUUUAACAUAUUAUAGGUGCCGUUUUUUUUAAAAAAACCGACACCUAUCUAAAUCGAGCCGAGCCGGAGCCGAGCCAGCGGGCCCCACCACGACCGCACGACGAGCAAUGCGAUCGAGGAGAUAAGCCAGCGGAGGCGGAGGCGACAGCGGCGACCGCGCCCUCCCCUUCGCCAGAUCCGGGGGCGGCAGGAGGGGAGGCGCCAGCGGCGGGCGGGGUCGGCGCCAGCGGGGCCGGCGGUGUCGGCAGCGGGUGGCGGGAUGGCCGGAUCCGGCGGCGGGCGGGGUGGCUCGAGGAAGGGAGGCGGCGGAGGACCCGCCAGCGGGGAAGAGCCCUCCCCUCCGCCAGAUCUGGCGGGAGGGGAGGCGGCGGCAGGGGCGGUGAUGGGGAGGCAGCGACAGUGCGACAACGACUCAUGCGACGAUGACUUCAUCCGGCGGCAUCUUCUACCCUCCCCUCCUGCUUCUUCUCCGGUGAUGAAUGUUGUGAUUUUUUUAUUGCAUAAAUUUGUGUUGUGGGAUGAUUGUUGUGGGAUGAAUCCAUCUUUGAAUGCUGUGGGAUGAAUCAGUCUUUGAAUGUUGUGAUUUGUUCUGUUCUUGCGGAUGCGGGUUCUUGCGGAUGUGGGAGGUCUUGCGAUGCGAUGUGGGAGGAGGGACUGCUCGCCUGCUUGGCUCGAUGCGUCGGCUCGAUCGAGCUGUCACAUCGAGCCGGCUUUUUUUUGAUUCGUCGAACCUAAAAGGUGCCGGUUCUAAGCAACCGGCACCUUUUUAUUUUCAAAUCAGUGCCGCCUUCCUUGUGCCGGUUGGGAAAACCGGCACCGAAGAGGGUUCCCCAACCGGCACUGAAAUCAUUUUCUGUAGUAGUGAAGCGAUUUUGUCCCAUAAAUAUUAUUGUCGUUAAGGUUCAUCCAUCCCGCGCCAUUAAAUGCACUGUUCAUCCUAUAGCAUUCAACGAGGGAUGCUAACGGAACUCUAACGGUGAAGGUAUUUUUGGGACAAAGUCGUAUGCACAAUGGUAUUUCA
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
1
NEP:
0.2%
LE_num:
LEP:
56.3%
ME_num:
MEP:
41.06%
HE_num:
HEP:
2.44%
Type:
HCR (High-Capacity ncRNA)
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
anther
Tau :
0.84
Avg Expression:
4.38
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
| Num. | Condition | log2(FoldChange) | Padj |
|---|---|---|---|
| 1 | Caidao // leaf // none (control)--/--Caidao // leaf // 0.5% Na2CO3 solution for 36h | -6.16759070556018 | 0.000412952845646572 |
| 2 | Nipponbare // shoot // No_DIS;Fr13_inoculated--/--Nipponbare // shoot // Drought_during_3_days;Fr13_inoculated | -2.25973128749249 | 0.000969930939633201 |
| 3 | Nipponbare // shoot // Drought_during_3_days;_mock_inoculated--/--Nipponbare // shoot // Drought_during_3_days;Fr13_inoculated | -2.72172145546509 | 1.64942361870294e-12 |
| 4 | Nipponbare // shoot // "Control,22C for 10 min, then 30C for 1h50 min"--/--Nipponbare // shoot // "Heat,42C for 10 min, then 30C for 1h50 min" | 1.9662983734465 | 0.0261521329087186 |
| 5 | Nipponbare // shoot // "Control, 22C for 10 min, then 30C for 50 min"--/--Nipponbare // shoot // "Heat, 42C for 10 min, then 30C for 50 min" | 2.54575798577291 | 0.00416534182461448 |
| 6 | Nipponbare // leaf // Non-inoculated--/--Nipponbare // leaf // Inoculated with Pyricularia oryzae | 2.2447010252353 | 4.85599228939405e-16 |