Chr:
Chr8
Start:
17684643
End:
17687984
Strand:
-
Ref_name:
LOC112939860
Sequence
(XR_003243750.1):
CCGCGCCCCUCUCUCUCGUCCGGCCUAGAGAGAAAGAAAAGUCUCCUUUGCAACCCUCUACCUCCCUUCUCUCUGACGCUUCGGGUCCACUCGGCACAGUGCCGUCUUCCUCCUCCAGCCAGCCUCACUCCCCGUGCCCGUGCGUUGCAACACAGUCUCCUCCACCAAAUCCGCCCGCGCCGUUGCUCCUCAUCCAAAAUUGAUCACGGAAACGGAAUCCUCUAGGCUUCCCCGAAGAAACCCCAAUUUUCGCGAAGUAAAUCGCGCGAAUUUCUGCCCCGUUCUUAUCCCGACGAACUAAUUUUCCUUGACCGAAUCCCUCAAAUACGACUCGAUCUCUACCUCCUCCGCCUAUAUAAAGAUGCCCCAGAUCUCCUCUUUGGUACCCUCCUUUCCCCCGAGCCGCCGUGCCCUAGCCACCUCUCCCCGCGAGAUUGCACUCUCUCCGCCGCCAACUCCGGCCACGUUGCGUCGCGCCGCCCCUCUGGUCGACGCCGCCUUGCGCUGUCGCCUCCUUCGGCUGCACAAGGACAAGUGCUACCUCGGCCGCCGGCUCCCUUGCGCCGAAGACCGCCGGAAGCCGCUUACCCAAACGAACCCGAGCGCCGCUGCCUCCCGUCGACCUCCAGCCGUCACCCACCGUUGUUCCCGCCAUUCCGAACCUUUGCCGUCGCCAUCCCCGUCAUCGCAGCGCCGAGGAGAAGCCCGUCUACCCCUUCGAUGCCGCGGCCCGUCGCCGGAAAGCCGCCGCCUGCGCCGACCCGAGCUCGCCGCCCUUUGGAGCUCGCCGCCGGUGUCUCCCUUCGCCAUGUGUCAUCGUGUAAGUAGUGGUAAGGAUCGCCUCGGUCCCUUCUUCCUCCCCGUGCCCUCUGUUUCCGCCGGAGCACCACCGUUCGCCGGCGACCCUCGGUUCCUAAGCCGGCCCGCGUCGAUCCCGCAUGGCUUCCACGUCGUUGCCAAAUUACCACCACCUCAGCGCCACGUCAUCAUUCUGUCCACGUGGGAGCCGAUCUAAACCUUGGAUCAGCUUCAAUCUAAUCGGUUGGAUCUCAAUCAACUGGCGGUCAAGAUCGAUCUGAGCCAUCCAUCCCGUGGACCCGUGGACCAUUUUGUGGACUUGGUUCAUGGUAGCGGCUCCAUGACUAGUAGGUCCCACCUGUCAUCAACCUUAUCUCUCUUCUCUCCUAGUGCUGACGUCAUAUUCCUCUACUUUUGCGUACAAACAUAAUUAAAUAUGAUGCAGUAAAUCAUUUAGUUCGUUUUUAUAGGGUUUUAUUAUUAAAACUUUAGUAAUUCAUAAUUAAUUCAUAUGAACUCGGAAUGAGCUCGUUCAAGUUUCAAUUCAUAUGAACUCGGAAUGAGCUUGUUCAAGUUUCAUAAUUCAUAUAUCUCUACUCAUUUAUGAACUUCAGUUGUACUGUUUAUUUGGUUUCUAUUAGUGUUUUCUCUCGUUCUGUUUAUGAAGGAUCGUUCGUUCACUGGAGAAGUUCCUGAAGACGAAGAUGCUUAUUUGUAAGGCAAGUCACACAGAUCCAAAAUACCCUUUGAGAAUGCUGAACACAUGUUUAAAAUUCUCUAUUUCAAUCAAAUAUGUAUUUAUUUUCGAAUGUCAUUGGGUGGUGAGCCUUUUUUCUCAUAUUAUGGCCGAAGAUGAUUUUAUUAUCUUAUGGGUUAUAAUUUGACUAGGUUGGACCUUAUAUAUUGGUUCAGCUAUAUAUUAGAUGUAAUUGUUUAUCCAUGCUUAGAAACAUUAGCACACUAUUGGGAUAAUGAAUGCUUCACAAUUACUUAAUGAUGGCUAUUUAAUGGUAGCUCGUGAUGGUAAAUCAUGAUUGGUUAAUUAAAUAAUCGCCAGCUAAAACCUGAUAAUGGUGAGUUGUGAGCAUAGUGUUUUGGUGGCCAUGCUGAUGACAAUUAACGACCAGUUCGCAAACUACUGUUGUGAUAAUGAUAAUGGUUCUGAAGCAUAUUAUUCCUCCCUCUCCCUCUUUCGAUCUUCUAAUUGGAAGAACAAAAGAGUGGGUUGGAAUUCGGUUCUUUCGAGCCUUGCUUGGGCUCGUUCUAUCUUUGAAUAUAGCAAUUUCCAUUCCACCUCAAUCCACAUUCCUUUCAUGCUUUGAGCUUCCAGGAAAUCACGGUUGUGGGAAACCACAUCACGGAAGAAAACUUAUCAUUCCUCAUGAUCCCACAGAUCCUGAUAAGCUGCCUGGAGAAUAGAGAAAUCAUCCAGGAGAAUAGAGAAAUCAUCCAUUGCUCGGAUAGAGUCAAGAUAGGAACAAAGUGCCCCCUCCUAAAGGAAGAGCCUCAGUCGCCCAGGUAUGUCCUCGAGAGGGUUGUUGUCAUUCAACUACUGUUGAUCCUACUCGUAAAGGCUCAGACAUAAGCCAACGUGAGCAACGUCUGGAUGCGUUGUAUAGCAAUAUGGUUCAUUGUGGAGUGCCAGACUGAGAAGUGGCAGAGAGUCCACAGGGUUGCUGGGGAGUCUAUACCCUUUAAAAAGGGUGACUAUGAUCCGGGGAUAGUGCAUUGCUUUUAAUUGUGUCAUGCGAGGUGUCUUGUCACAAUCCUGUUUCGAGGUAUCGUGGUGCUACUGAUGGCAUGGCUACAUGUUAUGGGCUAUGUCUUGUGGGUAAAUUUAUACACCUCCGGUUAUGGGGCGAGCCUAACAAUGUUUUUUCGUGAUUAGUACCAGAAUAUUCAUUAAAAAUAAUAAUGUGAUAAAUGAUGAUGCUUUGGUUUAGCUCCUGGUUUGGAGAUUGGGUCUGUUCAACCGAGCAUGGUUGUUCAGAUAUGGUGGGGCAUAUGCAACAGGUAUGUUGUAUAUCAUUGGAUUAAUACCUUUUAAUUAAUUACUCUACUGUUUUACAAAUUCUCAACUCUUUGCCAAAUGCUUCUUUUGCAAAUGAACCCUAUAUUAUGCCAUCCUAUAUUAUCGCUGUGCACUUGCAUACUUGUUGUGUGCUUUGUGAAGUAUUUCAUAUACUCGCCUUGCAAUAAUCAUCAAACCUCACUUGGAGACAAAGGAUUCAGAAGGAGAAAACCUUUGUCUUAAAUCCUAUUUGAGUUGAAGCUUCGCUAGAUUUUAUUUUUCCGCUGCAAUUUUCUUCGUGGUGAGGACUAAGUUAUUCUUCUGUAAGUAUUUUAUCGCUUUACUUAUUAUGAUAUUCUGUAUAUUAAAUUGUCCUUUCAUGCACCUCGGCUAAUUCCUAGACGAGGAUAUUAAUGCAUAAAUUAGUUCGAAAA
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
1
NEP:
0.2%
LE_num:
LEP:
93.9%
ME_num:
MEP:
5.89%
HE_num:
HEP:
0.0%
Type:
MCR ()
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
anther
Tau :
0.90
Avg Expression:
1.77
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
| Num. | Condition | log2(FoldChange) | Padj |
|---|---|---|---|
| 1 | Nipponbare // shoot // "Control,22C for 10 min, then 30C for 1h50 min"--/--Nipponbare // shoot // "Heat,42C for 10 min, then 30C for 1h50 min" | 2.83593464238874 | 0.0496740550829573 |
| 2 | BR-IRGA_409 // spikelet // control condition (29C) for 7 hrs--/--BR-IRGA_409 // spikelet // high temperature treatment (38C) for 7 hrs | 2.89998631892094 | 0.0334185297322022 |
| 3 | Nipponbare // leaf // Watered;Long_Day--/--Nipponbare // leaf // Drought;Long_Day | 1.88400547973196 | 0.0307133644756636 |
| 4 | Nipponbare // leaf // Non-inoculated--/--Nipponbare // leaf // Inoculated with Pyricularia oryzae | 1.83495237094664 | 0.00965046074138063 |