Chr:
Chr7
Start:
3896154
End:
3897191
Strand:
+
Ref_name:
LOC112939722
Sequence
(XR_003243579.1):
UAGGGAGAUAUAUUAAUCAUCUAAAGACUAAAAACAAUUGAUGUGAUAUGACUUAAUUAGAGGAAAAAAAGAGAAAGAUAAUUUGGACCAUAGAUUAAUCAUUUAAGCACUGACUAAGUGAGAAUGACCUAUAUACUUUAUAUCAUAAAACAUAAUAAAGAUAUACAUUGAAACAUUAUGUGAAUUAUGUUGGAUGAUAAUUUAACAUGUUUGUAUUUUAAAAGCUCUUAAAUUAUAAAAACUAUAAAUAUAUAGCAUGUUUGUAUGAUGUUUAAAUGUGAUGAGUGUUAGUGGAUGAUGAUGUGACAUCUUGUUAAUUAGUGGAUGAUGAUGUGACAUCUUGUUAGUGGAUGAUGAUGUGGCAUCUUUGCAUGUCAAGCUUAAGAAGUUAGUGGGAGAUAACUUUAUAGGAAGAUAGGAUUGGUGCAAUAAGAGAAGAGGACUUUUUUCGGUCUUCUCGUCUCUUUGCGUCUCUCAUUUCCUCUCUCUCCAGUGCUCUGCCGCCGCCGGCAUGCCGAGCGGCUACGAUGGGGCCGUAUAUGUCAUGGAUAUUACCUGAAAGAAGCAUCUCUGUGCUUGGCUGCUCGCCAACUCGCCGUAGCCGUCGCAUAUACAAAUUACAGGCUGAUGGAGCAGCAGCAUGCGCAAGAAGUAGAGACAUGGGUUAUGUUACCGGAAUAAGUUCACUCUGACUCCCUUAACUAUUGACCAAAUCUGUUUCGUAUCCCUAAACCACACUAUCGGAUAACUCGACCCCUUAACUAUUAAAAUCAGUGCAAUUUGACUCUUUCGAUGGUUUCGCUGACA
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
1
NEP:
0.2%
LE_num:
LEP:
83.54%
ME_num:
MEP:
16.26%
HE_num:
HEP:
0.0%
Type:
MCR ()
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
shoot
Tau :
0.95
Avg Expression:
1.07
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
Num. | Condition | log2(FoldChange) | Padj |
---|---|---|---|
1 | Nipponbare // leaf // 48_hrs_after_mock_inoculation--/--Nipponbare // leaf // 48_hrs_after_inoculation_with_L8 | -2.45191452483603 | 0.0415509644800512 |
2 | Nipponbare // leaf // 48_hrs_after_mock_inoculation--/--Nipponbare // leaf // 48_hrs_after_inoculation_with_B8_12 | -1.76609067717244 | 0.0252391989210173 |