Chr:
Chr7
Start:
8907456
End:
8909799
Strand:
+
Ref_name:
LOC112939587
Sequence
(XR_003243339.1):
CACCACUCCAGAGCAAAGCUACCAGCGCACUCUCAUCCUCCACUAUACCCCUCCUUGUAGUAAUCUCUCUAGUCUUCCUUGCAAACUAUAUUGAAGCAAGGUGUGUAUAAGUGUAAGACUCUUUACACUGUGGAACUAUAUUACAACAAAGGAACUAUAUUGCACUCCAGAGCAAACAUACCAGCGCGCGCUCUCAUUCUAUAUUGGAAUUUGUAAUAUUCUUUUAUCUAAUAAGACUCCAAAUUGGGUGUUUCAAGAUUAUCGAGGUAAGUCUAAUAUGAUCUUUGCAGGUUGGCGAAUCCAACACAGCCGGCGCUUUCAAACAGAAGUUUUAAAAUCCUACUCGGUACUCACCAUACGCCUCACCUAUCUGUCUUUUUAGAAGCAACUUAAAUUAGAUAACCCUAGUCAUGAACGAUCUAGGUAAGAGUUUAUCAUCUCCCCAGGCCCUUCCACCCGAAGGGAACACUUCUCUAUGGAUACAGAUUCUCCAGACGCCUAUGCAAGAUGCAGGCUAGAAAUGAGAACAAGCGAAGAGGUUUCUCCUAUAGGGUCCCUAGCAUAAACACUUGACUAGAACGGACAGACAUGGUUACUUAAGAAAAGUUACUUCAUACUGAACAGAUAAACUUACAUACAAGCUUUCUUCUUACCUUACACUUAUAUUACACACCUUGCUUCAAUAUACUUUGCAAGGAAGACUAGAGAGAUUACUACAAGGAGGGGUAUAGUGGAGGAUGAGAGUGCGCUGGUGUUGACGUGAAAACACGAGGCUUGAGAGAUCUGCUUAACUCUAGUGCAGGUCCAAAACUUACCUUUGGGUGUGUGUGCGUGCCAGUUGAUUUGAUCCUGCAAUCAACAAGAAACAAAUACAAAGAAACCGCGGUUAAAUCCAUAAACGAUAGCCGAUCGGCUAAUUGCUGAUGACAUAUCAUUUAUCUUCGAGCCGAUGUUAUAUAUGCAUCAAUCGGCAGUCAUUAAUAAGUAAGAAAGAACUAAAUCUACUUGAUCGGCUGUAGAUAUUAACAAUAUAUAAUCCUUAUAUCGAUAUAUACUAAAAUCAAGUGAU
Sequence
(XR_003243340.1):
CACCACUCCAGAGCAAAGCUACCAGCGCACUCUCAUCCUCCACUAUACCCCUCCUUGUAGUAAUCUCUCUAGUCUUCCUUGCAAACUAUAUUGAAGCAAGGUGUGUAUAAGUGUAAGACUCUUUACACUGUGGAACUAUAUUACAACAAAGGAACUAUAUUGCACUCCAGAGCAAACAUACCAGCGCGCGCUCUCAUUCUAUAUUGGAAUUUGUAAUAUUCUUUUAUCUAAUAAGGUUGGCGAAUCCAACACAGCCGGCGCUUUCAAACAGAAGUUUUAAAAUCCUACUCGGUACUCACCAUACGCCUCACCUAUCUGUCUUUUUAGAAGCAACUUAAAUUAGAUAACCCUAGUCAUGAACGAUCUAGGUAAGAGUUUAUCAUCUCCCCAGGCCCUUCCACCCGAAGGGAACACUUCUCUAUGGAUACAGAUUCUCCAGACGCCUAUGCAAGAUGCAGGCUAGAAAUGAGAACAAGCGAAGAGGUUUCUCCUAUAGGGUCCCUAGCAUAAACACUUGACUAGAACGGACAGACAUGGUUACUUAAGAAAAGUUACUUCAUACUGAACAGAUAAACUUACAUACAAGCUUUCUUCUUACCUUACACUUAUAUUACACACCUUGCUUCAAUAUACUUUGCAAGGAAGACUAGAGAGAUUACUACAAGGAGGGGUAUAGUGGAGGAUGAGAGUGCGCUGGUGUUGACGUGAAAACACGAGGCUUGAGAGAUCUGCUUAACUCUAGUGCAGGUCCAAAACUUACCUUUGGGUGUGUGUGCGUGCCAGUUGAUUUGAUCCUGCAAUCAACAAGAAACAAAUACAAAGAAACCGCGGUUAAAUCCAUAAACGAUAGCCGAUCGGCUAAUUGCUGAUGACAUAUCAUUUAUCUUCGAGCCGAUGUUAUAUAUGCAUCAAUCGGCAGUCAUUAAUAAGUAAGAAAGAACUAAAUCUACUUGAUCGGCUGUAGAUAUUAACAAUAUAUAAUCCUUAUAUCGAUAUAUACUAAAAUCAAGUGAU
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
1
NEP:
0.2%
LE_num:
LEP:
95.73%
ME_num:
MEP:
4.07%
HE_num:
HEP:
0.0%
Type:
MCR ()
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
crown
Tau :
0.94
Avg Expression:
0.71
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
Num. | Condition | log2(FoldChange) | Padj |
---|---|---|---|
1 | Amaroo // embryo // dry seed 0 h--/--Amaroo // coleoptile // 2dA | 3.6817137885957 | 0.0123795306755992 |