Chr:
Chr6
Start:
12730901
End:
12733338
Strand:
-
Ref_name:
LOC112939382
Sequence
(XR_003243052.1):
CUUCAUCUUCCAAGCUAGAUGUUGAAGCUGUACAUAAACAUUAUCAACAACAAAAGCAACGGUGAUUUUGUUAGAUAACAUGAUUGCAAUAUACCUUGAUCCCUCAUAGAGAUGAUUGCAAUAUCCUUCUGUACAAAUCGUGGUGGAGCCAUUCAAGUGAAUGAUCCAAUUAUCCAGUCAAGUAGUAUUAAGAAUCUAUCUCUAUUCAUUUUCAAGGAGACAAAAGAUGAGAUUUGUUGACUUUGAUGGGUUGGAGUUAUGGAAACGAGAUGGUUGCCAAAAAAUAUUCAGUUUCCGAUGUUCCGGAGGAGAGCGUUUUCGUUGAGGAAGGUUC
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
1
NEP:
0.2%
LE_num:
LEP:
97.76%
ME_num:
MEP:
2.03%
HE_num:
HEP:
0.0%
Type:
MCR ()
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
panicle
Tau :
0.88
Avg Expression:
0.06
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
Num. | Condition | log2(FoldChange) | Padj |
---|---|---|---|
1 | Nipponbare // root // "mock,7_days"--/--Nipponbare // root // "auxin(50CM_2,4_D),7_days" | -4.96625150710129 | 0.036003717620007 |
2 | Nipponbare // panicle // AM--/--Nipponbare // panicle // PM | -3.22500966287537 | 1.34693042072922e-08 |