Chr:
Chr5
Start:
23374044
End:
23377773
Strand:
+
Ref_name:
LOC112938981
Sequence
(XR_003242260.1):
ACACAACGGCGUAAUCCCUUGAUCCCUUCCCUCCCCCAACAGAAGGCAUCGUCUCUCUCCAUGCUGCUGAUCUACUAUUACUACAACAAAAUAAAAAUUCCCCACCUUGACCUAGAUGAACUCCGCCAGAUUCCGCCGCUUUACGGGUGAGCUCGAGCACCGCUUGCCCGAGCAGUCGAUUGUCUCGAGCUCGCCACCACUGAUCAAGCGCCUUGCCGCUGAGUUGGAGCUGAUGCAUGGUUCAGCUCGUGCAAAUUAAUCAAUGUCCAGCUGCAUCAAAGUGCAUGAGCUUGGAUCGAGAAGGUCCAUGAUGUGAUCGAUGCUAACAUCGUCAAGUAUUACGCCAACCUGUGGAUCCAAUCCAGCCCGUGUGACUUGAUUUUGUUCAGCCAUCAGAGGGAUCUGUGGACUCAGCAGGAUUUGAUGAUGAUGAUGAUGAUGAUGAUGGGGGCAGAAGUAUCAUCCAAGAAUGCGAACGUACCGCAUGUUCCUGUAUUCUGCAAUUGUGAUGGCAUUGGUUCAGGAAUCGGGAGUUCAUCAUGGUGCCAAGAUUUGGGAGAGUUCUUGUUAGUGUGGAGACGCAAUCUGUGUAGAUGAAAAUAAAACAACUGUGUAUUUGUACUUAUGUACCGCUCUAAUCCUUUUUCCCGCCACUAAUUUUAUUUGCUUGGCGUCAUAUUUUUGUUAGCGCUUAAA
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
1
NEP:
0.2%
LE_num:
LEP:
49.19%
ME_num:
MEP:
12.2%
HE_num:
HEP:
38.41%
Type:
HCR (High-Capacity ncRNA)
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
carpel
Tau :
0.81
Avg Expression:
32.00
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
| Num. | Condition | log2(FoldChange) | Padj |
|---|---|---|---|
| 1 | Caidao // leaf // none (control)--/--Caidao // leaf // 0.5% Na2CO3 solution for 36h | 8.647572457564 | 2.70572398949385e-12 |
| 2 | WD20342 // leaf // none (control)--/--WD20342 // leaf // 0.5% Na2CO3 solution for 36h | 9.89362618688425 | 9.57432820114475e-13 |
| 3 | 9311 // leaf // control--/--9311 // leaf // salt | 2.03894853001359 | 3.14254548428587e-44 |
| 4 | 9L136 // leaf // control--/--9L136 // leaf // salt | 2.14609007925519 | 3.36812528546841e-05 |