Chr:
Chr3
Start:
35060058
End:
35062789
Strand:
+
Ref_name:
LOC112938191
Sequence
(XR_003241228.1):
GCCGUCGACGAGGCCACGGAGGACGACCGACGACGAGGAGGAGCUCGCCUUGGCCAGCUGCCGGCCUCUCCCCUUCUUCCUCCUCUCGCCGCCGGCUUGUCAGUCUUCAGAAUAACUUUUGCAUUGAAGCGACGACAUCUGAUGACGACGUCCCCUCUCCUAGAUCAAGCUCGGUGGCAGCACGGCGACGGGGCUCCUUAAGCAGAUGCGGUGCAGAUCCAGCCUGCCGCUGCCCCCUCCUCGUCGCUGGAUGGGGAUGAUAAUAAGCUCGAUGGCUGCGCGUGGGGAGGGGGGAGGAGGUGGGCAGCAGUGACUAGCUCCGAUGACGGCGAGGCCCUCUCCUCCCACGCGACCCUCUCCGCAGCCGUCCCUCCACUAUCGACGGACGAGAUCGGCACACGCGAGCAUGAAUCCCCAGGGUUUACCGCCAUGUGCGUGGUGACAAUGGCGCAUGGGACUGCUUGGCGACUGAACCAGCUGCCGCAGUGACGGACAGCGUCGUUGUCAGGCGUCCUGUUGCCGCGAGCUGAUGAAUAUCUCCUCCAAGCUUCAGCGGCGUCGGGCUGCUCUUCUGUAAUGAACUGCUAAUAGAGGAGGGUGCGGUUGUGUAUAUGUUUGUGAAGGGAGAUCGACUGAUCGACAUAGGGAGAAUCAAGAGCAUGACAAGCCGUCAGGUGACAUCCGGCAAGCAUAGGAACGAUCUACUGAAGAAGGCCUACGAGCUCGCCUUACUCUGCGAUGCUGAGAUCGGACUGAUCAUCUUCUCCAGUCGAGGACGCCUGUAUGAGUUCUCCAAUAUAAUUAUGUAAACUGGUAUGUACAUGCAUCAUGCAUGCAUCCACCACUUCAUUUAAUUUGCUAACAGCUUGGAAAUUAAUAAAUGGCACCAUAUUUGACUCAAUUGAUUAA
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
1
NEP:
0.2%
LE_num:
LEP:
78.25%
ME_num:
MEP:
21.54%
HE_num:
HEP:
0.0%
Type:
MCR ()
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
shoot
Tau :
0.84
Avg Expression:
1.42
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
| Num. | Condition | log2(FoldChange) | Padj |
|---|---|---|---|
| 1 | 9311 // leaf // control--/--9311 // leaf // salt | 4.37427890942885 | 0.0200674590643286 |
| 2 | 9L136 // leaf // control--/--9L136 // leaf // salt | 4.06488175963722 | 0.00348447372592884 |
| 3 | Nipponbare // leaf // Watered;Short_Day--/--Nipponbare // leaf // Drought;Short_Day | 4.39659504177889 | 0.00430280061375395 |