Chr:
Chr2
Start:
18569758
End:
18573294
Strand:
-
Ref_name:
LOC112938005
Sequence
(XR_003241048.1):
AUCAAAAUGCACUUCAUUCAUUCUUGUCCACCCGUUGCCCAGCCCAGACUGCUUAGGCCCACAUGUUGAAGGCCCACCUAUGCCGAUCUCCUGGAACUCCGGCAUCCUCGCCAGUAGCCGCCGCUCCCACCGUCCAACGAAAGGAAGCGGGCGGCCGGCGCUCGGCGGCGCUCGGCAGGCAUGGCGAUCGGAUGGGAUGGGAUCGGAUCGGCGCAGGGCCAAGGCCCGAGGGUCGCAUCCUGCGACUCCUGUGAGUUCGUGGGCUAUGCUCGCUCGCUCUUCUCCUGAGAGAGAAAGAAUAGCAUUGCCUAAACGCACCAAACAGGCGAAGAACAAUAAGCUGAUGGAAUGUUGACCUACGCGUUUGCUACUGCUGCCUCUCACUGGCUUAGUGCUAUGCUUAGGUAUGGUUUGUAAAUUCGAUCUAUUAUUUGCUUUCAGCAUGAUGUGUUAGACUCACAUUGUUUGACGGAAAUACUUGCACUUAAAAAGUAUAUUUAUCCAUACACUUGGCCACUUGAGACACA
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
1
NEP:
0.2%
LE_num:
LEP:
15.45%
ME_num:
MEP:
59.76%
HE_num:
HEP:
24.59%
Type:
HCR (High-Capacity ncRNA)
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
2nd_leaf
Tau :
0.79
Avg Expression:
11.62
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
| Num. | Condition | log2(FoldChange) | Padj |
|---|---|---|---|
| 1 | Nipponbare // leaf // Non-inoculated--/--Nipponbare // leaf // Inoculated with Pyricularia oryzae | -1.42326218753996 | 0.0141981392563576 |