Chr:
Chr2
Start:
31149020
End:
31153206
Strand:
+
Ref_name:
LOC112937899
Sequence
(XR_003240746.1):
GCCGCCACCCAAGUGGAUCCAGUAAACGGCGGACGACUCCACGGGAAAGCGCAACCGAGCCCAACUGCUAAGCCCCAGCCAUCGUCCGCUGGUGACUCACCGGCGGCGAAACCCCGGCGGCUGGACUCGCCAGUGAUUUGCCGUAUGCGCGUAUGUUCUCUCUCCCUCUCCUCUCCCGCGAUAGUGGAUUCGAGUUGCAAAUGUAGACAGCGGCCGGAGCCCGGGGAGAUCAUGGCGGUAACAGAAGACGGGAGAUUGCCAGAUCGCAACCGCAAGUAAGGAGAUCGCCAGAACGGAUUGUCCAGCAUCUCGAACUUUGUUGGCUUAUUGUUUGGUUAUGAUUUUCACGUUGGCUAGAAAAAAAAAACUCCGUAGUACUUUUGCAAUUGAGGAUCCCAACUCUCUAGUUAACAAGGUAAAAUAGUUUACGAACUAUAUUAUUCUUUCUUGAGUGCAUACUAUAGGGCUCCUGAUGCCCGUCCUGCUGACGCCUGUUCCUAAGAUCAUGACAUCAUGUUUAUCUCAUAUCAUCUCCAAGUGAAGCACAUCAAUCUUCCACUACCUAGGAGUAGUUAGUAACUUGUACAUGCUAUCUCAGGAUUUGAUGUUCCUUCUGGCUUCUGUUACCGGUCAGAUCGCUGAUCGGUUUUCUUGGAUCAAUCUGAUUGGAAUUAAUUAUGCUUAUCAAGGAAUUUGACCACCAGGUAAUCCAUCGCACCUCAAAUCAGAAUAAUGUGGUUGAGGUAAGGAUCAUAGCUUCCCCUUUCAAAAUUCGUAAAUGAUGAUAUGGCCAUAUGGCCUUCUUACUUUAGUGCUAUAGAACAAUAUUGCAGGUAAUACCGAGACAAUAAGCAAAUGGCCGUUAGGUGUUUAACAUCCAGUACUGAUAUAUUGGAGCAACUGUUAUUUGUUCUUAAAACUGCAAGAGGAACAUAGCUGAGGCUGAUUUGGACUCGGUUUUGCUGUUUUUGAUUAAAUGAAUCAGGGCUUGUUCAGUCAUAAGGGUUUUUUUUUUCGCCGGGCCGGCCAGAGUACAGUCAUAAGGAGAAGCAGGAAUCUUCAAUGGUUGAAAGCAUCUGUAGCAGAGACAUGAUCCAUCAUCGAUCAUUUGCUCGUGUCAAUUUCCAUGAGAUGUAAAGCAUUUCCAGUUGGACAGGUGAAAUCGGGCUUUCAAAGGAUAUAGGAUUCUAGAUGUUCAGAGAGGUCCUGGGCUAUGGGAGAUGCAUAACAAAGGUGUUUCCACUGCAUAGCAGUGAGGUAUGCGUGUUUCAUGUAUUGAUCCUUCUGCAUUUCAGACAACUUAUUCUUUAUUUUUUUUUUCAUUAGGAGAGGGAAAGCAACCUACCUUCACUUCUUUUUAGUAUGAGGAUUAGAUGCAAACUAAAACUUUGCAAUAAACUUAUCAGAAAAGUUCAGGUUCCAUGUUACGCAUAUUAUUACUGACUUGUCGGCAUUGUGAUAUAUACAGAUAUGAUAGAAGGUGAAUAAAGAUAAGCAUCGAUCCAUAUUGUCGGAAUAGUUAGGUUGCUACCUUGUGAUUAAAACACGACAUUUGCAGAAACAAUGAACCUUAGGCUUUGGGUUGCAUUCGUUUGGACCUUCCUGAGAUUGGUCCCUCGAUCGGAAGAUGCUAUCAAGCAGUAUUACUCGACGUACUAACUUCCAAACAGAGUUGGGACUUCAGUGGAUGGUCCACUUCUUUGUUGCAAUUUCUUUUUCCUCCAAAUCAUAUUUUAUCGCCGGCAUUUCCAUACUAAGCCAGCAAACGAUUGCUAGGAAAGUUGCAGUUGUCACUCAUGAAGUAAUGAUUGAUGGAAAAAAAAUCCACAUACAUCGCUCUCGAUCCUUUCUCCGGCAGUUGAUGCAUCUGAAAGUGUGAGCUUUCGCAGUGCAGAUUUUGCAAUCUUUUGCCGUCUGAUAUCACACUAUCAUCUACAUCAACGGAUCGACCUGAAGAUAAAGAAAUCAGGUAAGUAGGUAAUGCAUUACAUGUAAGCAUGUUUAUUGGUAUUUUUGCUGACUUCCCACUGUGUGCUUUCGGAUCCUCCCGACCAAAAGAGCACCUGAGUUGAUAAAUUACAAGGUGAUCUUGUACUCUACCUUAGAGAUAUGCACCUUUUAAGCAAACAUAUUUGUACUAGGAUAGCUCUAGGUGGCCACCAAGGUUAGUGUCCACUCGCUGCUUCGCACUUGUGAGAGACAGGAAGCAUAAUUUACGCUCUCUGAUUUCUCUCGCCAUUGCUAUCUGGUGCAGUAUUUGUAUGUGCCCCUGCCUCUUGCUCAAUACAUACGCAUCAUACGUUUGCAGCACCGGGCCUACUACCUGAGCUGUAUUAUCAUCAGCAUAUAUUCACCUCAGGCAUCAUAUAGAAUACUACAAAUUAGUGGAUGUGCCUCCGUUGUGGAGAACACUGAAACCCACCAUGGCACUAUGCUCCUCUUUCUGUCUCACUACAGGCUCCAACUGUUCCCGCAUGGGUUUGUCUUCUUGCAUCUGCACACGCACAGAAUAAUUCAUUCUUCGCAUCGCAACUUGCAAAAGCUGGUCGCUUGCCUGAUGCUGCGCCCUGACGCGUGCUUUCGCUAGCUAACCUUUACAUGUGUUCAGGCGUGGAUGGUUUGUUCAGGGCCUUGAGUUUCUUCAGAAAAUCUGCUAGUAGCGUCUUGUUCAGGCAGCUGGUUUGAUCAUCGAGCUUGAACGCUAGCCCUCAUUGAAUGCCUGAAGCCGAUUGAUGGGUUUUAUGGAUGGAUUAGUCGAACUGUCGAAGCUGCCUGGUUGUCCCAGCAAGCAUGAUCGCCGUGGUGCAGAUGUUGCUGUCCCUCUCUGCGAUCAUGUCAAUUAUAGCACGGAGCCUUCGUUUUAAGUUGCCAUGUCCAGACACCAUGCUUCCAUGGACGCGGAUCAGAAGUGUACAACCCAACGCGUUUCACCUGUGCCCCAAAAAAAAUGAGUUAAAACGAUGCAUUCAAGCUGUGGCGCCUGCUGCCCCCAUCCUGCUUGUUUUGCAUGGUCCCCCCUGUUCAGGUUCAGGGAGAGAGGUGAGGUGAGGUGAGGUCCCCCUUGCUUGGGCCGUGCGAUGCGGCAGCUAGCGUGAAGGCACGCUCGCGAGUUCGGCACUCGCUUUCGGUCGGGGGGGCCAUUCAAUUAAGCUGCAUGGACGCACGUAGGACGGCGACGUUCGUUAGCCACGGACGCCGGAACGCUUGCGUCCACUUCCCCGGAAAGCUCGACGGAGAGAGGGAGAAGGCCCCGGUAGGCCUUUGCUCACCCUGCAACAAUAUGCUGUCGGGCCGGGUCGACAUCGACAGCCCGAGGAGGAGGAGAUGCGUUAGCUAUCCAGACUAUCUCGACAGAGGAGCUCAUGGUGAAAAAAGGAUUAAGUUUUUCUCUCGCGGUUCAGUAGCUUGGACAUUAAUGGCAGCCAGCUCGAGCGGUUGUGCUAUCACGUCCGGUGAUACAGAUUACAAGGGGACACGGGGAGUAAGUGCCAGGGGUGCAAGAGGCGGCAAGCGAAGCCGGCGUGGGGACCGACCGCUGCACGCUGCAACCUGCAAACGGAGGUGAAACCUCUGCCCUGCUACAAG
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
1
NEP:
0.2%
LE_num:
LEP:
95.93%
ME_num:
MEP:
3.86%
HE_num:
HEP:
0.0%
Type:
MCR ()
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
anther
Tau :
0.95
Avg Expression:
1.76
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
Num. | Condition | log2(FoldChange) | Padj |
---|---|---|---|
1 | Nipponbare // shoot // No_DIS;Fr13_inoculated--/--Nipponbare // shoot // Drought_during_3_days;Fr13_inoculated | 2.36658608661297 | 3.26438238982132e-05 |
2 | Nipponbare // shoot // Drought_during_3_days;_mock_inoculated--/--Nipponbare // shoot // Drought_during_3_days;Fr13_inoculated | 3.81916781853193 | 5.2921905771119e-05 |
3 | Nipponbare // shoot // "Control, 22C for 10 min, then 30C for 50 min"--/--Nipponbare // shoot // "Heat, 42C for 10 min, then 30C for 50 min" | 5.68353050761095 | 0.00551061844069545 |