Chr:
Chr11
Start:
12552514
End:
12553848
Strand:
-
Ref_name:
LOC112936865
Sequence
(XR_003239285.1):
UCAGAGUUUCAGAAUUCCUCUUCCGAUAUUCAGACUUCUUCAGAUGACCUCCAUUUCCAUCCCAGGUUCUGACAACCACGCAGCCCCUCCUCCCAAUCCACCUCCACCAACUUUCAUGACUCCCAAUCCACACCUUCCUAAUCGUCUCCCUCUAGCAAGUGAUUGCUUAGAGGGGUAAGCAGCCACAAGAUCCCCAGAGCCGAGCUCUUCCCCUCCGGUGCUGCCGUGGCUUUGGGCCAAGCCAAGCACAAGCAGGAGAGGCCCAUCAAUCCCUUCCUCGUCAGAUGCAGUUUUCACUCUUGAUGGUGGAGGCACAGCUCGAUGGCAUGAUGGUUCAUAGUGGUCUGCCGAAGUGUGGAGAUUAUGGAUACCCCAUAUCUACACGGCAUGUAUAGUUUGGUUGGGUACGGGGUACCAGAUAUAGAUAGAAUAUCUUUAGGAGGACUCGGGUUAGUUUCUAAACUUGUAUGUCAAGGAAAUACCCGGGAUCCUAGUCGGUUACGAUUGUAUUUUAUCUGUAAUCACAUAUUCCGUUAGGGAUAUGGACUGUAUUUUGUAAUACGAACCCCUUCCCCUAUAUAAGGAGUGGUCCGGGUCCCUCUAGGGACACGAUUUUCUCCCAGAUUAUACGAUCAAUAAUACACUCGGCGGAUCAAUCCCCGGACA
Sequence
(XR_003239286.1):
GCCGUCCAUUCCCUGUAUAGCUUCCAUCUCCGUUUCUUCAGAGUUUCAGAAUUCCUCUUCCGAUAUUCAGACUUCUUCAGAUGACCUCCAUUUCCAUCCCAGGUUCUGACAACCACGCAGCCCCUCCUCCCAAUCCACCUCCACCAACUUUCAUGACUCCCAAUCCACACCUUCCUAAUCGUCUCCCUCUAGCAAGUGAUUGCUUAGAGGGGUAAGCAGCCACAAGAUCCCCAGAGCCGAGCUCUUCCCCUCCGGUGCUGCCGUGGCUUUGGGCCAAGCCAAGCACAAGCAGGAGAGGCCCAUCAAUCCCUUCCUCGUCAGGAAGUCUUCACAAAGGUUUAAGGUCGGUCAGAUAACUAGACACCUCGUGUUAAUGUUUCCAAUGGAAUGUUGCUUUUCAAGUGCAGAGGAAGGUUCUGUGAUUUUCUGGUUGAAUAGUAGAGAAAUUGAAGUGGAUUCCUCUAAGCAGAUAAGUUCAAUGGCAUAAGGAAUACGAUCAGUAGCUUGCUCACUGCAUAUAACACUGUUGAACAGGC
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
1
NEP:
0.2%
LE_num:
LEP:
66.87%
ME_num:
MEP:
31.1%
HE_num:
HEP:
1.83%
Type:
HCR (High-Capacity ncRNA)
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
caryopsis
Tau :
0.93
Avg Expression:
4.76
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
Num. | Condition | log2(FoldChange) | Padj |
---|---|---|---|
Tip: OSA-LNC112936865 is not a differential expression ncRNA. |