Chr:
Chr10
Start:
22057029
End:
22058456
Strand:
-
Ref_name:
LOC112936622
Sequence
(XR_003238913.1):
UCAACGCCACGUGGACCGAAGACUCGGUCAAUAUCGUCACAUAGACGCCACGUCAGUGAAACCACCCUAAAACUGCCGAGGGAGUCAAAUUUCACCGGUUUUGCAAGUUCGGGGGGUCGAGAUUUCUGGUAUUACGGUUGAGGGAUACUACGAUUUAGAUUCGGUGGUCAGUUAAGGGAGUCAAAGUGAUUUUAUUCCUAUAUUAUCUCCUCUGCUCCGCCGGUUUCCGACUCCGACAAACUGGGCGCAGCGGAGAUCGGAGAUCGCCAGAUCGGGGAGGGAACCAGAGCGCCGCCGCCUUUCGUCCGGUGGGGAUUCUCGUCUCGCAGGCAGGGCGCUGUACAACCCCAACGCCGAGACAGAGGAAAAGGCUUGAGGGAGACCUUUUCUAAUCCUGCUCCUCUCGGCCAGGUCCGCUCCCUCUUUGUUUGCUGCUAGCAAUUUAAAUUCCACCGAGGGGUUCUAUGCAAAGUGAAGUAAUUGUGAUGAACUGAAAUUUUUAUGCUCCUUGUGCAGUUUUAGAUAUUGAUGAGUAAUUUACAUUGGAUAAGUUAUAAGCUAUAGGGUAAACCCUCUUCAUUUAGGCAAGCUGUUGGAAUGCCUUUUUGUUUUAGUUAGAAUGUUGGAGGAUUGCUUGGGAACGUCGGUACCAACUACAAUUCCUUAAUUUGGAAAUCUUGGGCCCCUGCGAAAUGCAAAUUUUAUGCGUGGCUUGUGAUACAAAAUAGAGUUUGGACCUCCGACCGACUAGCUGCAAGAGGAUGGCCAAAUAGUGGAACGUGCCCCCUAUGUCGUGCGACGAAUGAGACGGCAUUUCACCUAAUCGCUUCUUGUAGAUACACCAAGAGGAUCUGGCGCCUAACGGCUAGCUGGGUGGCCUAUCAGUAAUUGGACCCAACUCAUUGGGAGCCAUACCAAAGUGUCCAAGAAUGGUGGGAAAUGCUGACUAACAUAAAUGAAGUGCCCAAGAAAGGAUUGAGAUCCUUAAUCCUACUCAUCAUGUGGGAAAUCUGGAAGGAAAGGAACCAGCGGAUCUUUGAGCAUAAGGAAACAGCGGCCCCCAAUCUUAUAGCGAAGAUAAAGGAAGAGGCAAGAACCUGGAUCAUAGCAGGCGCAAGGCGUCUCGGAGAAUUCCUCCCAUCUUAGUCAUAGUCUCUGUUUUCAUGUACAAUUUUCUUUUCUUGCCUCUAGGGACUGUAUUUUUUUUACCUCUAUAUCCAAUGAAAUAGCACAAUCUCGUGCUGAUUCUUUUCAAAAAAAAAUGGUGUAUGGUACAAUUAACAGAGCAUUAAUUAAUGGUCCAAUACCCUA
Sequence
(XR_003238914.1):
UCAACGCCACGUGGACCGAAGACUCGGUCAAUAUCGUCACAUAGACGCCACGUCAGUGAAACCACCCUAAAACUGCCGAGGGAGUCAAAUUUCACCGGUUUUGCAAGUUCGGGGGGUCGAGAUUUCUGGUAUUACGGUUGAGGGAUACUACGAUUUAGAUUCGGUGGUCAGUUAAGGGAGUCAAAGUGAUUUUAUUCCUAUAUUAUCUCCUCUGCUCCGCCGGUUUCCGACUCCGACAAACUGGGCGCAGCGGAGAUCGGAGAUCGCCAGAUCGGGGAGGGAACCAGAGCGCCGCCGCCUUUCGUCCGGUGGGGAUUCUCGUCUCGCAGAACACGCAGGCAGGGCGCUGUACAACCCCAACGCCGAGACAGAGGAAAAGGCUUGAGGGAGACCUUUUCUAAUCCUGCUCCUCUCGGCCAGGUCCGCUCCCUCUUUGUUUGCUGCUAGCAAUUUAAAUUCCACCGAGGGGUUCUAUGCAAAGUGAAGUAAUUGUGAUGAACUGAAAUUUUUAUGCUCCUUGUGCAGUUUUAGAUAUUGAUGAGUAAUUUACAUUGGAUAAGUUAUAAGCUAUAGGGUAAACCCUCUUCAUUUAGGCAAGCUGUUGGAAUGCCUUUUUGUUUUAGUUAGAAUGUUGGAGGAUUGCUUGGGAACGUCGGUACCAACUACAAUUCCUUAAUUUGGAAAUCUUGGGCCCCUGCGAAAUGCAAAUUUUAUGCGUGGCUUGUGAUACAAAAUAGAGUUUGGACCUCCGACCGACUAGCUGCAAGAGGAUGGCCAAAUAGUGGAACGUGCCCCCUAUGUCGUGCGACGAAUGAGACGGCAUUUCACCUAAUCGCUUCUUGUAGAUACACCAAGAGGAUCUGGCGCCUAACGGCUAGCUGGGUGGCCUAUCAGUAAUUGGACCCAACUCAUUGGGAGCCAUACCAAAGUGUCCAAGAAUGGUGGGAAAUGCUGACUAACAUAAAUGAAGUGCCCAAGAAAGGAUUGAGAUCCUUAAUCCUACUCAUCAUGUGGGAAAUCUGGAAGGAAAGGAACCAGCGGAUCUUUGAGCAUAAGGAAACAGCGGCCCCCAAUCUUAUAGCGAAGAUAAAGGAAGAGGCAAGAACCUGGAUCAUAGCAGGCGCAAGGCGUCUCGGAGAAUUCCUCCCAUCUUAGUCAUAGUCUCUGUUUUCAUGUACAAUUUUCUUUUCUUGCCUCUAGGGACUGUAUUUUUUUUACCUCUAUAUCCAAUGAAAUAGCACAAUCUCGUGCUGAUUCUUUUCAAAAAAAAAUGGUGUAUGGUACAAUUAACAGAGCAUUAAUUAAUGGUCCAAUACCCUA
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
1
NEP:
0.2%
LE_num:
LEP:
50.41%
ME_num:
MEP:
49.39%
HE_num:
HEP:
0.0%
Type:
MCR ()
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
root_differentiation_zone
Tau :
0.67
Avg Expression:
1.92
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
Num. | Condition | log2(FoldChange) | Padj |
---|---|---|---|
1 | Amaroo // embryo // dry seed 0 h--/--Amaroo // coleoptile // 4dA | 2.19822375476235 | 0.00077835330877266 |
2 | Amaroo // embryo // dry seed 0 h--/--Amaroo // coleoptile // 4dN | -4.01115253144596 | 0.0171512918982878 |