Chr:
Chr9
Start:
15609818
End:
15618603
Strand:
+
Ref_name:
LOC112936448
Sequence
(XR_003238655.1):
CUCUCUCUCUGACCAGUGGGACCGUCUUGUCGGUGUGAUAACUGGAUAGGCAUGGAUUCCCAGUCCCCACCCGCUGUCCGGCGAAGCGCCGCCCCCGGCGAUGAGAGCGACGCCGACGGCGGGCGGCGGAGACGACGGAGAGGGAGGGAGGGUUUCGAGAGGAGCGCUGCGGAGAACAUGGCUGAUACUGGAAUCUCGCCGCAUCCGUUCCGUCGAAAGCAUUCGCCAGAUCUCGCCGCGCCCCGUCCUCUCUCCUCUCCCUCCUUAUGCCGCCCGCAUCUCCGCCUUGUGUCUCCUCCUGACGCCAGCGGGACGGCGGAGAAGAAUCGGUAUGCGACGGGGCAGUCCGUGCCGGACGCGGCCGCUCUCCGGAGGUGGAGGAGGGGCUGUCGGUUGCUCGCGAAUGGGAGUGGAAGAGAAGCAGCAAUGCGAUUUGCAGUUCAGACAUGCGGAUGCGGACAUAAUGUGGGGUGCAAACAUAAGGUGACCAGGCUCGAUAUUGUUGAGACAUGAAAAGCUGAAUUAGCCGAGUUACCAUUCCUCUAUUAGCCGUUUCUCGAUGUUCUGUGAGAUGCAAUAUCCUGACUUGUUUGGAUCCCUGAAGCUGGGCUUAUCUCUAUGGAUAUUUCUCCCUCUUGUUGGCAGAGAGUCAUCAUCAGGGCUAUUAAAAGGGCUGAGGUUGAAGCAACUCCUGUGACUAGAAAAAGUCCUGAAAAGCUGUUGAAGUUUAGACUGCUUGAGCCGAUCAUGGUGCCAUCAUUCUGACAGGCAUGCUGGUCCUCAAUCCAUUUCUUUUCUAUAUGAAUUAUAGAAUCUCCCUCUGUUAUGUUGAGGAUUGCCCUUGAGAAGUCAUAAACUAGUGGGGAUCGUUUGGGAAAUGCCUACACAAGAAGUUGAACUGAUUCAGUUAUGUACAAACUGAUAGCUUGGACAUCAUCUCCAUUGGAAUCUCUAAUGUGGAGAACCAGCUUUGUCUUGAAGUUCCUGUGGACCGAGUAGAAAUCUUCGACAGCCAUCAAAACGCUGGUACGUGCUAUUUUGCCCACCAGCGACUUCAGGUGGAGGAUCACCCCAACAUCCAGUGUGCCUGCUCCAUUUUUGGUGAUAUUUUGAGCAACUGUCAGACUGAGGAACAAGAAUAAGAAUGCAGCCCUCCCAACUGCUCUCCCCAUCCCGGAUGGUUCUACUGGUUACUGAAUGUAUGGUGCUAUGCAGUCUUAUAGCACUGAAUUUUCAUUGUUCUGCUUUGGUCAAAUUGCAUUAUAGUAUUCUUUGUCUCUGAAUUGAAAAUUUAACCUUCCUUCUGGCUAUCUACUGCUAUUUCUUUGGUAAGAAGCUAAACGUUCUGUUUGUAAGUAUAAAAAGAUAUGUUUCUGGAUAGCUCCGUGUUAAGGUGACGACUUUGGGAAUUCAAGAAAAAUCUGGGUUGCAAGUUGCAGACGCGGGAAGAAUGAGCUGGCAUGUUGUCAGUGCAGCAAAGCAAAUCAGUGCAUGGGACUUCCUGCUGCAAAGCAAAUCAAUGCAUGGGACUUCCUUGCGAUGCCAAGUGUAUAUUCUGACAAACAAUUAAAAUAGUCGGGAAUUGUUAGAUUCAGUUGACAUUCGACUGCCAGAUGCUGUUCCUUGAAGUCUCAAGGACCAUCCAGUAUCAAUAUUUAUCCAAAAAGAAUCUACAAACUGUAAAAGAUGCAGGACAGGACGAUAGCAUGAAUAAAGUGAAGAUCACUGGAGUAGCAACGCUUAUAAAAUCCUCGUUUGGAAGAAGCUAGUCUGACGUACGUUGCUGGCAUGUGGAAGAUUAGUUCAGAAUUAAAGGUUUGAACCAGUAAUAGUAGAUAAGAUGAGCUAAUUGUACAUUUAUCCUUUAUUUUUGAGAAAUUGUACAUUUUGCUAUGGACUGGCAACCGGUUCUAUAAAUUAUCAUCGACGAAUAUGAAUACUAUAAAAUGUCAUUACGCAACGUUUUUUUC
Sequence
(XR_003238656.1):
CUCUCUCUCUGACCAGUGGGACCGUCUUGUCGGUGUGAUAACUGGAUAGGCAUGGAUUCCCAGUCCCCACCCGCUGUCCGGCGAAGCGCCGCCCCCGGCGAUGAGAGCGACGCCGACGGCGGGCGGCGGAGACGACGGAGAGGGAGGGAGGGUUUCGAGAGGAGCGCUGCGGAGAACAUGGCUGAUACUGGAAUCUCGCCGCAUCCGUUCCGUCGAAAGCAUUCGCCAGAUCUCGCCGCGCCCCGUCCUCUCUCCUCUCCCUCCUUAUGCCGCCCGCAUCUCCGCCUUGUGUCUCCUCCUGACGCCAGCGGGACGGCGGAGAAGAAUCGGUAUGCGACGGGGCAGUCCGUGCCGGACGCGGCCGCUCUCCGGAGGUGGAGGAGGGGCUGUCGGUUGCUCGCGAAUGGGAGUGGAAGAGAAGCAGCAAUGCGAUUUGCAGUUCAGACAUGCGGAUGCGGACAUAAUGUGGGGUGCAAACAUAAGGUGACCAGGCUCGAUAUUGUUGAGACAUGAAAAGCUGAAUUAGCCGAGUUACCAUUCCUCUAUUAGCCGUUUCUCGAUGUUCUGUGAGAUGCAAUAUCCUGACUUGUUUGGAUCCCUGAAGCUGGGCUUAUCUCUAUGGAUAUUUCUCCCUCUUGUUGGCAGAGAGUCAUCAUCAGGGCUAUUAAAAGGGCUGAGGUUGAAGCAACUCCUGUGACUAGAAAAAGUCCUGAAAAGCUGUUGAAGUUUAGACUGCUUGAGCCGAUCAUGGUGCCAUCAUUCUGACAGGCAUGCUGGUCCUCAAUCCAUUUCUUUUCUAUAUGAAUUAUAGAAUCUCCCUCUGUUAUGUUGAGGAUUGCCCUUGAGAAGUCAUAAACUAGUGGGGAUCGUUUGGGAAAUGCCUACACAAGAAGUUGAACUGAUUCAGUUAUGUACAAACUGAUAGCUUGGACAUCAUCUCCAUUGGAAUCUCUAAUGUGGAGAACCAGCUUUGUCUUGAAGUUCCUGUGGACCGAGUAGAAAUCUUCGACAGCCAUCAAAACGCUGGUACGUGCUAUUUUGCCCACCAGCGACUUCAGGUGGAGGAUCACCCCAACAUCCAGUGUGCCUGCUCCAUUUUUGGUGAUAUUUUGAGCAACUGUCAGACUGAGGAACAAGAAUAAGAAUGCAGCCCUCCCAACUGCUCUCCCCAUCCCGGAUGGUUCUACUGGUUACUGAAUGUAUGGUGCUAUGCAGUCUUAUAGCACUGAAUUUUCAUUGUUCUGCUUUGGUCAAAUUGCAUUAUAGUAUUCUUUGUCUCUGAAUUGAAAAUUUAACCUUCCUUCUGGCUAUCUACUGCUAUUUCUUUGGUAAGAAGCUAAACGUUCUGUUUGUAAGUAUAAAAAGAUAUGUUUCUGGAUAGCUCCGUGUUAAGGUGACGACUUUGGGAAUUCAAGAAAAAUCUGGGUUGCAAGUUGCAGACGCGGGAAGAAUGAGCUGGCAUGUUGUUGCAGCAAAGCAAAUCAGUGCAUGGGACUUCCUGCUGCAAAGCAAAUCAAUGCAUGGGACUUCCUUGCGAUGCCAAGUGUAUAUUCUGACAAACAAUUAAAAUAGUCGGGAAUUGUUAGAUUCAGUUGACAUUCGACUGCCAGAUGCUGUUCCUUGAAGUCUCAAGGACCAUCCAGUAUCAAUAUUUAUCCAAAAAGAAUCUACAAACUGUAAAAGAUGCAGGACAGGACGAUAGCAUGAAUAAAGUGAAGAUCACUGGAGUAGCAACGCUUAUAAAAUCCUCGUUUGGAAGAAGCUAGUCUGACGUACGUUGCUGGCAUGUGGAAGAUUAGUUCAGAAUUAAAGGUUUGAACCAGUAAUAGUAGAUAAGAUGAGCUAAUUGUACAUUUAUCCUUUAUUUUUGAGAAAUUGUACAUUUUGCUAUGGACUGGCAACCGGUUCUAUAAAUUAUCAUCGACGAAUAUGAAUACUAUAAAAUGUCAUUACGCAACGUUUUUUUC
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
1
NEP:
0.2%
LE_num:
LEP:
1.63%
ME_num:
MEP:
89.02%
HE_num:
HEP:
9.15%
Type:
HCR (High-Capacity ncRNA)
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
carpel
Tau :
0.58
Avg Expression:
8.51
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
| Num. | Condition | log2(FoldChange) | Padj |
|---|---|---|---|
| 1 | Amaroo // embryo // dry seed 0 h--/--Amaroo // coleoptile // 4dA | -1.67025293410065 | 0.00316439093903919 |