Chr:
Chr9
Start:
16037146
End:
16039360
Strand:
+
Ref_name:
LOC112936446
Sequence
(XR_003238647.1):
AUUAUAAAAUAUUUAUAUUUCAUUAACACUCAUGAUUAUUUUUAUAAAUUGAUGUUUGUUGACUCAAAGUAUACAUCUCUCAUCUAUUUUAACUUUUUUCUUCAAUUCUGCGCGGCACAAAAACUUAACAUAAUACUAAUCGGUAAUAACAUGAUAAUCGAUUCAAUAUACAUAUAAAUGGUCAAACCAUAAUGAUUAGCACUUGUUGAAAAGCAUCUACAUGGAUAAAUAAAUAAAUUAUUAUAGAUAAAUAAAUUAUUAUAGAUAAAAGUAUAUUAGUUAAAUGGAUGAUAUAAACUUGUAUUCGGGUUAUAUGAAACAUUUUACCCAUAAAUAUAAGAAUUUAUAAAACAAAUUGAAAAGACAAAUUUUGCUCCAGAACAUCGUGACUUCGCAGUUGUGACUGUAGGAUACCGCACGAAGUGACUUCUGGAGGAAGACAUUCAAUAAGCAUAAGAAUUUACCAACGGACACCGCACCCAUUAAAAUAAUAAUUUUCAGUUGAAGAGAAGAGAAAAAUCGUGUGAAAUAUCUAAAAUACCCUUGGACCCAUAUGUUAGCUCUCCCACCUCACUUCUCUCUAUCCCCUCCGUCGGCGUCGUGGGGGCCAUUGCUGCCGACGUGAAGCAGCGCAGAUUGGCAAGAGAGGGAGGCAUCACGUGCCAACCAGCCAUGGCGGCACUUAAAAACAAUAAAAACAAAUCAUAAUGAUUGAGGAGGUCACUGGCGUGAGGAGAGUAGCACCACCAUGGAGAGGGUGUUGCCGCUGAGGGGCAAGCGUCACGUGUUGUAGUCUUCGGAGAAAAAUAGCGAGGGGGGAGUGAGCCAAGAGUGGGUGCCGCCGCAGAGAGGUGAGGGAGCGUCAUCACACGUCACCGCCAAGGUGCUGAAUCAUGAGAGUGAGAGCGAGGGGAAGGUGGGGAGAAUGUGAGAGAUGAUAAGGAUGGGGACUGGGGAGGAGGAUAAGGAUGAAGGGAUGACCGUGUGAGGCUCAACUCAGCUUGGUGAUUUAGGGUGUCGGUUUCACCUAUUAGAGCAUCUCUAGCAGCCUCUUUAAAUCUGACUCUUCAAAUAUUUAUUUGGCCAGCUUGCCAAAACAAAUGCAUAGUUAAAUUUAUCUUCACUCCAACACCAUCUCCAUUACACUAUCCAAUCUAAUUGUAGAUCCUACAUAUCAGCAUCUCUACUAUUUCACUCCUUCAACCCCCCCCCCCCCCUCUCCUCUCUCUCUUCUCCCCUCUUCUCUGCCGCACCAUCAGUGGAAUCCACGCGUGGACGGCGGUGGUGGAGGCCGCGCAGGAGCAGGGAGGUGGCGCUAGUCAGCAUCGCCACCGCCGUCCUCGUCGUCACGGGCAUAGGAGAACGAUGAGAACAGACUCUGAGUAUGCCAGCUGGAUGCUUAGACCUUUGGUGAAAUAAACCAGACAACAGCAUUCAAUAAAUAACGCAGCUGUACAACAAUGGUCAGUGGCUCGGUGCAUACAAUACGAACUUCCGACACACCUCUGCAUCUACCCCUCCACCCCUCCGUCAAAAAAAAAAAAACCAAUCUUAGCUACGAACAUAGACAUAUGCGUGUUCAAGUUCGUAGCUAGGGUUUGUCUUUUUUUGAGGCGGAGUAGUACAUCACAGCAUUGACAAAGUUAAUGAGAUUACAGAGGAGCCCUUGCAGGCUAAGAGGACAUAGAGGAAAGGAGUGAAGAGGCCUUUUCAUGUCAACACAUGCCUGAAAUGGAUCAAGAAUCCCCUUGAAAGUUCUCAUCUUCACAGCUGAAAAUUAAAACCAUAAGCAAUCUGUCUGAGGAGGUUUUAUCCUACCCAUUAAUGCCACAGUGCAUGUGUGUUGUGUUGGAUUGGGAUACUUCUGGUUUAAGAAAUUCGGAGGAAAGCCGAGGCUUCAAAGACAAAUGGCAGAUAGGUUUGCAUGUUAA
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
1
NEP:
0.2%
LE_num:
LEP:
89.02%
ME_num:
MEP:
10.77%
HE_num:
HEP:
0.0%
Type:
MCR ()
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
shoot
Tau :
0.94
Avg Expression:
1.29
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
Num. | Condition | log2(FoldChange) | Padj |
---|---|---|---|
1 | Nipponbare // shoot // "Control, 22C for 10 min, then 30C for 50 min"--/--Nipponbare // shoot // "Heat, 42C for 10 min, then 30C for 50 min" | 6.24752429104735 | 0.00791019189317216 |
2 | Amaroo // embryo // dry seed 0 h--/--Amaroo // coleoptile // 2dA | -5.00226603238898 | 0.0105422892730622 |