Chr:
Chr9
Start:
6250684
End:
6252351
Strand:
+
Ref_name:
LOC112936425
Sequence
(XR_003238600.1):
UUUUACUGAACUUCUUUUUUCUUCUUCAUCUUACCAUUUGUACGAUACUCCUCAUACAUCCCUUGUUUUUUCAGCACAAGGCAUUAUAUAUUUGCUUUGAUGUUUUAGGCACUCAAAAUGCGAGAUUGGUCUGAAUGAGAGGAUAAAGGGAAACAAUGGGGAAACGCCGUUUACCGCCAUUGCGGAGCAAGAAGAAUAGCCAGCAAAAACGCAGGAUGCCACCAUUGUACACCGCCGCUGCACGGCCUCCUCAAGAAGGCUGGAGCAUCAGAGAGCGUGUCAAUUUCAGGAUCGCAAUUGGAAGAUUUGGUCAGGACUGGCCUAGAGUUGCACAGUUUAUCAGCACAAAAUCUACUGGUCAAAUCUGUGUCUAUGCCGAGGAAUAUUUCCUGAAGCGUCACACACAUAGCCCAGUGAAGAAUAAAAGGAUUCUGAUUAUCAGCUCAGGUUGUUGACAGGAGCAACACAUUUAAAGUAUUUCUACGCUGAAGCAACUGCAAUUGAAGAACUGAAUCAUCUGAAUUGUAAACUAUGGGGUUGUUCAGAUUAAUAACAUUUUAAACCAUACCAUUUUUUGGUAAAAUUGCUAAAUAAAGUUUUUUUUAUCAAACUUUAGUAAAUGCAUAAGGAAUCCUGCCAACUUGACAAUAUUGUCAAUUUACCAAAAUUUGGUAAGGUUUAUUUUGGCUACAAUCUGAACAGCCUCUAUAUCAGUCUCAAAUGACCUCAAGGUUCCACCACAUGAAUCAUUGAUGGUAUUAUUUCAGCUACAAAUAGUUACUCAAACUGCUAUCUGCACCUUGCAAGGGAAAUCUCCACUGGAAGUGUGGCCAAAUUUCACAAAAAAAUUCUACUCAUUGAAGAAAUAAAAGGACUGUUGAGGUUACAACAACAUAAACUAAUACAACAUUUCAACAAAACAUCAUGCAACAUUGUUUCACAUAUCCCAUUUCCACGCACCUAGUGCCCUACCACUACCUAACCUAGUCACAUCUGAUAUCACAUGUCAUUGGAUUACAGUAUAUACAUACGUGCACAUUGAUUGAACACAAAUGCACCAAGUGUUGAAACAUUAUACAGAAAGGUUGAUUUAUCAAUGAGAAGGAUUCCCCCUUCUCCAAAUGAAUAAUCAAUGAGAGAGCACGGUGUUAGAUACUGACCCUACAAGCCUAGACAAAAAAAUGCUCUACUCUUUCACCUACAUAUUAAUAAUUUUACAACAGCUGUGAAAAGAUGAUUAAGCCCAGAUCGGAAGAGAAACGUUAGCAGAUAUAGCCUGGCCACACCCAGUAUUCACUGAGGGGGUCUGAGCCU
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
1
NEP:
0.2%
LE_num:
LEP:
88.41%
ME_num:
MEP:
11.38%
HE_num:
HEP:
0.0%
Type:
MCR ()
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
embryo
Tau :
0.91
Avg Expression:
1.44
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
| Num. | Condition | log2(FoldChange) | Padj |
|---|---|---|---|
| 1 | Amaroo // embryo // dry seed 0 h--/--Amaroo // embryo // 24hN | -1.65540823810733 | 0.00148616752238005 |
| 2 | Amaroo // embryo // dry seed 0 h--/--Amaroo // embryo // 12hN | -1.67281666300317 | 0.000940224918475976 |
| 3 | Amaroo // embryo // dry seed 0 h--/--Amaroo // coleoptile // 3dN | -1.44270293744972 | 0.00192164686716287 |
| 4 | Amaroo // embryo // dry seed 0 h--/--Amaroo // coleoptile // 4dA | -3.69724158051561 | 3.18646461121016e-05 |
| 5 | Amaroo // embryo // dry seed 0 h--/--Amaroo // coleoptile // 4dN | -1.44993933774114 | 0.00955049373793937 |
| 6 | Amaroo // embryo // dry seed 0 h--/--Amaroo // coleoptile // 3dN1dA | -2.41334873491277 | 0.000116163806739469 |
| 7 | Amaroo // embryo // dry seed 0 h--/--Amaroo // embryo // 12hA | -2.06788085609114 | 2.22575857059692e-05 |
| 8 | Amaroo // embryo // dry seed 0 h--/--Amaroo // coleoptile // 3dA | -2.62841377927357 | 2.1534105374835e-06 |
| 9 | Amaroo // embryo // dry seed 0 h--/--Amaroo // coleoptile // 2dN | -1.65095075634137 | 0.000233905371942294 |
| 10 | Amaroo // embryo // dry seed 0 h--/--Amaroo // embryo // 24hA | -2.10601222512176 | 0.000155839628456901 |
| 11 | Amaroo // embryo // dry seed 0 h--/--Amaroo // coleoptile // 2dA | -2.00915212128131 | 3.8564762797622e-06 |