Chr:
Chr9
Start:
18139227
End:
18139912
Strand:
-
Ref_name:
LOC112936420
Sequence
(XR_003238577.1):
GCUGGCCGGCCUCGACACAAGGCAUUUACCCGUGCUCCUCCCGGCUCCUGCAGUCAUUGAGGGAUGGAAAUGGACCCGACCAUCCACCAGAUUAUCUUCUCGUGCAUCAUUAUGCUCACCAGAAAGAAACUGGAUAGGGCGAGAGCAGAUGAUCACUUCAGAGCUUGUUGUCAACAGGAGCAGGGUCCUACCUGUCGGCAGCGGGCCAUCUGGUGCUAGUAAGAGCAGAGGAUUCCUGCAAACAAAACAGCUCCAAGAAAUAACAGCCAAAGAACUCAAAGUAAAAAAAUGGAACAAUGUCUGCAUGAGAUUAGCUGGCAAUCGUCUCUUUUGGGGUAAGUCUAAAGCUAAAAAACAUAUCCAUGUUAAUGAAGAUAAGAGUUUCAGCAUCGGAUUCGUUCAUCUCGCAGACCCUGCUCCCUGAGUAGACUGUCCUGAUUAACUAGUUUACACCAAAUUUUAUUUUUGUCACUACAAUAUAAUU
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
1
NEP:
0.2%
LE_num:
LEP:
81.1%
ME_num:
MEP:
18.7%
HE_num:
HEP:
0.0%
Type:
MCR ()
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
carpel
Tau :
0.90
Avg Expression:
1.54
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
| Num. | Condition | log2(FoldChange) | Padj |
|---|---|---|---|
| 1 | Amaroo // embryo // dry seed 0 h--/--Amaroo // coleoptile // 3dN | -5.27123717973168 | 0.00304137196444945 |
| 2 | Amaroo // embryo // dry seed 0 h--/--Amaroo // coleoptile // 3dN1dA | -3.72306921682078 | 0.0440383646020283 |
| 3 | Amaroo // embryo // dry seed 0 h--/--Amaroo // coleoptile // 2dN | -4.59801885130908 | 0.00689363573750562 |
| 4 | Nipponbare // leaf // Watered;Long_Day--/--Nipponbare // leaf // Drought;Long_Day | 2.79851751549062 | 0.0352472900266341 |
| 5 | Amaroo // embryo // dry seed 0 h--/--Amaroo // coleoptile // 2dA | -2.85958452106739 | 0.0212408102534983 |