Chr:
Chr9
Start:
8809642
End:
8832957
Strand:
+
Ref_name:
LOC112936363
Sequence
(XR_003238454.1):
UCUCCUGCUGGGCAGACGACGCCUGCAGGCUGACGGCUUUUGUCAGCGGCCCAACGGCGUCGUCACCAUCACCUUGCGUCCGUCCAUCCGGAACAGUGCACUAGAGCAGUUGAACAGUGCGGGGUUCCUAACCACACAGCCUAGCGCUGCGAACCACAACUAGCGAACUAGCCUUAUCAUUUCCGUUAGAUGUUUGGAUCAAUAAUGACCGCAAAUUCAUAGCUGUUACUGCAGCUGACCCUGGAGGCCUGGACGCCCCAUGUCUUGGAAAACCGUGCACGCUUUGUAUAUAAUCACAUGAAGCCCCCGCGUCCUGCUAGACCCUUCUCACAGCGCCAGAUUUUGAAGCUUGCAGCAGAUCGAGAUAUUCGAGUUGGGUCGCCAGCUAGGAUGUUACACUUAAUCUCGCGAGGACUCAGUCUCCUGCCACGCGUUGCAUCCGCAUCUGAAGUCUACGCCGCGUCACCGCCGCAAUCCUUUCGCCCUACUCCGACGCGGUGUCCAAGUGCCGUCCUCUUCCGGCCUCCGAUGCGGUGUGGCGGCUCCUCCUUUGGCCGCAGCUUUUCCCCUCCCCUCGGUCCCCUCCUCCCCUACGCCUCUCGGCUGCCCCUGUGCGGUGCGGCAGCUCGUCCUUUGUCCAUGGCCACAACUUGUCCCCUCCCCUCCGUCCCCUAUGCAUCUCGGCUGCUGGCACCUACGCAGUCUCCGGCACAGGAUCACGAUACCCUGAGUUUCUUUAUGGAAGAUGUAUGAGAGAGAUGAAGUAUUUCUUUCCUGCUGGACAUUGCUUUGCUGCUAUAUUCAUUGGAAGAAUCUGCUAUGUUGAUGGGAGAGGCUGAGUUUGAUUUAUGUUGUGUGCCAAGUUCUGGACCUAGUUCCUUGUCUUUUGAUAUAUGUAAUGAACCUACUUGAUUUUGCUGAAAGUAUGAAUGUAAUAAUAGUAAAAAAGAAGUAGAUGUUCUGAAAGUUUGUAGUUUC
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
1
NEP:
0.2%
LE_num:
LEP:
56.91%
ME_num:
MEP:
34.76%
HE_num:
HEP:
8.13%
Type:
HCR (High-Capacity ncRNA)
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
2nd_leaf
Tau :
0.87
Avg Expression:
5.23
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
| Num. | Condition | log2(FoldChange) | Padj |
|---|---|---|---|
| 1 | Nipponbare // shoot // No_DIS;Fr13_inoculated--/--Nipponbare // shoot // Drought_during_3_days;Fr13_inoculated | -1.24653173123705 | 0.0241649520324796 |
| 2 | IR64 // panicle // Dawn--/--IR64 // panicle // Dawn + 10.5h | -2.16573823922594 | 0.00125784872268419 |
| 3 | IR64 // panicle // Dawn--/--IR64 // panicle // Dusk | -1.60459202868802 | 0.0196990957236592 |
| 4 | Nipponbare // shoot // Drought_during_3_days;_mock_inoculated--/--Nipponbare // shoot // Drought_during_3_days;Fr13_inoculated | -2.80500975533712 | 5.48611307777282e-11 |
| 5 | Nipponbare // leaf // 48_hrs_after_mock_inoculation--/--Nipponbare // leaf // 48_hrs_after_inoculation_with_B8_12 | -2.04160547849864 | 0.0360731433225885 |
| 6 | Nipponbare // leaf // Watered;Long_Day--/--Nipponbare // leaf // Drought;Long_Day | -6.4712913165975 | 3.79815107254555e-07 |
| 7 | Nipponbare // leaf // Non-inoculated--/--Nipponbare // leaf // Inoculated with Pyricularia oryzae | -2.81731500529571 | 0.0246289636544984 |
| 8 | Nipponbare // leaf // Watered;Short_Day--/--Nipponbare // leaf // Drought;Short_Day | -5.20324283621549 | 0.000122864509100753 |