Chr:
Chr8
Start:
13505375
End:
13507013
Strand:
-
Ref_name:
LOC112936158
Sequence
(XR_003238267.1):
CGCAAUUCUCGUAUGGGCAUAGACCUAGUUGAUUAAGUUAUCUAGCAAAAGUGGUACCUCUGUAUAGUGGUUCUUAAAUCCUCGCGCAGGUGGCAAAUUUACGCCGAGCAGGGCGAUUGUGAUAAUUUACUGUGGCGCAGGUAAAUAUAUGAGAUGAAUUGUGCACAAAUUGUUUGUGAACCCUGAUUGCGAUGACAUGGUGUCAUACAAUCAGUUCUCUCUAAAGACCUCGGGAACGCCAGAACUCCUCACGUUGCUGAUAACGUUACGUUCAGAGCGCAUGGGGACUAGAGUUCAUGGAACAGGUACCACUGAUGUUAGUAACUAAAAAGCUUUGCCAUGACAAGGCUAAUGUGUUUGGCACGUCAUGGAUUGCGGGUAAUUCCUAGCCCAAAAGCACCUGGUAAUGACAUUGACGUAUACUUGCAGCCAUUAAUUGAUGAGUUGAUGCAAUUGUGGGAUGGUGUGGAAGCAAAUGAUGCUUCCUCAAAGGAGACUUUUAAUUUACGUGCUGCUUUGCUUUGGACAAUUAAUGAUUUUCCAGCAUUUGGAAACUUGUCUGGCAUGAGCACAAAAGGUAAAUAUGCAUGUCCUUCAUGCCACACUGAAUCCUGCUACCACAGACUUGUUAAUGGGCACAAAUAUUGUUAUACGGGACAUCGCCGCUUCUUGCCGAGGCGACAUGCCUGGAAGAAUAAUGAUGCUUCUUUUGAUGGCCAAAAGGAAAAGCGAAGCGCUCCAAAACCAUUGUCAGAAGAUGAUAUUAUUUCUCAGUUUGAGAAAUUUGAACAGGUGAAGUUUGGGAAAUCUGGGAAGAAAAGAAAACGCUCUAGUACAUUGUAUGGUACUUGGAAGAAAAAGAGUUUUUUUUUUCCAACUCCCAUAUUGGAGCAAGCUGACUAUAAGGCAUAACCUAGAUAUCAUGCACAUUGAGAAGAACAUUUGCGAUAGUAUCCUUGGCACCUUGCUAAAUCAAGAUGGCAAGACAAAAGAUACAAUCAAAUCUCGCUUUGAUAUGGAGCUCAUGGGAAUACGUCCUAAACUUCAUGCAACUCCAACCAGUGAUGGUAAAUAUAUAUUCCACCUUGCUUGCUACACCAUGUCUUCACAUCAGAGAAAAGCAUUUUGUGAAUUUCUUACACAUAUCAAGGUCCCAGAUGGUUAUUCUGCAAAGAUAUCUCAUUAUGUAGAUGCAAAAAAUUCUAAAAUAUUUGGGAUGAAGUGCCACGAUUGUCAUGUUUUUCUACAUAGGUACCUUCCAUUGUCAAUCCAUGGCGUGUUACCAGUAGAUGUAUUUGAGGCAAUAAUUGAGUUGUGCAACUUUUUCAGAGAACUUUGCUUCAAGAA
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
1
NEP:
0.2%
LE_num:
LEP:
88.21%
ME_num:
MEP:
11.18%
HE_num:
HEP:
0.41%
Type:
HCR (High-Capacity ncRNA)
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
carpel
Tau :
0.95
Avg Expression:
2.23
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
Num. | Condition | log2(FoldChange) | Padj |
---|---|---|---|
1 | IR64 // leaf // ethanol solvent (untreated control)--/--IR64 // leaf // gibberellic acid (GA) | 7.5307775931596 | 6.44079966341186e-18 |