Chr:
Chr8
Start:
16070006
End:
16071559
Strand:
-
Ref_name:
LOC107282032
Sequence
(XR_001548182.2):
AGAAUCAGUAGGCAAUAUACAGCAACAAUUUGAUUGAAGCAUUUCUCAACAAGAUCAUAUCCUUGCAAAAACAAGAGAUGGCCACUGCUAAGGGAACUAGUAGUUCUGUGCCACCCCAGGGUGGAUCCUCUGCAAAAUCCAAAAGGCAGGCGGACAUUAAUCAAGAAGGGUUAAACCUUCUAGGACUUGAAGGUUUUAGUACACCUCCUCCUCGGAACAAUGGUCAGGGUGCUCACAGCCUCGCAUACCAAAUCAAAACACUAGCGCCCAAAGCCAGUCAAAUGGACUUCCUAUUCCAGGUAAUGACUUGACCGGAUUGGCCAUAUAGUUAAGGUAUAUGACAGAAGAAGAUGCAGUGAGUGUCAACAAUGGUUCAUCGUUCAAGCCUGUGUGUUGCUACAAUAUCAUGUACAUAUGUACAUAAGUAGUACAUAUAGUAAAGAAUAAUGUAAAUAUUAGCUGUCAAGGUCAACGCAUGCAUGGGAAGGAAACAAUUGUAGAAGUACAUGUAAUUUGUUUAUUUAAUUUGUUCAAAUUUGUUUGUAUAUAUAAGAUGUGAAGCUGUAUAUAUUGAUACCAGCUUUGACAAUAAUGUACAGCACAAUAAUGUUGAAUAACUCAAAGUGAAUCAUUUUAUGUUUCCAAAUA
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
1
NEP:
0.2%
LE_num:
LEP:
89.84%
ME_num:
MEP:
7.72%
HE_num:
HEP:
2.24%
Type:
HCR (High-Capacity ncRNA)
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
root
Tau :
0.95
Avg Expression:
1.65
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
| Num. | Condition | log2(FoldChange) | Padj |
|---|---|---|---|
| 1 | Nipponbare // shoot // Drought_during_3_days;_mock_inoculated--/--Nipponbare // shoot // Drought_during_3_days;Fr13_inoculated | 3.96391110263942 | 0.0155240372227676 |
| 2 | Nipponbare // root // "mock,1_day"--/--Nipponbare // root // "auxin(50CM_2,4_D),1_day" | 4.32963710264115 | 2.95926775421879e-05 |
| 3 | Vialone_Nano // root // control--/--Vialone_Nano // root // 100 mM NaCl | -6.32789122571046 | 0.00110173430627243 |
| 4 | Amaroo // embryo // dry seed 0 h--/--Amaroo // coleoptile // 2dN | 6.70511180297441 | 2.23112372001881e-07 |
| 5 | Nipponbare // shoot // No_DIS;_mock_inoculated--/--Nipponbare // shoot // No_DIS;Fr13_inoculated | 3.71398490863683 | 0.039888003182301 |
| 6 | Nipponbare // leaf // Non-inoculated--/--Nipponbare // leaf // Inoculated with Pyricularia oryzae | 1.98688265265787 | 0.0136058716617283 |