Chr:
Chr8
Start:
20995128
End:
20996088
Strand:
+
Ref_name:
LOC107282020
Sequence
(XR_001548167.2):
CUCAUCUCCUUCCUCUCCUCACGACCUUCACCCAUCCCUCGACGGCGAUGAGUCGCUUCCCCUCCCUCCACGCUCCAUCCAUCUCUCCCUCCCUGCGACCUCCCGUGAUGUCAUGGAUGUGACAGGUCGGCGGGAGCGGCGCCGGCCCCGGCGGAUUGAGAUGGCUCGGAUGAGGCACUAGCAGCACGGCGGCAGAGGUAGGGGCUUGCGAUUGUGAUGCAGGAGAAGGCGAACGCAACGUGUAGGUGCUGCUCGGCUACGCCGGCGGAGGCGCAAGCCUAUAGUCUCCAGCGCCAGUGGAUCUGUUGCAGGGAGCCUGAUGCACAAGCUUUUGCAAUAGCGGAUCUGAUGAAGGAGCCAACGAUUUUGUGUCUCCCAAAGCUGAGGUGGUUCGAGAAGCUUUGCCAUUAGAAUGAGCCCAGGGUCAAUCUGGAUAAAUACACACAUGACUACAGGCCACCUUGGUGGAUACAAACACCUUUCUUUGUUCUUUCUAGUUCUUGCAGAUUAAUUCAUACUCCUUCUAGAUUGUGGAGAAGUAUUUUUUGACAGAUUGUGGAUGCAAACCAUCUUGCAGAUUGUGGAGUAGUAUUUUUUUAACGAUUUCUUUUUUCAAACUAGAGGUUCUUAAUUUUUUGUUAGCAUAUUCGGUUUAAAACUUCAUUUUUUUUUCUGGAUACCUGUGUAAUCGAUGGGUGCAGAGAACCCAGUUAAACCUUUUUUUUCAGUGAGGACAGUGUAGAGAACACAGUACAAUUCUGUGUAAUGUUGUUGUUGAGGGCAUUUUGGUAUUUUCAUGGUUGUACUAAGUUUGCAUUGGGAAUCCAGGAGUUGAAUUAUUGUGGGA
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
1
NEP:
0.2%
LE_num:
LEP:
87.6%
ME_num:
MEP:
4.88%
HE_num:
HEP:
7.32%
Type:
HCR (High-Capacity ncRNA)
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
anther
Tau :
0.98
Avg Expression:
145.64
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
| Num. | Condition | log2(FoldChange) | Padj |
|---|---|---|---|
| 1 | IR64 // panicle // Dawn--/--IR64 // panicle // Dawn + 17.5h | -3.09813263481422 | 0.0378545725908427 |
| 2 | BR-IRGA_409 // spikelet // control condition (29C) for 7 hrs--/--BR-IRGA_409 // spikelet // high temperature treatment (38C) for 7 hrs | 2.30178332118702 | 6.70842401033904e-13 |