Chr:
Chr8
Start:
23679071
End:
23681507
Strand:
-
Ref_name:
LOC107281868
Sequence
(XR_001548085.2):
ACCUCUCCCCCUUCCACCGCGCGCCGCCUCCUCCCCCCGCUUCCACCGCGCGCCGCCACCUCUCCCCCUUCCACGCUCCUCCCCAUCCACUGGGCGCCGCCACCUCCUCCUUGGCCAAAUCCGCCGCGCGCCGCCACCUCGCUCCCCAUCCACCGCGCCCCGCUUCCCCCUGUGCCUCGGCGAAAUCCUCCCACCUUCUCCACACCUUCAUCCAAGUCGGCGGCGGCGGCGAGUUCAAAGUUCGAAGCUGCAAGCGCGGUGGUUCCCUGAGCCAGAGAAGGUGUGUUUCGAUUUGGGAAGAAGAAGGCCUUGCUGUCCAGUGAGCAGGCAACCAUAAAAAGGGCUAGCAGAGGUGCUGUAAAAGAAAACCAAGAACCUACAAGAACCAUAAAAGAGAUGAUUUGUAUUGUUUUUGGAACCUCGAUACACCUACAAGAACCUUAGUUGCAUCUAAGUUAUGUAAUUAUUGCUAUGUACUUGAAGAACUCCAUUAUAUCUAAGUUGGACAUUUAUGUAAUAGCUAUUUGAGCUGAUGGACAACUGCUAUUUGUAUCAGAAUACUGCUAUUGUGAUACUGGUACUUGAAGGCUACUUGAUGGAUGAACAAUAGUUAUGAAUAGUUUAAUAUUGUGUUAUGCAUGUGUGUAACUUACUAAAAAUGAUAAUCUGUGUUGCAAAA
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
1
NEP:
0.2%
LE_num:
LEP:
46.95%
ME_num:
MEP:
7.32%
HE_num:
HEP:
45.53%
Type:
HCR (High-Capacity ncRNA)
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
root_meristematic_zone
Tau :
0.78
Avg Expression:
28.55
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
| Num. | Condition | log2(FoldChange) | Padj |
|---|---|---|---|
| 1 | Caidao // leaf // none (control)--/--Caidao // leaf // 0.5% Na2CO3 solution for 36h | 9.39327383075326 | 1.54073490241606e-09 |
| 2 | WD20342 // leaf // none (control)--/--WD20342 // leaf // 0.5% Na2CO3 solution for 36h | 7.73044392901179 | 3.41459507250016e-07 |