Chr:
Chr7
Start:
3555894
End:
3561076
Strand:
+
Ref_name:
LOC107281792
Sequence
(XR_001547795.2):
UGUGUUAAAGUUCUAAUCAAUAUAGUAGAUAGUAAAUACUGCAGCCUAAUCUACUCUCUUGUUUUCUCCAAAUUAAUAAGGACAUACAGCUGUAGCAUGAUGGUCUUCCAGGAAAUUAUCGUGUCUUUUCAGCAAAGAUUUCAUUGUUCGAGGAAUGCAUAAUGCUGGACAGAGCUCUUGAGGAGAUGCAGAAAAAGGAUAGCAAAAUUGUUGACAAGCUAUCAUUCAAAGAACAAAUGGCCUACGUUUUGUUGAAAGUUGGCCGCUUUGAGGAGGCUGAGAAAACAUAUAGGUCCAUGCUUUUUAUGAAUCCUGAUAACUACAAGUGUUUCAUAGCUAUUCAAAAGUGCCUUGGUCUAUACUCAGAGAAUGGUCAGUAUUCCACUGAUGAUGUUGACCGAUUAUGCACAUUUUAUAGCUCACUUAAAAAAGAAUAUGGUUGGUCAUCUGUUGUUAAGGUAAACUACCUCAAAUUGUUUUUAUUUUUUCUUUGUUCCUUCAUGUUAAAUUGUUGGGUUCUCCGGGCACACAACAGUAUCUUGAUAUAUGUGGUAUUUAUUCGUUCUAUAUUGCAACACUAAUAACUAAUUUGCUGAAUCCCAAGUUGUCUAUCCAUAUAUAUGGUGAGUGGGGCAUGCACUGUAGAAGCUGUGAAUCUAAAAUUGUCUCUAAUUGCAACAACGCAUACCCCUUGAUUUCCUGGAAGAAGAGAAAUUUCAGGAGGCAGCAGAUAAUUAUGUCAGAACCCUAUUAACCAAGGUAAAUUCAGCCACUCUUAGGAGGUACUUUUAGUUUCUAUUUACGGUGUCUCAUUUUUGGUUAUAUAGGUAUGAAAAAUAAACAUUAUGUAGGGCAAUCUGUAUAGCAAAGAUAGUAGUACUGUUAGAUACUGUAAAUAAAUGAAACAAGACAAGGCAAUAACGCUUGAAUGAUUGUUCAGUUAUAAUUCAUUGAGAGGAAUUUCUUCCAAGUGAAAAAUAAGAUUAUCAUUAUUUUUUUAGAGCAGUAGCUACCAAACAGUUAUGGUUUAAAUUAUAUAAUUUAGUAUUAUUUUAUCAUUUUCCAUUCUUUACAUGUUUCAUACUGUGAACAAUUAGUACUUUUUUUUGUUCAACAACUUCAAUCUAUGAUCAAUUUUAAGAACAUAUAAACUCAUACUGAAUUAUGUGCUAUAUUUGUUAUAUAUUAUACAAUUGCAAUACGUAAUAUUAUUGAUGUGAAAUCUAAGGUAUAAAACUUGUCAAUUGUUUUUCUUGUCAUUUUAAAUUCAUGUACUUGCCUCAUAAAAUUUGUAUAAAUAUUGGGGUUUUAUUUUUAAAGAGCAAAUUAGAGCAGAGUUCAGAGUAUGCUCAUGUUGCUUGCUGUUGGGUAUACCUCCCAGGGGAUGGGAUGCUCUUAUCCGUCCUCAACAAAAUUCGUGGUGGCUGGCCGGCCUUUUCAUUCUACUCAGAAACGUUGUUACUGUGGUGCUACAGCUGCGACUGCUUACCUUGCUCUGUUAGCUUUUUUUGGAUUGCUAAUUUCAAAUGCGAAAUUGGUUAUUAGUGUUUCUUGUUUAUACAGCACAUGAAUCAGUAUGUAGAAUCAUACUUUACACUGCCAUUUUCUCCAAAGAGGGUGUGAUAAGCACUUCUGCAUCCAUUUGAACUCAUAUAUACUUGUGUGCCCUUUAGUUUUGCAGGAUAAUUAUAUGAAAGAAGGAAUUAAAAUGAGAAUUUUCUUCAACAGUUCAGUGUUCCUCAUAGAACAUCGAGUUCGACGCUCCUCUAUGUCUGGAGUUACGUAGCACAUUUUUACUAGCAGAAAUGGUGAACAUGGAGUAGUACCACGUUACAUUGAGAGUCAUCUUAAUCUACCAGAGGAUACCAUUAGGUAUAUCUCUCUCCAUCGCACUCUAAAAUAUAUUUAUCAGGUAUAUCCCUCUCCAUCGCACUCUCUGGAAUAUAUUUUGGCUUAUUUACAUAAUCCUAUCAUGCUCUCUUUCACAGUAAUAUAUUUCUAGAAAAUGUUGAUUUGGGUAAUAUUUGUUCGUCGAUGACAACCAUUUCAUGUCCAUAAUGAAUGGUUUAUUAUGUUUUCAACAUGACAAAGCCAUAUGUAUGCUUCAUAGUUUGAGACUGCUGUGUGACAGAAAUUUAUGUAUGCCCGCAAGAGUAGUUUGUGGAGAGCGCCUUGUAUGAUUUUCGAAAUAUCACCAAGCAACGAGCUUAUGGUUGGAUUUUCUUCGGAAGCUUCUUUUGUGCUUCGACUGCUAUGCCUGUACAAAGUUCACAGAUAAUAAACUAGAAAUAAAAUAACCUGGUCCCUCAGAUGAUUUAUCUAUGUUUUGUGCUCAUCAAAGGAAAGCAGGACCUGACCCUCCUGACCAAGUUCAAGUUGUGACAUAAGGUUUGCAAGAGUAGAGUGAAUCUCCUCGUAGCAAAUUUUCAUCAGUUUAUCUCAUUAUUGUGUAAAACUCUGAUUUUAUUUUACAUAUACAUCAGUGCAUUUAUCGUGUAAAACUCUGAUUUUAUUUUUUAUAUGCAUCAGUGUGCAUAAUCUUUAGGAUUGUAAAUUUGUAAUGGUGGGUGAGAGCUUUGUUCUCAUCAGAAUCUUUAGCACCAUUUCUAUUAAAUUACUCAUCAAUGGGUAACCUGUGUAUGCUGUUCGAUUCAUGUGCCUACAACUUUGCUCAAGAAAGAAUAGUCCUUUCUUGGUUGUCUUAGACAAUCACUGAUUUAGUCUGAAAGCAAAUAAUUUAACCU
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
1
NEP:
0.2%
LE_num:
LEP:
92.48%
ME_num:
MEP:
7.32%
HE_num:
HEP:
0.0%
Type:
MCR ()
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
anther
Tau :
0.95
Avg Expression:
4.29
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
Num. | Condition | log2(FoldChange) | Padj |
---|---|---|---|
1 | IR64 // panicle // Dawn--/--IR64 // panicle // Dawn + 14h | 2.27158703600938 | 0.0246763975639487 |
2 | IR64 // panicle // Dawn--/--IR64 // panicle // Dawn + 10.5h | 2.26092300074491 | 0.0320320451291628 |