Chr:
Chr7
Start:
14681499
End:
14682736
Strand:
+
Ref_name:
LOC107281703
Sequence
(XR_001547465.2):
AUUUCUUUACUUGAGAAAACUAUGAGUAUUUGUUAUUAUACCGUAGGCUACCAUAUUCAACCAUUCCUCCCAUACUCCAUCACUCCGUUUUUUUCGGAUCUACAACAAACUCAAUCAAAAUUCCAGCGAUGGCGAAUUGGCGAAUUGGCGAUUGGCUUCGGGAGAAAGCGAUGUAGGUCUCCAUCGUAGGCAAUUUUAGGGUUCGGGCUUGGUGACAGUGUCCAUGGCAGCGGGCGAUCGAAAGAGAGGAUGGGGGCCGCACGAAUUCGUUGCAUGCGCGCCGGAUCUGGCAGCGGGGCAUGAAUUAGGGCGUUACCUGGGGAGGAAGUGGGCGGCAGCUGAGGUCGCCGUGCUUCGUCGACCUUGGCACGGCAUCGGUCUUUGGCAUCCUCAGGAAAAAAAACAGGGCAAGCUACUGUUGAUCUGCAAUCAGUGUGGGCCAUGACACCGUUCAGCAAGAUGGACACCAACCUAAGGUGCCAGAGCUAUCCUGCCGCUCGCCGCAAUGGUAUCUCUCAUUUCCACAGGUUCCUCAUAUUGUUCACCAUGUAGCUCUGGAGAAAUCUCUUAUAUCUGCUGAUCAUGUUUUUUCUCUAGACACAUCUUGAUUGGUAUAAGUAUUCAUGUUAAUCCUAAGUAACUUGACCAUAGAAGAAAUAAUCUGCAGCUGUGGUUGGUAUUCACACUCCACUAUGAUUGAUGGUUUGGGUGUUGCUGGUUUGGGAGUUGGUGACAUUGAAGCAACCACUGACUGCACAAACACAUCAAAUAUACGUAUAAGUUUUAUGAGUCUAUUAGUAUGUUCUUUAGAUUUUUUUUUAACUACAGUCUUGUAUCUGACAUUCUGAAUUGCUGACGAAUACGUGUAUGAAA
Sequence
(XR_003243347.1):
AUUUCUUUACUUGAGAAAACUAUGAGUAUUUGUUAUUAUACCGUAGGCUACCAUAUUCAACCAUUCCUCCCAUACUCCAUCACUCCGUUUUUUUCGGAUCUACAACAAACUCAAUCAAAAUUCCAGCGAUGGCGAAUUGGCGAAUUGGCGAUUGGCUUCGGGAGAAAGCGAUGUAGGUCUCCAUCGUAGGCAAUUUUAGGGUUCGGGCUUGGUGACAGUGUCCAUGGCAGCGGGCGAUCGAAAGAGAGGAUGGGGGCCGCACGAAUUCGUUGCAUGCGCGCCGGAUCUGGCAGCGGGGCAUGAAUUAGGGCGUUACCUGGGGAGGAAGUGGGCGGCAGCUGAGGUCGCCGUGCUUCGUCGACCUUGGCACGGCAUCGGUCUUUGGCAUCCUCAGGAAAAAAAACAGGUUUGCAUAUUGAUGGUCCACCCUUAAUUUGCUACAUAAUUGCCUUACAUUUGUUCGUUGGUCUUGCUGUAUAUUGCCGGCAUCCAAAGUCAGCCAAGGGCUUCCUCAAGCUGAGCCCAACCCCAAAGGUUUGUGUUGUUUCUCUGAACAGGGCAAGCUACUGUUGAUCUGCAAUCAGUGUGGGCCAUGACACCGUUCAGCAAGAUGGACACCAACCUAAGGUGCCAGAGCUAUCCUGCCGCUCGCCGCAAUGGUAUCUCUCAUUUCCACAGGUUCCUCAUAUUGUUCACCAUGUAGCUCUGGAGAAAUCUCUUAUAUCUGCUGAUCAUGUUUUUUCUCUAGACACAUCUUGAUUGGUAUAAGUAUUCAUGUUAAUCCUAAGUAACUUGACCAUAGAAGAAAUAAUCUGCAGCUGUGGUUGGUAUUCACACUCCACUAUGAUUGAUGGUUUGGGUGUUGCUGGUUUGGGAGUUGGUGACAUUGAAGCAACCACUGACUGCACAAACACAUCAAAUAUACGUAUAAGUUUUAUGAGUCUAUUAGUAUGUUCUUUAGAUUUUUUUUUAACUACAGUCUUGUAUCUGACAUUCUGAAUUGCUGACGAAUACGUGUAUGAAA
Sequence
(XR_003243348.1):
CUACAUAACACCCUAACGUGCUAUGUACCUUCGUAGCACACCUCACAGCCCCAGCCCACCUCCUCCUUCUACUUGCAUGUCAGUAAUUUUUUUACCCGGUGAAUGCCGCACCCUCCCACAACCAACCGUGUCAAGCGAUGGCGAAUUGGCGAAUUGGCGAUUGGCUUCGGGAGAAAGCGAUGUAGGUCUCCAUCGUAGGCAAUUUUAGGGUUCGGGCUUGGUGACAGUGUCCAUGGCAGCGGGCGAUCGAAAGAGAGGAUGGGGGCCGCACGAAUUCGUUGCAUGCGCGCCGGAUCUGGCAGCGGGGCAUGAAUUAGGGCGUUACCUGGGGAGGAAGUGGGCGGCAGCUGAGGUCGCCGUGCUUCGUCGACCUUGGCACGGCAUCGGUCUUUGGCAUCCUCAGGAAAAAAAACAGGUUUGCAUAUUGAUGGUCCACCCUUAAUUUGCUACAUAAUUGCCUUACAUUUGUUCGUUGGUCUUGCUGUAUAUUGCCGGCAUCCAAAGUCAGCCAAGGGCUUCCUCAAGCUGAGCCCAACCCCAAAGGUUUGUGUUGUUUCUCUGAACAGGGCAAGCUACUGUUGAUCUGCAAUCAGUGUGGGCCAUGACACCGUUCAGCAAGAUGGACACCAACCUAAGGUGCCAGAGCUAUCCUGCCGCUCGCCGCAAUGGUAUCUCUCAUUUCCACAGGUUCCUCAUAUUGUUCACCAUGUAGCUCUGGAGAAAUCUCUUAUAUCUGCUGAUCAUGUUUUUUCUCUAGACACAUCUUGAUUGGUAUAAGUAUUCAUGUUAAUCCUAAGUAACUUGACCAUAGAAGAAAUAAUCUGCAGCUGUGGUUGGUAUUCACACUCCACUAUGAUUGAUGGUUUGGGUGUUGCUGGUUUGGGAGUUGGUGACAUUGAAGCAACCACUGACUGCACAAACACAUCAAAUAUACGUAUAAGUUUUAUGAGUCUAUUAGUAUGUUCUUUAGAUUUUUUUUUAACUACAGUCUUGUAUCUGACAUUCUGAAUUGCUGACGAAUACGUGUAUGAAA
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
1
NEP:
0.2%
LE_num:
LEP:
57.11%
ME_num:
MEP:
39.02%
HE_num:
HEP:
3.66%
Type:
HCR (High-Capacity ncRNA)
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
anther
Tau :
0.93
Avg Expression:
14.08
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
| Num. | Condition | log2(FoldChange) | Padj |
|---|---|---|---|
| 1 | Amaroo // embryo // dry seed 0 h--/--Amaroo // coleoptile // 3dN | 3.30286249370331 | 0.0122270903586457 |
| 2 | Amaroo // embryo // dry seed 0 h--/--Amaroo // coleoptile // 4dN | 3.74103176833884 | 0.00441416304468858 |
| 3 | Nipponbare // root // "mock,14_days"--/--Nipponbare // root // "auxin(50CM_2,4_D),14_days" | 2.36539082630609 | 2.34226922238777e-05 |
| 4 | Nipponbare // root // "mock,7_days"--/--Nipponbare // root // "auxin(50CM_2,4_D),7_days" | 1.91792321223711 | 0.0301021789932173 |
| 5 | BR-IRGA_409 // spikelet // control condition (29C) for 7 hrs--/--BR-IRGA_409 // spikelet // high temperature treatment (38C) for 7 hrs | 1.32507640947203 | 0.00155844806291858 |