Chr:
Chr7
Start:
23472438
End:
23475271
Strand:
-
Ref_name:
LOC107281534
Sequence
(XR_001547377.2):
UUUUUUUACGGACGAAAAUUUCUAGCCAUCUAGGUCAAGCCGUCAACUCCCGUGUCGUCUCCCUUCCUUCCGAGUUCGCCCACACCUUACGCCGCCGAUCUAUCUCGCAAGCAGGCCGCGACGCCGGCCGUCGUCCCGCCGCGCCAUAUCCAUCCUGAUUGGUCUAACUGUUUGCACAUUUUUGAUGCCUCGAGUUUGUGAUCGGACGGUGCUCUCGGGAGGUAGAGUCACCGCCGAGCUGUCAUGCCUUUCUUGCUUCGGUGGGGGAUGCUAUCUUCACCGAGUAAGAUCAUGGGGGCUUCUUACUUGUGUAGUGGCAUCUGGGAUUGUACUUCGUAAAAUCACUUUGUCAUCACAUUAACUUUUAUCACUUAGUGCUUGAUACUAUCAAUUCACCUAAUGCACGACCUGACCGAAGGGAUUACGACAGGUUACGUCUACCCAUUUUGAUUUUUGACGAAAUGAAUGACUUGUGAAAGAAUCUUAAAGCGUCAGCCUGUUUUAUUGGAUGGUAAACCUCUAGUAUUGUUUAUCUCCAUUUUUUUAAGGCUUCUGUCUUGUUAUUCGAUUAUAAACAUCUAAAAUAUUUGUUUCUCCAUUUUUUUUGGUUGUUGGCUUACUUGCUUGUCCGUAUA
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
1
NEP:
0.2%
LE_num:
LEP:
62.8%
ME_num:
MEP:
30.08%
HE_num:
HEP:
6.91%
Type:
HCR (High-Capacity ncRNA)
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
2nd_leaf
Tau :
0.93
Avg Expression:
6.51
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
Num. | Condition | log2(FoldChange) | Padj |
---|---|---|---|
1 | Nipponbare // shoot // No_DIS;Fr13_inoculated--/--Nipponbare // shoot // Drought_during_3_days;Fr13_inoculated | -2.00014743551885 | 1.61510881914182e-07 |
2 | Nipponbare // shoot // No_DIS;_mock_inoculated--/--Nipponbare // shoot // No_DIS;Fr13_inoculated | 1.43539566703091 | 0.0168887952328714 |