OSA-LNC107281323


Function Link


Basic Info

Chr:

Chr6

Start:

11649161

End:

11651829

Strand:

+

Ref_name:

LOC107281323

Sequence
(XR_001546617.2):

UUUUUCACACCAUGCUCUCCACUCCGCGGCUUCUCCCCGCACCGCGCGCCGGCGAUGCCAUACCCGCGCCCGCUCCCUCCGCCGCUGCACUCCGCACCCGCGCCGCACGCCGUCCUCCCAACGCCGUGCGCCAGCGCUGUCCUCCCCGCGCCCUCUCCGCCGCUGCCCUUCCAGCACCACCCCGCUGGCUCUCCCUCGCCGCCUCGCGCCGUUGCCGGAUCCUGUCAGGGCACCGUCGAUACAUCAUCGUCUGGUCUCCGUCGAGCCGCUUCGCCCUUGUGUCUGCACCGCACCUCACCGUCGAUCCCACGCAGUCCGGCCACCGUCGAUCCCUCGCCGUCCGGUCUCCGUCGACCCGCAUCAGCCUAGCACCGGCACCGGAUCUCCUGCUGUCCGGUCGCCGUCGAUCCCUCGAUGUCUGGUGUCCACUGCGCCGCCAACGCGACUCCUUGCUUCCCCCUUCGCAAACUCAUCUUGAUCACAUCUCCCUCGCUGCUCCUGUCUAAGACAAAGGUGAAUUUAUGUUGAGUUCCAGCCGGACAAUUGUUUGGCCUGCAGUAUGAAGCUUGUGGAGCAGUAAGUCUGCCAGCGGUAGGAGCAGGGUCUCAUUGAGUUGCUCCCGGCCAGGACUGCGAGGCUGUUGAUUCAUUGUUCGUGUCAUGCUGAGAUAAAGGCUUCUAUCUAAUUUUGGUUCAUAUAUCUGACCCUACUUGCCAAAUUCAGUUCCAGAGCAACAUGCAACUCCCAGUAAAAGUAAAACCAAAAGGAGCAAUGCUGAUUGGAAAUAUAUUUCUAUCGGGGCGAUACUGAUGAGAUACAUUUUCUUAGAGCAAUUUGGAAAUGAUUUGAUCAUAAUAAUGCUGAUUGCAAAGGUGUACGAAGUCUAAUUUAUUCAUAACAUGCUCAGUAUCUUAUCACACUGCAAUUCAACAGUUGCAUUUUGUAUUUUGCUUAACGAAGAAUAAAUAAUCUUUAUGAUACAGGUUCCACUUAACUUUAUUGCAACCCUUUUGCUUUUGGCUGGAUAGAUGUUGACCUGUUAGCGGCAGCAGAUAUUUGUUCAAUCUGAUCUCUGAUUAUUUUUUUUCUAGAGCUGUGCCCAAGAAAUAUGAACAGACCAUAUAACAGUUACAUAGCAGCUAUAUGUGACUCGGUUUUUUUGCUCCAGUGAUAAUGGAUUAAUGACAACAACUUCUGCUGUCAACUUUGUGUUUUUGCCUGACCAUAUUGUGAUGUUUGCAUUGAUUUGCAUGUUCAAUCUGUGAAGCUUAUCUGGGAUAAACAAAGUGGACAACUUCAGGGUUAUGACUUUGUUGAGUUUACAAGCGUUGCAGGCAGCUGCUGAUGAAGUUCUUCAUCAGACAUAUAGUGGACACUGCACAAAUGAUGCUGAAUGUUGAGAUGGUCUUUCAAUUGAAUUGGGCCAUUUUAGUUGGGAUCUGGCUGCAGAUAUUGCAGACUACAUACUACAAGAGGCAUUCAGGGUCCAUUACCUUUCAGUUAAGGGUGUGUUAAUAGGUUUAUGGAAUUGUGAAAUUUGUUGGUGAUCUUGUAGCAGAAGUUCGUGCAAUAACUGAAAUGAAUACAAUGUAUUGGCCCAGCAGCAAAUAAGAGAACAACUGGGUUCAGGAGAGAGGUAAA

Sequence
(XR_003242802.1):

UUUUUCACACCAUGCUCUCCACUCCGCGGCUUCUCCCCGCACCGCGCGCCGGCGAUGCCAUACCCGCGCCCGCUCCCUCCGCCGCUGCACUCCGCACCCGCGCCGCACGCCGUCCUCCCAACGCCGUGCGCCAGCGCUGUCCUCCCCGCGCCCUCUCCGCCGCUGCCCUUCCAGCACCACCCCGCUGGCUCUCCCUCGCCGCCUCGCGCCGUUGCCGGAUCCUGUCAGGGCACCGUCGAUACAUCAUCGUCUGGUCUCCGUCGAGCCGCUUCGCCCUUGUGUCUGCACCGCACCUCACCGUCGAUCCCACGCAGUCCGGCCACCGUCGAUCCCUCGCCGUCCGGUCUCCGUCGACCCGCAUCAGCCUAGCACCGGCACCGGAUCUCCUGCUGUCCGGUCGCCGUCGAUCCCUCGAUGUCUGGUGUCCACUGCGCCGCCAACGCGACUCCUUGCUUCCCCCUUCGCAAACUCAUCUUGAUCACAUCUCCCUCGCUGCUCCUGUCUAAGACAAAGGUGAAUUUAUGUUGAGUUCCAGCCGGACAAUUGUUUGGCCUGCAGUAUGAAGCUUGUGGAGCAGUAAGUCUGCCAGCGGUAGGAGCAGGGUCUCAUUGAGUUGCUCCCGGCCAGGACUGCGAGGCUGUUGAUUCAUUGUUCGUGUCAUGCUGAGAUAAAGGCUUCUAUCUAAUUUUGGUUCAUAUAUCUGACCCUACUUGCCAAAUUCAGUUCCAGAGCAACAUGCAACUCCCAGUAAAAGUAAAACCAAAAGGUAUUUAGGUCAAUCGUCUCCUCGCCUCAGCCUACCACCCUAUUUUGAGCUUAAAGAUUGAAUUUCAAUCCAUGUGACAUUGGCUUCAAGGUAAACAUGAUUUUAUUUUUAAGAUUGCAUUUUAGUUUGCAAUAGGCAUACAUAUUCUAACUAUAUUUUUUACUUUUAGUUCAUGCAUGCUUCUUACAGCUCAAUUUAUGUAUAAUCCAUAUUUUUUAGGUUUCUGCAAACACAUGAUUAUAUUAUCGUUAUAAUUAAACUUUGGAUGUGAUUAUAUACUUUUUCACGGCAUGUAUCUCAAUUAAUUUUGAUAGGAGCAAUGCUGAUUGGAAAUAUAUUUCUAUCGGGGCGAUACUGAUGAGAUACAUUUUCUUAGAGCAAUUUGGAAAUGAUUUGAUCAUAAUAAUGCUGAUUGCAAAGGUGUACGAAGUCUAAUUUAUUCAUAACAUGCUCAGUAUCUUAUCACACUGCAAUUCAACAGUUGCAUUUUGUAUUUUGCUUAACGAAGAAUAAAUAAUCUUUAUGAUACAGGUUCCACUUAACUUUAUUGCAACCCUUUUGCUUUUGGCUGGAUAGAUGUUGACCUGUUAGCGGCAGCAGAUAUUUGUUCAAUCUGAUCUCUGAUUAUUUUUUUUCUAGAGCUGUGCCCAAGAAAUAUGAACAGACCAUAUAACAGUUACAUAGCAGCUAUAUGUGACUCGGUUUUUUUGCUCCAGUGAUAAUGGAUUAAUGACAACAACUUCUGCUGUCAACUUUGUGUUUUUGCCUGACCAUAUUGUGAUGUUUGCAUUGAUUUGCAUGUUCAAUCUGUGAAGCUUAUCUGGGAUAAACAAAGUGGACAACUUCAGGGUUAUGACUUUGUUGAGUUUACAAGCGUUGCAGGCAGCUGCUGAUGAAGUUCUUCAUCAGACAUAUAGUGGACACUGCACAAAUGAUGCUGAAUGUUGAGAUGGUCUUUCAAUUGAAUUGGGCCAUUUUAGUUGGGAUCUGGCUGCAGAUAUUGCAGACUACAUACUACAAGAGGCAUUCAGGGUCCAUUACCUUUCAGUUAAGGGUGUGUUAAUAGGUUUAUGGAAUUGUGAAAUUUGUUGGUGAUCUUGUAGCAGAAGUUCGUGCAAUAACUGAAAUGAAUACAAUGUAUUGGCCCAGCAGCAAAUAAGAGAACAACUGGGUUCAGGAGAGAGGUAAA

Sequence
(XR_003242803.1):

UUUUUCACACCAUGCUCUCCACUCCGCGGCUUCUCCCCGCACCGCGCGCCGGCGAUGCCAUACCCGCGCCCGCUCCCUCCGCCGCUGCACUCCGCACCCGCGCCGCACGCCGUCCUCCCAACGCCGUGCGCCAGCGCUGUCCUCCCCGCGCCCUCUCCGCCGCUGCCCUUCCAGCACCACCCCGCUGGCUCUCCCUCGCCGCCUCGCGCCGUUGCCGGAUCCUGUCAGGGCACCGUCGAUACAUCAUCGUCUGGUCUCCGUCGAGCCGCUUCGCCCUUGUGUCUGCACCGCACCUCACCGUCGAUCCCACGCAGUCCGGCCACCGUCGAUCCCUCGCCGUCCGGUCUCCGUCGACCCGCAUCAGCCUAGCACCGGCACCGGAUCUCCUGCUGUCCGGUCGCCGUCGAUCCCUCGAUGUCUGGUGUCCACUGCGCCGCCAACGCGACUCCUUGCUUCCCCCUUCGCAAACUCAUCUUGAUCACAUCUCCCUCGCUGCUCCUGUCUAAGACAAAGGUGAAUUUAUGUUGAGUUCCAGCCGGACAAUUGUUUGGCCUGCAGUAUGAAGCUUGUGGAGCAGUAAGUCUGCCAGCGGUAGGAGCAGGGUCUCAUUGAGUUGCUCCCGGCCAGGACUGCGAGGCUGUUGAUUCAUUGUUCGUGUCAUGCUGAGAUAAAGGCUUCUAUCUAAUUUUGGUUCAUAUAUCUGACCCUACUUGCCAAAUUCAGUUCCAGAGCAACAUGCAACUCCCAGUAAAAGUAAAACCAAAAGGUAUUUAGGUCAAUCGUCUCCUCGCCUCAGCCUACCACCCUAUUUUGAGCUUAAAGAUUGAAUUUCAAUCCAUGUGACAUUGGCUUCAAGGUAAACAUGAUUUUAUUUUUAAGAUUGCAUUUUAGUUUGCAAUAGGCAUACAUAUUCUAACUAUAUUUUUUACUUUUAGUUCAUGCAUGCUUCUUACAGCUCAAUUUAUGUAUAAUCCAUAUUUUUUAGGUUUCUGCAAACACAUGAUUAUAUUAUCGUUAUAAUUAAACUUUGGAUGUGAUUAUAUACUUUUUCACGGCAUGUAUCUCAAUUAAUUUUGAUAGGAGCAAUGCUGAUUGGAAAUAUAUUUCUAUCGGGGCGAUACUGAUGAGAUACAUUUUCUUAGAGCAAUUUGGAAAUGAUUUGAUCAUAAUAAUGCUGAUUGCAAAGGUUCCACUUAACUUUAUUGCAACCCUUUUGCUUUUGGCUGGAUAGAUGUUGACCUGUUAGCGGCAGCAGAUAUUUGUUCAAUCUGAUCUCUGAUUAUUUUUUUUCUAGAGCUGUGCCCAAGAAAUAUGAACAGACCAUAUAACAGUUACAUAGCAGCUAUAUGUGACUCGGUUUUUUUGCUCCAGUGAUAAUGGAUUAAUGACAACAACUUCUGCUGUCAACUUUGUGUUUUUGCCUGACCAUAUUGUGAUGUUUGCAUUGAUUUGCAUGUUCAAUCUGUGAAGCUUAUCUGGGAUAAACAAAGUGGACAACUUCAGGGUUAUGACUUUGUUGAGUUUACAAGCGUUGCAGGCAGCUGCUGAUGAAGUUCUUCAUCAGACAUAUAGUGGACACUGCACAAAUGAUGCUGAAUGUUGAGAUGGUCUUUCAAUUGAAUUGGGCCAUUUUAGUUGGGAUCUGGCUGCAGAUAUUGCAGACUACAUACUACAAGAGGCAUUCAGGGUCCAUUACCUUUCAGUUAAGGGUGUGUUAAUAGGUUUAUGGAAUUGUGAAAUUUGUUGGUGAUCUUGUAGCAGAAGUUCGUGCAAUAACUGAAAUGAAUACAAUGUAUUGGCCCAGCAGCAAAUAAGAGAACAACUGGGUUCAGGAGAGAGGUAAA

Sequence
(XR_003242804.1):

UUUUUCACACCAUGCUCUCCACUCCGCGGCUUCUCCCCGCACCGCGCGCCGGCGAUGCCAUACCCGCGCCCGCUCCCUCCGCCGCUGCACUCCGCACCCGCGCCGCACGCCGUCCUCCCAACGCCGUGCGCCAGCGCUGUCCUCCCCGCGCCCUCUCCGCCGCUGCCCUUCCAGCACCACCCCGCUGGCUCUCCCUCGCCGCCUCGCGCCGUUGCCGGAUCCUGUCAGGGCACCGUCGAUACAUCAUCGUCUGGUCUCCGUCGAGCCGCUUCGCCCUUGUGUCUGCACCGCACCUCACCGUCGAUCCCACGCAGUCCGGCCACCGUCGAUCCCUCGCCGUCCGGUCUCCGUCGACCCGCAUCAGCCUAGCACCGGCACCGGAUCUCCUGCUGUCCGGUCGCCGUCGAUCCCUCGAUGUCUGGUGUCCACUGCGCCGCCAACGCGACUCCUUGCUUCCCCCUUCGCAAACUCAUCUUGAUCACAUCUCCCUCGCUGCUCCUGUCUAAGACAAAGGUGAAUUUAUGUUGAGUUCCAGCCGGACAAUUGUUUGGCCUGCAGUAUGAAGCUUGUGGAGCAGUAAGUCUGCCAGCGGUAGGAGCAGGGUCUCAUUGAGUUGCUCCCGGCCAGGACUGCGAGGCUGUUGAUUCAUUGUUCGUGUCAUGCUGAGAUAAAGGCUUCUAUCUAAUUUUGGUACAUUCUCACAUAUUAUACCAUGGAAUCAAAAUAUACCAAGUUCCAGAGCAACAUGCAACUCCCAGUAAAAGUAAAACCAAAAGGUAUUUAGGUCAAUCGUCUCCUCGCCUCAGCCUACCACCCUAUUUUGAGCUUAAAGAUUGAAUUUCAAUCCAUGUGACAUUGGCUUCAAGGUAAACAUGAUUUUAUUUUUAAGAUUGCAUUUUAGUUUGCAAUAGGCAUACAUAUUCUAACUAUAUUUUUUACUUUUAGUUCAUGCAUGCUUCUUACAGCUCAAUUUAUGUAUAAUCCAUAUUUUUUAGGUUUCUGCAAACACAUGAUUAUAUUAUCGUUAUAAUUAAACUUUGGAUGUGAUUAUAUACUUUUUCACGGCAUGUAUCUCAAUUAAUUUUGAUAGGAGCAAUGCUGAUUGGAAAUAUAUUUCUAUCGGGGCGAUACUGAUGAGAUACAUUUUCUUAGAGCAAUUUGGAAAUGAUUUGAUCAUAAUAAUGCUGAUUGCAAAGGUGUACGAAGUCUAAUUUAUUCAUAACAUGCUCAGUAUCUUAUCACACUGCAAUUCAACAGUUGCAUUUUGUAUUUUGCUUAACGAAGAAUAAAUAAUCUUUAUGAUACAGGUUCCACUUAACUUUAUUGCAACCCUUUUGCUUUUGGCUGGAUAGAUGUUGACCUGUUAGCGGCAGCAGAUAUUUGUUCAAUCUGAUCUCUGAUUAUUUUUUUUCUAGAGCUGUGCCCAAGAAAUAUGAACAGACCAUAUAACAGUUACAUAGCAGCUAUAUGUGACUCGGUUUUUUUGCUCCAGUGAUAAUGGAUUAAUGACAACAACUUCUGCUGUCAACUUUGUGUUUUUGCCUGACCAUAUUGUGAUGUUUGCAUUGAUUUGCAUGUUCAAUCUGUGAAGCUUAUCUGGGAUAAACAAAGUGGACAACUUCAGGGUUAUGACUUUGUUGAGUUUACAAGCGUUGCAGGCAGCUGCUGAUGAAGUUCUUCAUCAGACAUAUAGUGGACACUGCACAAAUGAUGCUGAAUGUUGAGAUGGUCUUUCAAUUGAAUUGGGCCAUUUUAGUUGGGAUCUGGCUGCAGAUAUUGCAGACUACAUACUACAAGAGGCAUUCAGGGUCCAUUACCUUUCAGUUAAGGGUGUGUUAAUAGGUUUAUGGAAUUGUGAAAUUUGUUGGUGAUCUUGUAGCAGAAGUUCGUGCAAUAACUGAAAUGAAUACAAUGUAUUGGCCCAGCAGCAAAUAAGAGAACAACUGGGUUCAGGAGAGAGGUAAA


Expression Capacity

HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.

HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.


NE_num:

1

NEP:

0.2%

LE_num:

355

LEP:

72.15%

ME_num:

134

MEP:

27.24%

HE_num:

2

HEP:

0.41%

Type:

HCR (High-Capacity ncRNA)


Tissue Specific Expression

cutoff: tau > 0.9 and Average expression in the tissue > 10


Tissue :

flower

Tau :

0.80

Avg Expression:

4.05

Tip: OSA-LNC107281323 is not a tissue-specific expression ncRNA.

Differential Expression

cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01


Num. Condition log2(FoldChange) Padj
1BR-IRGA_409 // spikelet // control condition (29C) for 7 hrs--/--BR-IRGA_409 // spikelet // high temperature treatment (38C) for 7 hrs1.12881054565160.0151352711783733
2Vialone_Nano // root // control--/--Vialone_Nano // root // 100 mM NaCl2.337085034380360.039551368219228