Chr:
Chr6
Start:
11649161
End:
11651829
Strand:
+
Ref_name:
LOC107281323
Sequence
(XR_001546617.2):
UUUUUCACACCAUGCUCUCCACUCCGCGGCUUCUCCCCGCACCGCGCGCCGGCGAUGCCAUACCCGCGCCCGCUCCCUCCGCCGCUGCACUCCGCACCCGCGCCGCACGCCGUCCUCCCAACGCCGUGCGCCAGCGCUGUCCUCCCCGCGCCCUCUCCGCCGCUGCCCUUCCAGCACCACCCCGCUGGCUCUCCCUCGCCGCCUCGCGCCGUUGCCGGAUCCUGUCAGGGCACCGUCGAUACAUCAUCGUCUGGUCUCCGUCGAGCCGCUUCGCCCUUGUGUCUGCACCGCACCUCACCGUCGAUCCCACGCAGUCCGGCCACCGUCGAUCCCUCGCCGUCCGGUCUCCGUCGACCCGCAUCAGCCUAGCACCGGCACCGGAUCUCCUGCUGUCCGGUCGCCGUCGAUCCCUCGAUGUCUGGUGUCCACUGCGCCGCCAACGCGACUCCUUGCUUCCCCCUUCGCAAACUCAUCUUGAUCACAUCUCCCUCGCUGCUCCUGUCUAAGACAAAGGUGAAUUUAUGUUGAGUUCCAGCCGGACAAUUGUUUGGCCUGCAGUAUGAAGCUUGUGGAGCAGUAAGUCUGCCAGCGGUAGGAGCAGGGUCUCAUUGAGUUGCUCCCGGCCAGGACUGCGAGGCUGUUGAUUCAUUGUUCGUGUCAUGCUGAGAUAAAGGCUUCUAUCUAAUUUUGGUUCAUAUAUCUGACCCUACUUGCCAAAUUCAGUUCCAGAGCAACAUGCAACUCCCAGUAAAAGUAAAACCAAAAGGAGCAAUGCUGAUUGGAAAUAUAUUUCUAUCGGGGCGAUACUGAUGAGAUACAUUUUCUUAGAGCAAUUUGGAAAUGAUUUGAUCAUAAUAAUGCUGAUUGCAAAGGUGUACGAAGUCUAAUUUAUUCAUAACAUGCUCAGUAUCUUAUCACACUGCAAUUCAACAGUUGCAUUUUGUAUUUUGCUUAACGAAGAAUAAAUAAUCUUUAUGAUACAGGUUCCACUUAACUUUAUUGCAACCCUUUUGCUUUUGGCUGGAUAGAUGUUGACCUGUUAGCGGCAGCAGAUAUUUGUUCAAUCUGAUCUCUGAUUAUUUUUUUUCUAGAGCUGUGCCCAAGAAAUAUGAACAGACCAUAUAACAGUUACAUAGCAGCUAUAUGUGACUCGGUUUUUUUGCUCCAGUGAUAAUGGAUUAAUGACAACAACUUCUGCUGUCAACUUUGUGUUUUUGCCUGACCAUAUUGUGAUGUUUGCAUUGAUUUGCAUGUUCAAUCUGUGAAGCUUAUCUGGGAUAAACAAAGUGGACAACUUCAGGGUUAUGACUUUGUUGAGUUUACAAGCGUUGCAGGCAGCUGCUGAUGAAGUUCUUCAUCAGACAUAUAGUGGACACUGCACAAAUGAUGCUGAAUGUUGAGAUGGUCUUUCAAUUGAAUUGGGCCAUUUUAGUUGGGAUCUGGCUGCAGAUAUUGCAGACUACAUACUACAAGAGGCAUUCAGGGUCCAUUACCUUUCAGUUAAGGGUGUGUUAAUAGGUUUAUGGAAUUGUGAAAUUUGUUGGUGAUCUUGUAGCAGAAGUUCGUGCAAUAACUGAAAUGAAUACAAUGUAUUGGCCCAGCAGCAAAUAAGAGAACAACUGGGUUCAGGAGAGAGGUAAA
Sequence
(XR_003242802.1):
UUUUUCACACCAUGCUCUCCACUCCGCGGCUUCUCCCCGCACCGCGCGCCGGCGAUGCCAUACCCGCGCCCGCUCCCUCCGCCGCUGCACUCCGCACCCGCGCCGCACGCCGUCCUCCCAACGCCGUGCGCCAGCGCUGUCCUCCCCGCGCCCUCUCCGCCGCUGCCCUUCCAGCACCACCCCGCUGGCUCUCCCUCGCCGCCUCGCGCCGUUGCCGGAUCCUGUCAGGGCACCGUCGAUACAUCAUCGUCUGGUCUCCGUCGAGCCGCUUCGCCCUUGUGUCUGCACCGCACCUCACCGUCGAUCCCACGCAGUCCGGCCACCGUCGAUCCCUCGCCGUCCGGUCUCCGUCGACCCGCAUCAGCCUAGCACCGGCACCGGAUCUCCUGCUGUCCGGUCGCCGUCGAUCCCUCGAUGUCUGGUGUCCACUGCGCCGCCAACGCGACUCCUUGCUUCCCCCUUCGCAAACUCAUCUUGAUCACAUCUCCCUCGCUGCUCCUGUCUAAGACAAAGGUGAAUUUAUGUUGAGUUCCAGCCGGACAAUUGUUUGGCCUGCAGUAUGAAGCUUGUGGAGCAGUAAGUCUGCCAGCGGUAGGAGCAGGGUCUCAUUGAGUUGCUCCCGGCCAGGACUGCGAGGCUGUUGAUUCAUUGUUCGUGUCAUGCUGAGAUAAAGGCUUCUAUCUAAUUUUGGUUCAUAUAUCUGACCCUACUUGCCAAAUUCAGUUCCAGAGCAACAUGCAACUCCCAGUAAAAGUAAAACCAAAAGGUAUUUAGGUCAAUCGUCUCCUCGCCUCAGCCUACCACCCUAUUUUGAGCUUAAAGAUUGAAUUUCAAUCCAUGUGACAUUGGCUUCAAGGUAAACAUGAUUUUAUUUUUAAGAUUGCAUUUUAGUUUGCAAUAGGCAUACAUAUUCUAACUAUAUUUUUUACUUUUAGUUCAUGCAUGCUUCUUACAGCUCAAUUUAUGUAUAAUCCAUAUUUUUUAGGUUUCUGCAAACACAUGAUUAUAUUAUCGUUAUAAUUAAACUUUGGAUGUGAUUAUAUACUUUUUCACGGCAUGUAUCUCAAUUAAUUUUGAUAGGAGCAAUGCUGAUUGGAAAUAUAUUUCUAUCGGGGCGAUACUGAUGAGAUACAUUUUCUUAGAGCAAUUUGGAAAUGAUUUGAUCAUAAUAAUGCUGAUUGCAAAGGUGUACGAAGUCUAAUUUAUUCAUAACAUGCUCAGUAUCUUAUCACACUGCAAUUCAACAGUUGCAUUUUGUAUUUUGCUUAACGAAGAAUAAAUAAUCUUUAUGAUACAGGUUCCACUUAACUUUAUUGCAACCCUUUUGCUUUUGGCUGGAUAGAUGUUGACCUGUUAGCGGCAGCAGAUAUUUGUUCAAUCUGAUCUCUGAUUAUUUUUUUUCUAGAGCUGUGCCCAAGAAAUAUGAACAGACCAUAUAACAGUUACAUAGCAGCUAUAUGUGACUCGGUUUUUUUGCUCCAGUGAUAAUGGAUUAAUGACAACAACUUCUGCUGUCAACUUUGUGUUUUUGCCUGACCAUAUUGUGAUGUUUGCAUUGAUUUGCAUGUUCAAUCUGUGAAGCUUAUCUGGGAUAAACAAAGUGGACAACUUCAGGGUUAUGACUUUGUUGAGUUUACAAGCGUUGCAGGCAGCUGCUGAUGAAGUUCUUCAUCAGACAUAUAGUGGACACUGCACAAAUGAUGCUGAAUGUUGAGAUGGUCUUUCAAUUGAAUUGGGCCAUUUUAGUUGGGAUCUGGCUGCAGAUAUUGCAGACUACAUACUACAAGAGGCAUUCAGGGUCCAUUACCUUUCAGUUAAGGGUGUGUUAAUAGGUUUAUGGAAUUGUGAAAUUUGUUGGUGAUCUUGUAGCAGAAGUUCGUGCAAUAACUGAAAUGAAUACAAUGUAUUGGCCCAGCAGCAAAUAAGAGAACAACUGGGUUCAGGAGAGAGGUAAA
Sequence
(XR_003242803.1):
UUUUUCACACCAUGCUCUCCACUCCGCGGCUUCUCCCCGCACCGCGCGCCGGCGAUGCCAUACCCGCGCCCGCUCCCUCCGCCGCUGCACUCCGCACCCGCGCCGCACGCCGUCCUCCCAACGCCGUGCGCCAGCGCUGUCCUCCCCGCGCCCUCUCCGCCGCUGCCCUUCCAGCACCACCCCGCUGGCUCUCCCUCGCCGCCUCGCGCCGUUGCCGGAUCCUGUCAGGGCACCGUCGAUACAUCAUCGUCUGGUCUCCGUCGAGCCGCUUCGCCCUUGUGUCUGCACCGCACCUCACCGUCGAUCCCACGCAGUCCGGCCACCGUCGAUCCCUCGCCGUCCGGUCUCCGUCGACCCGCAUCAGCCUAGCACCGGCACCGGAUCUCCUGCUGUCCGGUCGCCGUCGAUCCCUCGAUGUCUGGUGUCCACUGCGCCGCCAACGCGACUCCUUGCUUCCCCCUUCGCAAACUCAUCUUGAUCACAUCUCCCUCGCUGCUCCUGUCUAAGACAAAGGUGAAUUUAUGUUGAGUUCCAGCCGGACAAUUGUUUGGCCUGCAGUAUGAAGCUUGUGGAGCAGUAAGUCUGCCAGCGGUAGGAGCAGGGUCUCAUUGAGUUGCUCCCGGCCAGGACUGCGAGGCUGUUGAUUCAUUGUUCGUGUCAUGCUGAGAUAAAGGCUUCUAUCUAAUUUUGGUUCAUAUAUCUGACCCUACUUGCCAAAUUCAGUUCCAGAGCAACAUGCAACUCCCAGUAAAAGUAAAACCAAAAGGUAUUUAGGUCAAUCGUCUCCUCGCCUCAGCCUACCACCCUAUUUUGAGCUUAAAGAUUGAAUUUCAAUCCAUGUGACAUUGGCUUCAAGGUAAACAUGAUUUUAUUUUUAAGAUUGCAUUUUAGUUUGCAAUAGGCAUACAUAUUCUAACUAUAUUUUUUACUUUUAGUUCAUGCAUGCUUCUUACAGCUCAAUUUAUGUAUAAUCCAUAUUUUUUAGGUUUCUGCAAACACAUGAUUAUAUUAUCGUUAUAAUUAAACUUUGGAUGUGAUUAUAUACUUUUUCACGGCAUGUAUCUCAAUUAAUUUUGAUAGGAGCAAUGCUGAUUGGAAAUAUAUUUCUAUCGGGGCGAUACUGAUGAGAUACAUUUUCUUAGAGCAAUUUGGAAAUGAUUUGAUCAUAAUAAUGCUGAUUGCAAAGGUUCCACUUAACUUUAUUGCAACCCUUUUGCUUUUGGCUGGAUAGAUGUUGACCUGUUAGCGGCAGCAGAUAUUUGUUCAAUCUGAUCUCUGAUUAUUUUUUUUCUAGAGCUGUGCCCAAGAAAUAUGAACAGACCAUAUAACAGUUACAUAGCAGCUAUAUGUGACUCGGUUUUUUUGCUCCAGUGAUAAUGGAUUAAUGACAACAACUUCUGCUGUCAACUUUGUGUUUUUGCCUGACCAUAUUGUGAUGUUUGCAUUGAUUUGCAUGUUCAAUCUGUGAAGCUUAUCUGGGAUAAACAAAGUGGACAACUUCAGGGUUAUGACUUUGUUGAGUUUACAAGCGUUGCAGGCAGCUGCUGAUGAAGUUCUUCAUCAGACAUAUAGUGGACACUGCACAAAUGAUGCUGAAUGUUGAGAUGGUCUUUCAAUUGAAUUGGGCCAUUUUAGUUGGGAUCUGGCUGCAGAUAUUGCAGACUACAUACUACAAGAGGCAUUCAGGGUCCAUUACCUUUCAGUUAAGGGUGUGUUAAUAGGUUUAUGGAAUUGUGAAAUUUGUUGGUGAUCUUGUAGCAGAAGUUCGUGCAAUAACUGAAAUGAAUACAAUGUAUUGGCCCAGCAGCAAAUAAGAGAACAACUGGGUUCAGGAGAGAGGUAAA
Sequence
(XR_003242804.1):
UUUUUCACACCAUGCUCUCCACUCCGCGGCUUCUCCCCGCACCGCGCGCCGGCGAUGCCAUACCCGCGCCCGCUCCCUCCGCCGCUGCACUCCGCACCCGCGCCGCACGCCGUCCUCCCAACGCCGUGCGCCAGCGCUGUCCUCCCCGCGCCCUCUCCGCCGCUGCCCUUCCAGCACCACCCCGCUGGCUCUCCCUCGCCGCCUCGCGCCGUUGCCGGAUCCUGUCAGGGCACCGUCGAUACAUCAUCGUCUGGUCUCCGUCGAGCCGCUUCGCCCUUGUGUCUGCACCGCACCUCACCGUCGAUCCCACGCAGUCCGGCCACCGUCGAUCCCUCGCCGUCCGGUCUCCGUCGACCCGCAUCAGCCUAGCACCGGCACCGGAUCUCCUGCUGUCCGGUCGCCGUCGAUCCCUCGAUGUCUGGUGUCCACUGCGCCGCCAACGCGACUCCUUGCUUCCCCCUUCGCAAACUCAUCUUGAUCACAUCUCCCUCGCUGCUCCUGUCUAAGACAAAGGUGAAUUUAUGUUGAGUUCCAGCCGGACAAUUGUUUGGCCUGCAGUAUGAAGCUUGUGGAGCAGUAAGUCUGCCAGCGGUAGGAGCAGGGUCUCAUUGAGUUGCUCCCGGCCAGGACUGCGAGGCUGUUGAUUCAUUGUUCGUGUCAUGCUGAGAUAAAGGCUUCUAUCUAAUUUUGGUACAUUCUCACAUAUUAUACCAUGGAAUCAAAAUAUACCAAGUUCCAGAGCAACAUGCAACUCCCAGUAAAAGUAAAACCAAAAGGUAUUUAGGUCAAUCGUCUCCUCGCCUCAGCCUACCACCCUAUUUUGAGCUUAAAGAUUGAAUUUCAAUCCAUGUGACAUUGGCUUCAAGGUAAACAUGAUUUUAUUUUUAAGAUUGCAUUUUAGUUUGCAAUAGGCAUACAUAUUCUAACUAUAUUUUUUACUUUUAGUUCAUGCAUGCUUCUUACAGCUCAAUUUAUGUAUAAUCCAUAUUUUUUAGGUUUCUGCAAACACAUGAUUAUAUUAUCGUUAUAAUUAAACUUUGGAUGUGAUUAUAUACUUUUUCACGGCAUGUAUCUCAAUUAAUUUUGAUAGGAGCAAUGCUGAUUGGAAAUAUAUUUCUAUCGGGGCGAUACUGAUGAGAUACAUUUUCUUAGAGCAAUUUGGAAAUGAUUUGAUCAUAAUAAUGCUGAUUGCAAAGGUGUACGAAGUCUAAUUUAUUCAUAACAUGCUCAGUAUCUUAUCACACUGCAAUUCAACAGUUGCAUUUUGUAUUUUGCUUAACGAAGAAUAAAUAAUCUUUAUGAUACAGGUUCCACUUAACUUUAUUGCAACCCUUUUGCUUUUGGCUGGAUAGAUGUUGACCUGUUAGCGGCAGCAGAUAUUUGUUCAAUCUGAUCUCUGAUUAUUUUUUUUCUAGAGCUGUGCCCAAGAAAUAUGAACAGACCAUAUAACAGUUACAUAGCAGCUAUAUGUGACUCGGUUUUUUUGCUCCAGUGAUAAUGGAUUAAUGACAACAACUUCUGCUGUCAACUUUGUGUUUUUGCCUGACCAUAUUGUGAUGUUUGCAUUGAUUUGCAUGUUCAAUCUGUGAAGCUUAUCUGGGAUAAACAAAGUGGACAACUUCAGGGUUAUGACUUUGUUGAGUUUACAAGCGUUGCAGGCAGCUGCUGAUGAAGUUCUUCAUCAGACAUAUAGUGGACACUGCACAAAUGAUGCUGAAUGUUGAGAUGGUCUUUCAAUUGAAUUGGGCCAUUUUAGUUGGGAUCUGGCUGCAGAUAUUGCAGACUACAUACUACAAGAGGCAUUCAGGGUCCAUUACCUUUCAGUUAAGGGUGUGUUAAUAGGUUUAUGGAAUUGUGAAAUUUGUUGGUGAUCUUGUAGCAGAAGUUCGUGCAAUAACUGAAAUGAAUACAAUGUAUUGGCCCAGCAGCAAAUAAGAGAACAACUGGGUUCAGGAGAGAGGUAAA
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
1
NEP:
0.2%
LE_num:
LEP:
72.15%
ME_num:
MEP:
27.24%
HE_num:
HEP:
0.41%
Type:
HCR (High-Capacity ncRNA)
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
flower
Tau :
0.80
Avg Expression:
4.05
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
Num. | Condition | log2(FoldChange) | Padj |
---|---|---|---|
1 | BR-IRGA_409 // spikelet // control condition (29C) for 7 hrs--/--BR-IRGA_409 // spikelet // high temperature treatment (38C) for 7 hrs | 1.1288105456516 | 0.0151352711783733 |
2 | Vialone_Nano // root // control--/--Vialone_Nano // root // 100 mM NaCl | 2.33708503438036 | 0.039551368219228 |