Chr:
Chr6
Start:
30141439
End:
30151800
Strand:
+
Ref_name:
LOC107281220
Sequence
(XR_001546574.2):
ACUGGAGGGACCUCAUUGCAAUUUGCCAGCCUCGUCGUCUCCAAAGUCCAAAAGCCCAUGGGCUCCGCUCCCUCAUCGGCGAGGCGCCGCCGCCGCCGCCGCAGCGGCGCUCCUCGACGGCACGCGCCCUCCACCUCCGCCUCACCGGAUGGUUCGAGCGGUUCUUCAUAGAGGAUCCGACGGCGCCCUGCUCGUCGCGGCAGCAGCUGAGUGCCCUUACAGCCAUUGUGACAGUUUGUUGGCUUUGAUCCGGUACUGAUGUCUGUGGAGAGAGUGAGCGAGGGAUUUGAUCCAUUUUUGAAGAGUUUGCUUGCCGGAAAUUAUACCUUGCUGAUGUUUCAAUCAGGCGCACACAAGGAUCGUUUCAGAUGAAAACGGCUGCCGAUAUAUGCACUGCAAAUAAUUCAGGGACUGUGACCAACUGUAUGCUUCAAAGUUCAAACUAUGGAAAGUGAAGACAUGGUCCGCUCAUUCUGGGGGCCGCAGCUACAGAUGUUUUCGCCGUGCGCACGUGUGCAUGAACUUGUUCCCUUGGAGUUACAUCACGCAUUCAUGCUGGCGCAGCUGUUGAUUGACUCUGUGUUUUGUGGAGUCGAAACAUUGAUAGCCUGAUUGAUGUGGUCUCGCGGAACAUUGCACAUGCAUCAAUGAAUCGCGGUUUGUGACACGCUGUUCAUCAAGCAAUGUGUGUGGGAACGCGGGUGCUUCAAAUUCUCUGAACCACAAAAUCUUCACUGUGAGGAUCGGAGUACAUUGCAUUCUGAAAUGAUUUGAUGCCAGCACUGGAGGAGACUCCACUCCGGCUGUAUCCUCUUGAUCUAUCUAGAGAAGACUAGCUGAACUAGGGGAUGAUGCACUGCAACCUACUGCCAAAUAUUUUAUACGCUUGGAGCAUAUCUUUCAGUGAUCACAAGAAGCUACGGAGUCUACCCUGUUCAUCUGCUGGCCCAUUGGAGGCAGGGGUUGCUACAAAUGGAAUCAACGGGGCCGAUAAAGAACUAGACAAGAUGAUGGAUUUGUGCAUGCUCCCCUAAAAUAUAAGGGUCAAUAAAGGAUUAAGCUAAUAUUUUUUUCCAUUCGGCAUAAGAGGAAUUCAACGAAAAAAACAUUAGUCAAUAUUGGAGGGGAGAAUAAUUAAAUCUGAGAAAAGAAAAGGUUUUAGACACCACUAUAUAUAUAUACCCCACUUUAAG
Sequence
(XR_001546575.2):
ACUGGAGGGACCUCAUUGCAAUUUGCCAGCCUCGUCGUCUCCAAAGUCCAAAAGCCCAUGGGCUCCGCUCCCUCAUCGGCGAGGCGCCGCCGCCGCCGCCGCAGCGGCGCUCCUCGACGGCACGCGCCCUCCACCUCCGCCUCACCGGAUGGUUCGAGCGGUUCUUCAUAGAGGAUCCGACGGCGCCCUGCUCGUCGCGGCAGCAGCUGAGUGCCCUUACAGCCAUUGUGACAGUUUGUUGGCUUUGAUCCGGUACUGAUGUCUGUGGAGAGAGUGAGCGAGGGAUUUGAUCCAUUUUUGAAGAGUUUGCUUGCCGGAAAUUAUACCUUGCUGAUGUUUCAAUCAGGCGCACACAAGGAUCGUUUCAGAUGAAAACGGCUGCCGAUAUAUGCACUGCAAAUAAUUCAGGGACUGUGACCAACUGUAUGCUUCAAAGUUCAAACUAUGGAAAGUGAAGACAUGGUCCGCUCAUUCUGGGGGCCGCAGCUACAGAUGUUUUCGCCGUGCGCACGUGUGCAUGAACUUGUUCCCUUGGAGUUACAUCACGCAUUCAUGCUGGCGCAGCUGUUGAUUGACUCUGUGUUUUGUGGAGUCGAAACAUUGAUAGCCUGAUUGAUGUGGUCUCGCGGAACAUUGCACAUGCAUCAAUGAAUCGCGGUUUGUGACACGCUGUUCAUCAAGCAAUGUGUGUGGGAACGCGGGUGCUUCAAAUUCUCUGAACCACAAAAUCUUCACUGUGAGGAUCGGAGUACAUUGCAUUCUGAAAUGAUUUGAUGCCAGCACUGGAGGAGACUCCACUCCGGCUGUAUCCUCUUGAUCUAUCUAGAGAAGACUAGCUGAACUAGGGGAUGAUGCACUGCAACCUACUGCCAAAUAUUUUAUACGCUUGGAGCAUAUCUUUCAGUGAUCACAAGAAGCUACGGAGUCUACCCUGUUCAUCUGCUGGCCCAUUGGAGGCAGGGGUUGCUACAAAUGGAAUCAACGGGGCCGAUAAAGAACUAGACAAAUAAAAAAUUAACCAUGCAUGUUCCAUACAUCCCUCCACAGGAGUAGUACGUGCAGUACACUAGCUGGAGACUGGAAAUGAUCGACUUGAGUUGAGUCGGUCAUCACAGUCCACCGUGUGCAUAUAUAGACGAUGCAUCAUGAGGUAUGCACACUGUCUAAGUGUCUAUACACCAACAGUACUUGAUACAUAGGGACCCACUAGGUAGAGACCAGAGAACCUAAGCUAAUCAUGCUACACCUCUCUCGAUAGCAAGCUGCUAGCUAGCUUAACCAGCAAAAGUGGCUAUAUGCAGUGGCCUUGUCUGCAUGGAUCGAUGCUCUUGCUCUUGCCUCUUGGUUUUGAUCAUGUAGGAUCAAUAUAUGCAGGCAGGCAGCUGCAGGAACAGGUAUAGUAGUGUACUACAAGUGUGGAAGCCCAUGCAUGUUUGAUGUUUUGCUAUAGCUUUGUAGUCAACUAUAGUCAUAUAUAUGGCUUCUUCUCUUCACUGGUGGAGAAACCAUCUUUCGUCGGUCGGCCGAUUUCCACAAUAGUCCCGGAUGCAAUAAAAACCGGGGCUAAAGAUGAUCUUUA
Sequence
(XR_001546576.2):
ACUGGAGGGACCUCAUUGCAAUUUGCCAGCCUCGUCGUCUCCAAAGUCCAAAAGCCCAUGGGCUCCGCUCCCUCAUCGGCGAGGCGCCGCCGCCGCCGCCGCAGCGGCGCUCCUCGACGGCACGCGCCCUCCACCUCCGCCUCACCGGAUGGUUCGAGCGGUUCUUCAUAGAGGAUCCGACGGCGCCCUGCUCGUCGCGGCAGCAGCUGAGUGCCCUUACAGCCAUUGUGACAGUUUGUUGGCUUUGAUCCGGUACUGAUGUCUGUGGAGAGAGUGAGCGAGGGAUUUGAUCCAUUUUUGAAGAGUUUGCUUGCCGGAAAUUAUACCUUGCUGAUGUUUCAAUCAGGCGCACACAAGGAUCGUUUCAGAUGAAAACGGCUGCCGAUAUAUGCACUGCAAAUAAUUCAGGGACUGUGACCAACUGUAUGCUUCAAAGUUCAAACUAUGGAAAGUGAAGACAUGGUCCGCUCAUUCUGGGGGCCGCAGCUACAGAUGUUUUCGCCGUGCGCACGUGUGCAUGAACUUGUUCCCUUGGAGUUACAUCACGCAUUCAUGCUGGCGCAGCUGUUGAUUGACUCUGUGUUUUGUGGAGUCGAAACAUUGAUAGCCUGAUUGAUGUGGUCUCGCGGAACAUUGCACAUGCAUCAAUGAAUCGCGGUUUGUGACACGCUGUUCAUCAAGCAAUGUGUGUGGGAACGCGGGUGCUUCAAAUUCUCUGAACCACAAAAUCUUCACUGUGAGGAUCGGAGUACAUUGCAUUCUGAAAUGAUUUGAUGCCAGCACUGGAGGAGACUCCACUCCGGCUGUAUCCUCUUGAUCUAUCUAGAGAAGACUAGCUGAACUAGGGGAUGAUGCACUGCAACCUACUGCCAAAUAUUUUAUACGCUUGGAGCAUAUCUUUCAGUGAUCACAAGAAGCUACGGAGUCUACCCUGUUCAUCUGCUGGCCCAUUGGAGGCAGGGGUUGCUACAAAUGGAAUCAACGGGGCCGAUAAAGAACUAGACAAAUGGAUCGGCAAUGGAUGUACGCUGACCGGCGGUCCAAAGAGUUUAUUGACGGCGUGC
Sequence
(XR_003242987.1):
ACUGGAGGGACCUCAUUGCAAUUUGCCAGCCUCGUCGUCUCCAAAGUCCAAAAGCCCAUGGGCUCCGCUCCCUCAUCGGCGAGGCGCCGCCGCCGCCGCCGCAGCGGCGCUCCUCGACGGCACGCGCCCUCCACCUCCGCCUCACCGGAUGGUUCGAGCGGUUCUUCAUAGAGGAUCCGACGGCGCCCUGCUCGUCGCGGCAGCAGCUGAGUGCCCUUACAGCCAUUGUGACAGUUUGUUGGCUUUGAUCCGGUACUGAUGUCUGUGGAGAGAGUGAGCGAGGGAUUUGAUCCAUUUUUGAAGAGUUUGCUUGCCGGAAAUUAUACCUUGCUGAUGUUUCAAUCAGGCGCACACAAGGAUCGUUUCAGAUGAAAACGGCUGCCGAUAUAUGCACUGCAAAUAAUUCAGGGACUGUGACCAACUGUAUGCUUCAAAGUUCAAACUAUGGAAAGUGAAGACAUGGUCCGCUCAUUCUGGGGGCCGCAGCUACAGAUGUUUUCGCCGUGCGCACGUGUGCAUGAACUUGUUCCCUUGGAGUUACAUCACGCAUUCAUGCUGGCGCAGCUGUUGAUUGACUCUGUGUUUUGUGGAGUCGAAACAUUGAUAGCCUGAUUGAUGUGGUCUCGCGGAACAUUGCACAUGCAUCAAUGAAUCGCGGUUUGUGACACGCUGUUCAUCAAGCAAUGUGUGUGGGAACGCGGGUGCUUCAAAUUCUCUGAACCACAAAAUCUUCACUGUGAGGAUCGGAGUACAUUGCAUUCUGAAAUGAUUUGAUGCCAGCACUGGAGGAGACUCCACUCCGGCUGUAUCCUCUUGAUCUAUCUAGAGAAGACUAGCUGAACUAGGGGAUGAUGCACUGCAACCUACUGCCAAAUAUUUUAUACGCUUGGAGCAUAUCUUUCAGUGAUCACAAGAAGCUACGGAGUCUACCCUGUUCAUCUGCUGGCCCAUUGGAGGCAGGGGUUGCUACAAAUGGAAUCAACGGGGCCGAUAAAGAACUAGACAAGUGAGUUUUUCCUCAUCCAUUAUCUUUUGCCGAUUGGUAUGUGCAUAUUUAAAUCACUUCAUUAUAUACAUACGACUAUAUAUGAUGCUGCACCAGGUACAAAAAUUCACUAUCCUUUUCCCCUUAAUAUAUAAUACCAUCUAAUUAUUUUGUUAUGCAUGUUUCUUCUACUUCUUGAUGAAAUGAAUAAUUCUUUUUUGUUAUGUAUGAAUUUUGUUGCAUUUAUUUAUUUGUUGGGCAUAUGGGCUAUAGUGAAACGUAUACUAGCUAGUAGAGAUGUACUCCUUCCGUCCCAAAAAAAGGCAAACCUUAGGUUUCCGUGUCCAACUUUAACUGUCCGUCUUAUGUGAAUUUUUUUUAUAAUUCGUAUUUUCAUUGUUAUUAGAUGAUAAAACA
Sequence
(XR_003242988.1):
AGAUGCUGCUUCCCCACGCAAAAAAUGCAAAUACAGGUAACUGGAGGGACCUCAUUGCAAUUUGCCAGCCUCGUCGUCUCCAAAGUCCAAAAGCCCAUGGGCUCCGCUCCCUCAUCGGCGAGGCGCCGCCGCCGCCGCCGCAGCGGCGCUCCUCGACGGCACGCGCCCUCCACCUCCGCCUCACCGGAUGGUUCGAGCGGUUCUUCAUAGAGGAUCCGACGGCGCCCUGCUCGUCGCGGCAGCAGCUGAGUGCCCUUACAGCCAUUGUGACAGUUUGUUGGCUUUGAUCCGGUACUGAUGUCUGUGGAGAGAGUGAGCGAGGGAUUUGAUCCAUUUUUGAAGAGUUUGCUUGCCGGAAAUUAUACCUUGCUGAUGUUUCAAUCAGGCGCACACAAGGAUCGUUUCAGGUCUGUUGCAAUUCUGAACUGCUUAUGCUUUUGCUUGAUCUCUGAACUUCUCAAUUAGGCAUGGUACUAUUUACUAAAUCUAAUUCAUUUUACUAGCUUUCUCAAGACGAUGUAGUUGUCACUUUUCAGUAGUAACACAUGGAGACACACGAUGGAUUGAUGGAUUUAGUAUUGCCACCACGAGUUGCAUUUAUCCAUAUGAUUUGAUUGCUGAACGAUUUGCGUGUUACCACCAUGAGGGCACAUGUCCGUAUGAUUUGAUUACUAAACCACAUGGAGAUUUUGACAUUGUAACCGUCGGAGACAUGCAUCAACAGAUUAUGUAUUGUGAUAUUCCGUGUCUGGUUUCAAGCAGGGCCACGGCCUACAAACCAAUAGAAACCAGCUCUUAAUCAUAAGUACUAUCACUUGUAAAGUAAAACGUGCUUUAAGAAUCAUGAUAUCUCUAACAGGGCAAGCAAAUAAUUAGGUGUUCAGGAUUUCUACCAGACAAAUGAGUUAUGGAGUAUGAUGACCUCUCUAGUUGAUCAAAACUUAUUAACAUACUAGUUAGUCCGUUAAUCAUUGAUUUUCUUAAUCGUUGGUCUUAGAAAUUGAUUAAUUUUUACUUGUCUACUUGUCACAUAAGUGUACUGCAUAAACUAUUCUCUUUAUGUUGCUUAUUUUCCUGGUUCGAUCAUCAUAAAGUUGUCUCAUGGUUUGGUUCUGUUCAGCAAUCAAGAGUUUUACUGAACAAGGUCCAAUCAAGAGUUUGCUUCUUCUGCAUAUGUGUAGAAUGAAGGAUCCCUUUAAACAAUUAGUUUUUGAUUGGUUACAAUCUUUGUAAUUUUUUCCUUUACGGUUUUCAUGUCCUUUUGUAUGAUGUAAAUAUUAUUCUUUUAUAAAAGCUAUACUGUUGGGCAAAUGCCUGACAGUAAUUCCCAUAAAAAAAGGUCCAAUAAAUUUUUUUCAAGAUAGACAGAAACAUAAAAGAUGUACAUGUAUCUAAAUAGUCAAGAUGCAAGUCUUGAGAUGACUUUACAGCUGGCCACAAUGGAAUAGUUGGAUACGUAACGUGAAGUGAAGUUCACUAGGGAUAAGCUGGGUUUCCUUAUGAUUUAUGAAUCCCAAAAUGUGAUUUCUCUUGCUUCAAACAGCAUACUGGUUCAGCAUAUUAGGAAUGGGUAACCAAACCAGAAAUUUCCAAAAGAAUGAAAUCCCCGUCACUUGGUUUUAUCAUCAUUGAUCAUCCCUCCUUCAGGAAUUUGUCUAGUUCUCUAGCUUUUUAUUUGGAAGUAUGUGCGUCUAGUUCCUUCGCCAGAAAGCGCUACAAAUACACUUUGUACUAGGAGCUAAUGAUGCCAAUUUGUUCGAUGCACCAUUUAGACAGGAUGCAAACAUAUUACAUGUAGGUUCCUAUAUUUUUUUUAUCGGAAAUAUAGACUCCUAUAUUUGUUCCAUGAAGCAAAACGAAUGCAACCUGAUCAUGUAUUUUUUCCAGUUGAACGUGAGCAUGAUAUCAUGGUGUCAUAGCAUGUCUUCUUCCUUCAUUGAAAACUGUUUGGCUACUGUGCAUAUGUUGAGAUUUGGUACUUCUAUUGACCUUCUAAAAUAAAAGAAAUCUAUGUUAAGGACACUGUCAAGAUCAGUCUUUACACUAAAACCAGAUAUCUUGUGUUGAUAGUUAUUGUUCUUCAUGAAACUAGUAUCAUUAUAAUAUUGUCACAUCUUGUGUUUUCACUAGAAUUCUACUAGAAAUGUUCUAUAUUUUUAUUGUGCAUAUUGCACUAUAGAUGCCAAAACAACCUAGACAAUCCUGACAACAUAUCUGUGCUCUGUGUACCACAAACUUCAGAGUCUUGUACUGCUCUGGCACUUUCAUCGUUGCACAAAUAUUCCGAACUAGCUAAUUCCCUCAACUUCCUUUUAUUUGGUCACUUUCUUUUGAUUUUUUCCUGCUCACAGUACUCUUUCCAAUAUCAAUUCCAAGUUUUUAUUCUGGAUAUGUUCUGUGGCUAUGCUACACAUUUUGAACUUGGGAUGUUAAAGAUGUCGUCCUUUCAACCAACCUAGUCAGAACCAGCUCACAGCAUAUUUUUGGUCAGGGUGCGCAGGUGAUUGGUGUGCCCCCCUUCUUGGGUUCGUGUUGUUAUGAAAUAAGGCAGAGCUUCCGUCUUUGUUUUAAACUUUAAAAAAAGACGUUUCUUCCAAGAAAAAAAAAGAUGUAGUGACUGCUUGCCGACAGGGAAGAGAGAGAUGAAAACGGCUGCCGAUAUAUGCACUGCAAAUAAUUCAGGGACUGUGACCAACUGUAUGCUUCAAAGUUCAAACUAUGGAAAGUGAAGACAUGGUCCGCUCAUUCUGGGGGCCGCAGCUACAGAUGUUUUCGCCGUGCGCACGUGUGCAUGAACUUGUUCCCUUGGAGUUACAUCACGCAUUCAUGCUGGCGCAGCUGUUGAUUGACUCUGUGUUUUGUGGAGUCGAAACAUUGAUAGCCUGAUUGAUGUGGUCUCGCGGAACAUUGCACAUGCAUCAAUGAAUCGCGGUUUGUGACACGCUGUUCAUCAAGCAAUGUGUGUGGGAACGCGGGUGCUUCAAAUUCUCUGAACCACAAAAUCUUCACUGUGAGGAUCGGAGUACAUUGCAUUCUGAAAUGAUUUGAUGCCAGCACUGGAGGAGACUCCACUCCGGCUGUAUCCUCUUGAUCUAUCUAGAGAAGACUAGCUGAACUAGGGGAUGAUGCACUGCAACCUACUGCCAAAUAUUUUAUACGCUUGGAGCAUAUCUUUCAGUGAUCACAAGAAGCUACGGAGUCUACCCUGUUCAUCUGCUGGCCCAUUGGAGGCAGGGGUUGCUACAAAUGGAAUCAACGGGGCCGAUAAAGAACUAGACAAGUGAGUUUUUCCUCAUCCAUUAUCUUUUGCCGAUUGGUAUGUGCAUAUUUAAAUCACUUCAUUAUAUACAUACGACUAUAUAUGAUGCUGCACCAGGUACAAAAAUUCACUAUCCUUUUCCCCUUAAUAUAUAAUACCAUCUAAUUAUUUUGUUAUGCAUGUUUCUUCUACUUCUUGAUGAAAUGAAUAAUUCUUUUUUGUUAUGUAUGAAUUUUGUUGCAUUUAUUUAUUUGUUGGGCAUAUGGGCUAUAGUGAAACGUAUACUAGCUAGUAGAGAUGUACUCCUUCCGUCCCAAAAAAAGGCAAACCUUAGGUUUCCGUGUCCAACUUUAACUGUCCGUCUUAUGUGAAUUUUUUUUAUAAUUCGUAUUUUCAUUGUUAUUAGAUGAUAAAACA
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
1
NEP:
0.2%
LE_num:
LEP:
67.48%
ME_num:
MEP:
32.32%
HE_num:
HEP:
0.0%
Type:
MCR ()
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
embryo
Tau :
0.82
Avg Expression:
2.44
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
Num. | Condition | log2(FoldChange) | Padj |
---|---|---|---|
1 | Amaroo // embryo // dry seed 0 h--/--Amaroo // embryo // 24hN | 1.14100509011652 | 0.00022900803214939 |
2 | Amaroo // embryo // dry seed 0 h--/--Amaroo // embryo // 12hN | 1.06539605671264 | 0.000141067432899716 |
3 | Amaroo // embryo // dry seed 0 h--/--Amaroo // coleoptile // 3dN | 1.00877400740914 | 0.000264954351990408 |
4 | Amaroo // embryo // dry seed 0 h--/--Amaroo // embryo // 12hA | 1.15402440824315 | 1.099937680931e-05 |
5 | Amaroo // embryo // dry seed 0 h--/--Amaroo // coleoptile // 2dN | 1.00556430468249 | 0.000162883478019213 |
6 | Nipponbare // panicle // AM--/--Nipponbare // panicle // PM | 2.23944710373806 | 0.0083584436360259 |