Chr:
Chr4
Start:
16356223
End:
16356958
Strand:
-
Ref_name:
LOC107280728
Sequence
(XR_001545287.2):
CUCCUCCUCCUCCUCAACCUCGCUCUCUCUCUCCCCCUCCCCCCUCUCUCUCUCUGUCUCGCGGGAGAGGACACAAGAGCCAGUAGGCGAUGGCCCAGCAAUGGUGGUGGCCCCCUCCCCUCCGCUAGAUCCGGUGAGAGGGGAGGCACCGGCAGCCCGACGGGAAGGGAGGCGAUGGUUGCCAAGAAGGGAGGAAGAGAGGCGCAUUCACCGAGCGGUCUCCCCGUACGCCUCCGACUCGUUCUCCUCUCUCCAGCAGCCCGGCGGUGUUGCUGUCUCUUCCGCUAGAUCCGGCGGGAGGUGAGGUGGUGGCGACGGUUCGGCGGUGGCCUGGCAUUGGCGCCCUCCCCUCCUGGCGGCGGGGCUCUGCGGGACAACGUCGGCAGCAUCCGCAGCGACGGAGCAUCGGCGGCGGGGCCUCCCACUGCGGAUCCGACGUUAUCAGUAGUUAAUUUAAUCAUUUGUGUUCAUCUUGUGCAUGGUGUCAAUCCGUGUUCAUUUGUUCAUAUAUUAAUCUGUGUUCAUUUGUUCACCUUGUCCAUGGUGUCGAAGUAUCGACUCGAGCCGGGUUCCUUUUUUGUAGCUCGUGGAUUCCACUUUGGUGCCGGUUUUUAAAUGGGAUUGGUGCCGGUGCACUCAUCA
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
1
NEP:
0.2%
LE_num:
LEP:
92.28%
ME_num:
MEP:
4.88%
HE_num:
HEP:
2.64%
Type:
HCR (High-Capacity ncRNA)
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
anther
Tau :
0.95
Avg Expression:
12.67
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
| Num. | Condition | log2(FoldChange) | Padj |
|---|---|---|---|
| 1 | WD20342 // leaf // none (control)--/--WD20342 // leaf // 0.5% Na2CO3 solution for 36h | -6.98086780552785 | 0.00222261370669233 |
| 2 | Nipponbare // leaf // Non-inoculated--/--Nipponbare // leaf // Inoculated with Pyricularia oryzae | 1.87289783937352 | 0.0183769842841579 |