Chr:
Chr4
Start:
21957302
End:
21959696
Strand:
-
Ref_name:
LOC107280715
Sequence
(XR_001545271.2):
UAAUAUCUGGUCCUAUCUGUCAUACACACAUACACCUUAAAGUCAGUACUAUUUACAAAUCUAGCCCACUACUAUUUUCUCUUAUCUUUUAUCUCCUCGAAAUAUGUUUAUAGCUGGUUUAUAGCCUGCUAUUCUACCUGUUCCGAGGAGUCGAAAAAAAAUACACGAAUUACCCAUCCACGUAUCUACAGUUCUACACUGUUGCCGUUAUCCCCUUCUCUUCCAAAUUUCUCGCCCCCAAAACCCUCUCCUCUGCACAGCUCCUUGCCGCACGUGCCACGCGCCCGUGCAGAACUGCAGGACUUCCGCCAUGGAGCCCGUCGCCAAGCGGCCGUCCCGUGCGGGCGGAGGCGGGUCCGCCGCCGGCGAUCGGCUGAGCGCCCUGCCGGAUGGCCUCCUCCACGCCGUCAUGUCCUUCCUCCCCGCGCCCGGCAAGCCGUGCAGACCUGCGUGCUCUCCAAGAGGUGGGUACACCUCUGGCGCUCCAUGCCUUGCCUCAACCUCCAAACCCCGGGAGUUCCCGGGAUCCAUCGAGUAUUGGGGACCCAACGAGAAAUGGGGGAAAGUGCUGGAUUUCACCACCAACCUUCUGAUGUUUCACCAUAUGCUCCCUCUCUAGACGCGUUCCGGAUUGAUACAGGAAUGGAUCUGAUGAACCCUGGCCAUUUUCGGCAUGUCGAUCGAUGGAUCCGUGGUGGCAUGAAGUACUGUCCACAAGUGGUAGACAUCCAUGUUGGUAUCUGCCUCAAGUAUGAACUGCCCCAUCUAGGAUCCUCGAGCUCCUGUCGUCUCAAGAGGUUGCGCCUUCCUGAGAGCUGAGAACUUUUACGGUACAAUAUACUACCCAUAUAUACUGGCAGUAUAUAAAAGGGCAUAUUAGGAAUUUGAUAGAAAAAUAAAACAACACUUUAGUAAUUUUUGGUUCAAAUUGAAUCUAAUUGAGAGUACCUGAUCCUGGAUCUUAUCGUGCACUAGGGGAGGAGCAUACUGAGCGUCAUUUGAUGACAAAACACAUGACGAUAGCACGAUUUAACGAUAGUAUAACGAAGAAAAGACAAAAUUACCCUUUCAAAGUUUAUACUGCAAUCUAAUUAAAUAAAAAAUUAAAUCAAUCUACACCGUUAGAUCAUAUAUACUAGCAGUAUAUUGUACCGUAAAAAUCCUCUUCUUCUGUGGCUUUGGAUAGUCGUUUCGCGGAGCACCUACGCGCUGGCUGCCCUGUUCUGGAAUACCUGGAGCUCGCUUACUGCCGCACUGAGUUUAGCCACAUUCGAUCUGGCACGUUGAAGAACUUGGCUAUUGAAUAUUGCUCAUCUCGCUCCAUACAUAGCUUGGUUAUCAUUGCUCCUCGUCCCUGCGUCUACUCAUUCGGGUUAGGGAUGGUACUGUUUCAUUGUAUGGGGUGAAUUCCCUUGUGGAGGCAUCGAUUGAUGUAAGUAACUGUCAAAUGUCGCCAAGCGGCGAGGCCAUGCUUCUCGGUGCCCUGUUCAGUGCCACCAAUUUGGAGUUGAAGGGUACUCGGGCAAUGGCAAUACUGGAUGAGGAAUUGGAUAAAUUCCCAUUAUUCAACAACCUGAGAAACUUGUCACUACACUGUUGUCUUCGAGACAAAGGUAAUUUGAGUGACAGAUUCAAGGCUCUUGGAAGAUUACUACAAAAGUCUCUUAAUUUGGAGAAGCUUACUUUGCAGGAUUUCUGGUUUUUAGGGGGCUCUGAGACUGAGAGGGCAAAGCAAAAGACCAGUACCUGUGUGCCUCUCAAAAAUCAGGAUCAAGUGUCUUUCCAAUGUCAGAAGUUGAAGUUGAUUGAAAUCAAAUAUAACAAUGAACUUCGCUGUGAUCACCAACUGUUUCAACUUAUGUGGGCUUUCUGGAGAAACCUAAAGAAGACUAGGAUCGUUCUUACCAAAAUAUAGAGAAGCCCCUGGUAUGGUACUUUCACGAGUGAUUCUCUUCCCUAUACACUCCUGAAGUUUGGCAUAUGCAAUGCCAUUUUUGGUUCUGCUUGUUGAUGGAGUAGAACCAUCUAUUAUCAACUCUCUUCUAAAUGAUAUAUGUAUUUGCGCUAUUAAUAGAGGCAUAGCAGUGUGGUAAACUACUUUUUGUUGAACGUAGUAGCGGCAUAGAAGACAGUUGGAUGUAACAACAAACAAGUAACUGAUGAUUUCAAUUUAUGGAACCAGUAGUAUCAAGUAGCAA
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
1
NEP:
0.2%
LE_num:
LEP:
87.4%
ME_num:
MEP:
12.4%
HE_num:
HEP:
0.0%
Type:
MCR ()
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
shoot
Tau :
0.80
Avg Expression:
1.01
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
Num. | Condition | log2(FoldChange) | Padj |
---|---|---|---|
1 | Nipponbare // shoot // Drought_during_3_days;_mock_inoculated--/--Nipponbare // shoot // Drought_during_3_days;Fr13_inoculated | 2.63801558217653 | 0.0464763362391864 |