Chr:
Chr11
Start:
12392971
End:
12397780
Strand:
+
Ref_name:
LOC107279536
Sequence
(XR_001541571.2):
AAACAGGAUCUCGCCAUUCCUACCGUCGCACUACAAAUUCAGGAUGUUGCCAAGCCUCAGGUUGGAAUGAAUUGUAGCUGCCUCUGACUUCACUGAACCUUACGACAUGUGGUCAGGCCUUAAAUUUAACCAGCUCUUGUCUGAUGAUCGGAUGAAAUUGGCGUGUGCCUUGUUUUUUCUUGAUGGAUGGACUUAUCCCGUCCUGUAAUCAGAGGAUCAAAUGAUAAGUACAUAAAAGGAGGCACAAAUCACUUUUUUGUUCUCGAUUACGUAGGAGAUUUGCCCAUCAUUUUGUAGAGAGGAAGCAUAUAUAUCCUUUACUCAAUCAGGUGGAUCAGUGGCUCAUGUUAGUAACUGGAUUCUGAUGGACAAAUGAAAAGAUCAGUGGCUGGAUCAAUAACAAAAGCAGUAUAUUCCAAGAUGCAAAAAAGUUUUUCUUAUUUCUUGAAUUUUGUAUCCAUUUAAACCUUUUUAGGUCUUGAUACUGUUUGUUCUCAAUCCUUUUACACAUAAUUUGCAUGAAAAAAACAGUGACUGACUAUACUAAUUUCUAUCAGAAAGUGACGACUGUUGAGCUUGUUGCGUGCCAUACAUCAAAAUGGGAAAAUUGGGGGAAGCAGUAGACAAGUUGCUCUGCUGUGUAUUAAUGAACCAGUUAACAGUAGGCAUGAUGGAAAGAUUCGGGAAAUAUGACGAGAUGCUUGAACCGGGAUAGCCCUCUGCCAUGGGAUAAUUGGAACCUGUGCAGCUGUGCUACUGGUGAGCUCAGGAUAAGGCAUAUGCAGCUAUACGUACGUUGCGAGAUAAAGGCAGAGUCUUCAUCGAGCAUUGAUUCGCCUUUUCACUUGGUCACCCGUGGUGACUACUCUGCUGCCAUGACCCCCUAUCCGGCUAUCCACUAAACUCACUCACCAUGGGUGACAGAGACAUUCAGUAGUAGAUGAACAACACAAGAUAUGGGCCUUCCAGGUCAAUAAUCAUUGAGAACGACAGGUAAUUCAAUAAAAUCAUAUUGCAGUUCCGAUUCAGUGAAAUUUCAUUACACUUUCAUUUGUGUAGCAGUGUGUGUCAUUUUGAUUAAGGAUUUUGAGGCAAUGAGCCCAUAGAUCAUAAUAUACAUUCCCUAAUGCUGAUGGUGAUUUGCCCUGACAAAAAAUUGGAAACCCAGGUUUGUCACAACUUAGUUUGACCUGCCAUGCAGACUAUAGCUGAUACCUGGUUGCUCAUAUGCCGAACACAAUUCCAGUUGAUUUACUUCUUGACCAACACAUGUAUUUAGAUAUAAUUGAUGUGUAUAGCCAUUUGUGAAAAAGGUUUCCGUUUUGUGUGCAUCAUUUAGAGAACAUACCCUGUUCAAACCACACUGCACCUUUGGUUUGUUAUAUUUUUCCAUUCAUUUGCCAGAUUUUUUUUGUUUCUGUUAAUGAAGGCAAGAAACACAUUUAGAUAAGUUUGUUGUACUACUUACGAAAACCAUAAUCAACU
Sequence
(XR_001541572.2):
AAACAGGAUCUCGCCAUUCCUACCGUCGCACUACAAAUUCAGGAUGUUGCCAAGCCUCAGGUUGGAAUGAAUUGUAGCUGCCUCUGACUUCACUGAACCUUACGACAUGUGGUCAGGCCUUAAAUUUAACCAGCUCUUGUCUGAUGAUCGGAUGAAAUUGGCGUGUGCCUUGUUUUUUCUUGAUGGAUGGACUUAUCCCGUCCUGUAAUCAGAGGAUCAAAUGAUAAGUACAUAAAAGGAGGCACAAAUCACUUUUUUGUUCUCGAUUACGUAGGAGAUUUGCCCAUCAUUUUGUAGAGAGGAAGCAUAUAUAUCCUUUACUCAAUCAGGUGGAUCAGUGGCUCAUGUUAGUAACUGGAUUCUGAUGGACAAAUGAAAAGAUCAGUGGCUGGAUCAAUAACAAAAGCAGUAUAUUCCAAGAUGCAAAAAAGUUUUUCUUAUUUCUUGAAUUUUGUAUCCAUUUAAACCUUUUUAGGUCUUGAUACUGUUUGUUCUCAAUCCUUUUACACAUAAUUUGCAUGAAAAAAACAGUGACUGACUAUACUAAUUUCUAUCAGAAAGUGACGACUGUUGAGCUUGUUGCGUGCCAUACAUCAAAAUGGGAAAAUUGGGGGAAGCAGUAGACAAGUUGCUCUGCUGUGUAUUAAUGAACCAGUUAACAGUAGGCAUGAUGGAAAGAUUCGGGAAAUAUGACGAGAUGCUUGAACCGGGAUAGCCCUCUGCCAUGGGAUAAUUGGAACCUGUGCAGCUGUGCUACUGGUGAGCUCAGGAUAAGGCAUAUGCAGCUAUACGUACGUUGCGAGAUAAAGGCAGAGGGAAGGGAACAGUAUUCUCUUUAUCGAAAAUCUCUGUUGAUCCUGAAGAAUGGUGAUAUGUACGUUUGACUCGCGCUUAUUUAUUGGCAUGGCUUUGAACAAGUGAAAUUUGAUCAAAGAUUCAGUAGUGAGAAUAUGGGAGAUAUGCUAUGAAGGGACGACAUGCGAGUUAUUUGUGUCCAAUUCACACAUGAUUUUAUCUAUCUUGAACUUUUUUUGUCCGGAUGUACAAAUGUCCAUUAUGGAGGAAACCGUGUACUAUUGCCUGCUCAUAACAUUCUUUACUGCUA
Sequence
(XR_003239417.1):
AAACAGGAUCUCGCCAUUCCUACCGUCGCACUACAAAUUCAGGAUGUUGCCAAGCCUCAGGUUGGAAUGAAUUGUAGCUGCCUCUGACUUCACUGAACCUUACGACAUGUGGUCAGGCCUUAAAUUUAACCAGCUCUUGUCUGAUGAUCGGAUGAAAUUGGCGUGUGCCUUGUUUUUUCUUGAUGGAUGGACUUAUCCCGUCCUGUAAUCAGAGGAUCAAAUGAUAAGUACAUAAAAGGAGGCACAAAUCACUUUUUUGUUCUCGAUUACGUAGGAGAUUUGCCCAUCAUUUUGUAGAGAGGAAGCAUAUAUAUCCUUUACUCAAUCAGGUGGAUCAGUGGCUCAUGUUAGUAACUGGAUUCUGAUGGACAAAUGAAAAGAUCAGUGGCUGGAUCAAUAACAAAAGCAGUAUAUUCCAAGAUGCAAAAAAGUUUUUCUUAUUUCUUGAAUUUUGUAUCCAUUUAAACCUUUUUAGGUCUUGAUACUGUUUGUUCUCAAUCCUUUUACACAUAAUUUGCAUGAAAAAAACAGUGACUGACUAUACUAAUUUCUAUCAGAAAGUGACGACUGUUGAGCUUGUUGCGUGCCAUACAUCAAAAUGGGAAAAUUGGGGGAAGCAGUAGACAAGUUGCUCUGCUGUGUAUUAAUGAACCAGUUAACAGUAGGCAUGAUGGAAAGAUUCGGGAAAUAUGACGAGAUGCUUGAACCGGGAUAGCCCUCUGCCAUGGGAUAAUUGGAACCUGUGCAGCUGUGCUACUGGUGAGCUCAGGAUAAGGCAUAUGCAGCUAUACGUACGUUGCGAGAUAAAGGCAGAGGUACUAUGACAUAUAUUACUUCUCACAAGUUAAGAAGUACUAUCUGUUUAUCUUCUCCAUGCAUCACAUUUGCUGAUAAAUGAGUAAUAUGAAGCACUUGCAAAAAGUGUGCUCUAUCUGGCUUUAUUACUAUCAUAUAAAAAGUUAAAGAAAAUGGUGAUCAUUUUAGAGAUAAGGAAUAUAUUCAUGUGGGAAUUUCAGUUUUUGGUAGACUAUUUUAAAGACAAAUAGUGACUCGUUCCAUUGCUUGACAUGAACAACUGACUGGUGUAUGAAUGAUCAGCAUUGUCAGUCAUAUUUUCUACCUAUGUACCUGUUCCAAUAGAUGCAACUUGUGAAAUCAAAAUUUUCUUCCAUGUUUACAUGUUCCUCUAUUGAUUUUUUUUUCUGGAUUGUAAGAUACUACUACUAGAUAUUUUGUGUUUUCCCUUAUGAGCUCCACCUCCACUUAUGGCCAGUUUUUUUUUGAGGGAAUGCCAUUCGGCUAGCUUUAUUGAUCAUUAAACAUUGUUACAUCGUUUGCCAAAGUGCUUAGAAUAUAACCAGGAGGUUCAUCGACCCAAGUACACUUAUGGCCAGUUACUUACACUUAUUUUCCUCUAUUUGUCUCAGAACAGAUCAGUGUGUUAUAAGUUUUAAUUAAACUGAAUUGGGGAGAUUGUGUGAAGUGCAGGGAAGGGAACAGUAUUCUCUUUAUCGAAAAUCUCUGUUGAUCCUGAAGAAUGGUGAUAUGUACGUUUGACUCGCGCUUAUUUAUUGGCAUGGCUUUGAACAAGUGAAAUUUGAUCAAAGAUUCAGUAGUGAGAAUAUGGGAGAUAUGCUAUGAAGGGACGACAUGCGAGUUAUUUGUGUCCAAUUCACACAUGAUUUUAUCUAUCUUGAACUUUUUUUGUCCGGAUGUACAAAUGUCCAUUAUGGAGGAAACCGUGUACUAUUGCCUGCUCAUAACAUUCUUUACUGCUA
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
1
NEP:
0.2%
LE_num:
LEP:
6.1%
ME_num:
MEP:
90.65%
HE_num:
HEP:
3.05%
Type:
HCR (High-Capacity ncRNA)
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
callus
Tau :
0.74
Avg Expression:
7.42
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
Num. | Condition | log2(FoldChange) | Padj |
---|---|---|---|
Tip: OSA-LNC107279536 is not a differential expression ncRNA. |