Chr:
Chr11
Start:
13717050
End:
13719262
Strand:
-
Ref_name:
LOC107279293
Sequence
(XR_001541176.2):
GCAGUCGCUUCUCCUCCCUUCUCCUUCACCCCGGCCCGCGCUCGCUUCUCCGCCCCGCACGCGCUCGCGGUCGCUUCUCCUCCGUCCCCUGCGAGAUGCGCGGCGGGCCCGCCGCGGAUGCGGUCGAUUCCCCUUCCCUUUGCGCUUUCUUAGGAUGUUCGCUGUCCUCCGCUUCCCCCCGCACCGAUCCUCCCCCUAGCCCGUCUUCGCCCCCCAUCGCAUCGCCUCCCGCACCAUCAAGAUUCCGGGGCCGGAGUCAUGCCCCCAGCGCAGCAGGUGGACCCUCCGCCCCAUGGCCGCAUCGCCUCCCCCCAGCGCUGCAGUCGCCCCUCCCGCUCUGCCCUGCGACGUCGCACCCUAGCGCCGCAGGUGCCUCACACCCCCAGCAGCCGCCUCCCAGCCUCUUCGCCUCCUUGGCUUGUAUGGAGAAAGGGAACCAUCGUUGGGCGCACGCUGAAACGGAAACCGUUCGAUCCCCGAGUCCCAUCUAUUCAUCUUCAGUUUUUUGAAACAGUACGUCGCCGCUUGCUUUAUACUGGCCUUCUUUCCCGUCCUAUUUAUGUAUGAUGAUACACACAACAGCUGAAGAAAAGUGGUACACAGCAGCUGGAUCAAUCUGCUCGGCCAGCUAGUAGCUUCUCCUCCAUACAAGCACAUCCUUGGAUUGAUCUGCUCUAGGAUUAACUACUUCGAUUUCGUCUUGGGUUUAUUACUGGAUUAAGUAAUCCACAACCGUUUUACCCAGGUUGUUGAACUAUUAUGGGGAAAUUUCUUUGACGAUAAUUCCCAACUUAUCAAAAGUUUGGUGAUCCUUUAGUCAGCCCUGUAAGCAUGAUUCAGUGAAGCCAUGGCUCAGAUGGCUUUGGCAAUUCUUUCAGUAACCAUCAAUAAUGCACUAUUGUGGUGUUUUACAUGAGGGGGUCUCAAUGCACUCAAAGUGAAGCAUUGCUAUCAGAUUAUUCCUUGCAAAAGUUGCUCCACUAUCAUCCAGAAUUUCAGACUGCAGUUGGUAUUGCGUCAGUUUCCCUUCUUUGCUUAUUUUUUUUUAUCUCACAAAGUGUACUUGGAUUUUUAAAUUCUAUUUCAAUACAAAUAUCCCGCCGCAACGCGCGGGGUAUCAACUAGUUUAUUUUAAUUCUAA
Sequence
(XR_003239210.1):
AGAUGCAGUCGCUUCUCCUCCCUUCUCCUUCACCCCGGCCCGCGCUCGCUUCUCCGCCCCGCACGCGCUCGCGGUCGCUUCUCCUCCGUCCCCUGCGAGAUGCGCGGCGGGCCCGCCGCGGAUGCGGUCGAUUCCCCUUCCCUUUGCGCUUUCUUAGGAUGUUCGCUGUCCUCCGCUUCCCCCCGCACCGAUCCUCCCCCUAGCCCGUCUUCGCCCCCCAUCGCAUCGCCUCCCGCACCAUCAAGAUUCCGGGGCCGGAGUCAUGCCCCCAGCGCAGCAGGUGGACCCUCCGCCCCAUGGCCGCAUCGCCUCCCCCCAGCGCUGCAGUCGCCCCUCCCGCUCUGCCCUGCGACGUCGCACCCUAGCGCCGCAGGUGCCUCACACCCCCAGCAGCCGCCUCCCAGCCUCUUCGCCUCCUUGGCUUGUAUGGAGAAAGGGAACCAUCGUUGGGCGCACGCUGAAACGGAAACCGUUCGAUCCCCGAGUCCCAUCUAUUCAUCUUCAGUUUUUUGAAACACUGAAGAAAAGUGGUACACAGCAGCUGGAUCAAUCUGCUCGGCCAGCUAGUAGCUUCUCCUCCAUACAAGCACAUCCUUGGAUUGAUCUGCUCUAGGAUUAACUACUUCGAUUUCGUCUUGGGUUUAUUACUGGAUUAAGUAAUCCACAACCGUUUUACCCAGGUUGUUGAACUAUUAUGGGGAAAUUUCUUUGACGAUAAUUCCCAACUUAUCAAAAGUUUGGUGAUCCUUUAGUCAGCCCUGUAAGCAUGAUUCAGUGAAGCCAUGGCUCAGAUGGCUUUGGCAAUUCUUUCAGUAACCAUCAAUAAUGCACUAUUGUGGUGUUUUACAUGAGGGGGUCUCAAUGCACUCAAAGUGAAGCAUUGCUAUCAGAUUAUUCCUUGCAAAAGUUGCUCCACUAUCAUCCAGAAUUUCAGACUGCAGUUGGUAUUGCGUCAGUUUCCCUUCUUUGCUUAUUUUUUUUUAUCUCACAAAGUGUACUUGGAUUUUUAAAUUCUAUUUCAAUACAAAUAUCCCGCCGCAACGCGCGGGGUAUCAACUAGUUUAUUUUAAUUCUAA
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
1
NEP:
0.2%
LE_num:
LEP:
6.71%
ME_num:
MEP:
89.84%
HE_num:
HEP:
3.25%
Type:
HCR (High-Capacity ncRNA)
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
anther
Tau :
0.63
Avg Expression:
5.28
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
Num. | Condition | log2(FoldChange) | Padj |
---|---|---|---|
1 | Nipponbare // leaf // Non-inoculated--/--Nipponbare // leaf // Inoculated with Pyricularia oryzae | -1.02988914186557 | 0.00888002516060882 |