Chr:
Chr10
Start:
22787345
End:
22794595
Strand:
-
Ref_name:
LOC107279154
Sequence
(XR_001540498.2):
CAUUAGCAAGCAUGAGCGCCGCCGGUAGCAACAUCAAUUGACCACCGCCUUUCCACAUCCCCUUUUUCUGACGCUGCGUUUCCCCUUCCUGCAACCAUCGAUGGACUUCCUGAACUGUGUCUAGAAUCUGAUUCGACCGCAUGGCAAGCCAUCCACACACUGACGUUGUGACAUGAGGAACCGAUAGGAGAUGGCCAUGCUACGCUUCGCUUGGUGGUUUAGUUUCAUUUGCCAUAUCCCCAAUUCAUGGAUCCGACUACCAUUCACAAUUUUUGUUUUCUUAUCCUGCAGGGUUGAUUGGAUGGGUUCAUUUGACUCUAGAUGAGACAAUCAGGUCACUUCGCAAUCCUGCAAAUACUUAACGAUUGGUUGGAGAAAGGCUGUUCGGGAUGGAGCUGAAAUACAUGAGAAGAACUAAGAGAUAAAACAGAAAAUGUAGAUGCGGGAACAAGAACAGCGUGCCCAGGAUGGCUAUACACAAGUCGACUUCAAGAAAAUGUGAAGGGCUAAGAAUGAGAUCAAACUGUCACGUAAGUGUCACGUCAACACCACGUAGGACGAAGGCUUAAUCAAAAGAUCCACAUAAGCGUCACGUCAGCCAAAAAAACGGAGUCAAUAACAUCGAGGGACCUCGUUUCCACUGGUUUUAUAAGUUGGGAAUGCAAUGUAUCCGGUUUUCUAGACUGAGGAUGAAAAUCGGACUAGACGAUAAAUUGAGGGAUCUAAGGUGAACUUAUUCCUACCGGAAAACGCAGGAGGAAGGCCUUCGGGCUACUAGCCGGGUGAAAGGGAAGGAUUGAACCGUGUGAUUUUGUGACCUUUCGGUAGUUUUCUCUGUUAAUUCUGAUUAUUCACUGAUACACAACGUACUAAUAUAUAUCAAGGUAUCUGUGUGGAUAA
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
1
NEP:
0.2%
LE_num:
LEP:
88.01%
ME_num:
MEP:
11.79%
HE_num:
HEP:
0.0%
Type:
MCR ()
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
shoot
Tau :
0.92
Avg Expression:
0.69
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
| Num. | Condition | log2(FoldChange) | Padj |
|---|---|---|---|
| 1 | IR64 // leaf // ethanol solvent (untreated control)--/--IR64 // leaf // Paclobutrazol (PB) | 6.73224587804356 | 0.0306147879865686 |
| 2 | Baldo // root // control--/--Baldo // root // 100 mM NaCl | 1.78228212157669 | 0.0446943437241658 |
| 3 | Vialone_Nano // root // control--/--Vialone_Nano // root // 100 mM NaCl | 2.08958096140554 | 0.0388121672345123 |
| 4 | Nipponbare // leaf // Non-inoculated--/--Nipponbare // leaf // Inoculated with Pyricularia oryzae | 1.77309210634153 | 0.0313662314684728 |
| 5 | Nipponbare // panicle // AM--/--Nipponbare // panicle // PM | 3.44646970751804 | 2.51499492658356e-06 |