Chr:
Chr10
Start:
8869979
End:
8879515
Strand:
+
Ref_name:
LOC107279126
Sequence
(XR_003238870.1):
AAGGGUGAAAGAUGGAAAGAGAGUAGAGAAUAGGACGGGCAGAGAUUGGAAACAUGGGAAAGAUGGAAAGAGAAUAGGGGGAAAGAUGGAAAGAGAAGAAGGGGGAAGAUGGGAGACAACCAAGAUCCAUUAGACUGAUGAGGUCCUUGCAGCGGUUACAUGUGAACAUGGUUGUACCAGUCUUAUAUAAUUUCUGCAAGAUUGAGAACCUUUAGUUAUAAACAUUAAUGGGAUGGCACCAUUAAUAGUAACAGCUACAUUUUCUAGCCCAAAAGUCCCAUCAGCCAAAAAUGUAGAUGUCCUCCAGUAUAUUCAUGUGUGUUAUUGGUCUGUAACAUUAUUUUGUUUGCUAAAAAGAGUUAUUGGUAAAUCUGUUUGAUUUUAUGAUUUAUAAAAUGCUCUUACACACUGGUUGAUAAUAUAAGUAUGCCUAUCUAUUGUAGUUGUAUUGUGCAUGGAUUCAGAUUUUUAUUAGCUUUUAAUUCUAUCAGUUGCUGCAGAGUGUCCGAAAUUUUAAAAACCUAAACCUUGUUUCAGGUACAACACCUGGGAUUGGUUUGAGAUCGUGUGAUUGAUCUCAUCAGCUCUGUACAUACAUUUCUUUCAAUAGUGCAAAUAUUAACCACAACCAUUCUUGAAUUUUAAUCACAAGCUCCAGUCUAUUUUUCUCUUAAACAACAGGUUAUUUUACACCUGAGUCUAGAUGUCUAUGAUAAGAAGGUAUUCCAUGUUCUGAUGGACUAAUAAUGUCUAUUUCUUGCCACUUAUUUUCAGGGAAGUAUAUAGCUGUUGGAAAAGAUCACUGUUCUUUUAUAGCUCAUAAGCAUUUUCUCGUUUGCUUUUAUGCAGCUUAGGAGAAAUAGAAGGCACCAUGUCUCUGAUAUUUACCUUUUACUGGGCUCUAAGGAUGAUAAAAUCCUGGAAUGAGAGACAUGGUAUGAUUUAGCUCUCUUGUACUUAUGCACCUAUGCAUAGGUUCGUGUAUCCAACAUAAGAGCCAUACGUCCAUAUUCUGCUUUGGACUGGCUGGCAUGGUAUAUAUGACUAUUGUUUAUUUCUUAUGAAGAGUGUGACAUUUUUUAUGGGUGCUAUGAAGAUCAAAUUUUUAACUGUUUCUUACACCAUUAAAUUUCUACAAAAAAAACAUAUUCUAUUUGUAGGAAAACUAUAUGUAGCGAAAGGUAAGUCUGAAGAAGCUUUUACAUAAACAUGUUUCGAGUUUGAUAUGAAGUGCUAUUGUUCUUCAAGAAUUUGACAACAUGUCAUUGCCUUCGAUACGGUGCUUGAAUUAUGCGUUCGAUAGGACAGUUUAUGUGGACCGUUUAAUCUUGGGGUGCUCUACAAAGAGGUAGGUGAUCAGUGAGCAGCAGAAGUUGCUGAAUGUUUCCAGGCUGCUAGAUUUAUUGAAAAAAUAACACCUGUAGAAUCUUUCUGCUGAUAUUUGUAUCUAUUGGUGCUAUAUAAAGUUAGAAACCAACAGCUAUUGUUGUUUGUCUGUUAAAAUGUUUCAGUCAUAGUGAUGAAAAUACUGCAAAACUCCAUUCAUGACCUACUUUAGGAUGAUAUUAACACUAUAAUAACAUUUAUUACCAAAACAAUAUAAAUCUCUCUUUCUUUGAUUAGUGAAUCUUAAAUAUAUCUUAUUCUAUGCUUAAUAACUAAAACAAUAUCAACUUUUGUGACUGAAAACAGUAUCAACUUUCGGCUAUUUGAAUUACUAAAUAUCGCCGUUGCAUUAGCACAUGCAUAUUACUUGUGUUGUUUGUUUUUGCACAGUUCCGAUGCCAGUCCUUUGGGCUUGUCAGUGCACAGGAAGAGUGAGAUUUGUCCUUCCGCUCACCUUUGAAGUAGAAGGUUCCAUUUGUUUUUUCUUUUGUAUGUGUUGUUUCAGUUUAUCAAAGGGUUGUAAAAUUCAUAUGUAUAGGGCACUGUAAGAACUAAAUUUAAUCAGAGCAUAAGAAACUGAUAUAAAAAACAAGUUUUUUGGUUGCGUCCAAAAAGUUUCUAAUGAAAUUUAGUAAAGGCACAUGAACAAUCAUGAUUAAGUUCAAAAGGAAUUGAAGUAUUCAAUAGAUUGAAACGAGUACCUUAGUUGUCGUUUGCAUACAACGCAUGUAUUCACGAAGGCAUCCGAUACACCACGUUCUGAACAAACUUGGGCAAGAGAGCUAUCCACACCAAGGUAAAUAAGAUAUUAUUGGUAUUUCACAACUGAACCUGUUACCUAAUGUGACCAGUUGAUUUAGUGCUUUUGCAACAUGUAAGAGAACAAACAAAUGAGUGAUAUUCAGGAAUCAAGGAAAACAAAAAGUUGUCAAUGCACAGAGUUUUUGUAAUUCAUCUUGUAGAAAUUAAAUAUAGAAGAUUAGAAGGAUGGCUUUUGAAAUCAUAGCAAAACAUUGCCACGCCAUGAUCAAUGUCAUGGUAGUAUUUUGUUGUCUUGCCAUGUCUGUUGGCGCAGCCAAACUCUUCCCACAUUAUGGUAUUAACACGGUGGGCUUAUAGUUAGUAGAAUCAUCUCUUUCUAGUUCUUUUGAGGUUUAAGUAGUGCUUUGGACCUUUAUGCUCUCAUUGCUGGCUAUGUAUAUUCAGUAUUUUUUUACUUGCUGGUUCCAAAGUAUGGAAAUGUUCACGAGUUUUUAGAACUAUAUCUCCACAGUGGGACACUUAAGGAUAGGAAUUUACUUGAUAAACUUUUAGUGAUAUUAGUAGAUAAUGGGAAUUUACUUGGUACACAACUGUGCAAAUACACAAUACUUUAUUAUUUAACCUAUACUUUCAUCAUAUGGAUCUGCACAUAUAUAUAAUGAUUAAAUACUGUAUCUUGAUCAUAUGAUGGCUUACACACAUGAUAUUAUGGUAUUAUUUGCUGCAAGUAUAGUGCUAUGAAAUAAAUCAUCUUUGAGACUUCUAAGUAGUAUUGGACCUCCUAAUUUCGUUAUAAAUAAUUUCAGUAUUAUUUAUAGAUAAUGAUCACCCAACUUAAUUGUUUUUGGAUAGGAGCAACAAUCAAGUCAGAUCUUUUUUUAUUUUUUCAACCAGCUAUUUUGAAUCCAAAAACAGACUAAGUCGAUUUUAUGUGGCUAGAUGAUAAGGUUAAUAUCUGUAGCUAAUCUGGUUGUUUCUUUUGUAGGUUUUGGAGGGUUUUGCGUCUGGGGGAUCCUUGCAAGUAGCUCACAAUAUUAAACCUAGAUUAGAUUUAACAUCUACAGAGUGAACAAUCUAUGCUUAUCAAGUCUUUGGUAUUGAAUUGAUGCCAGAUUCAGAGAAGUUCAAAGGGAACAACUCUCAUCCUUAAUUGAGAUGCCUACUUCUGAAAGUCUUCAGACUCACCUUUCAGCAGGUUUGUUUUCUCUCACUAGGAUGAUGCCUUCAUUGCCUGGUCAUUGUUGUUGUCCCACCUGCAAUUAGCACCACCAGCUUCUGUUACUAAGGGAAAAGGUACUUCAAUAUAUGCAUGAUAAACUCAGCCCUUGCAUAUUAGAUAGCAAUUUCUAGCAUAUUCCUUUAAAGACUGGUACACCUUGUGGGUAGAAAAAAGAUGCUAAAUUCAUGCCUAGCAGAUGUUGCUGCGAUAGCUUCUAAGAAUGCCAUACAUGUUCAUUGCUCCCAUUCAUUUAAUCUCUUUGGCUAGAUGAUGACUAGACUGCCGUGUUCCUGCACGUACGUGGUUUACUUUGAAAUUUAGAUAAAAUAUCUUAAGAAAUUUCCAUAUGUAGGGGGUGUUAUUAUACAAUCACAUGUAUUCCCUCAAUUUAAGUUUAUAGAUUGCAUGAAAAAAGUGUGUAAUAAAUUUAUUAUCAUGCAAGGUAUAAAAUGAUUUGUACCAUUUUAAAAGUUGCUAUCAUGCAUGUAUUUGUGUGAUUUGUGUUGCAACGCUCAUGUACUUGGAUAUAACCAAUGACCAAUGCAUGAUCAAUUAGAUCUAUGCCUCCACAUUUUAAAGAUGAUGAAUGAUGUAUAUAUGUGGCCAUUGCAAUCUGAAAGAAACUAUGUACUUAUAUGCUGGAGUACAUCUGUACAUGGCAUACUUAAUAUUAUGUAGCACUUUUUAGUCUAAACAUUUUCUCUAUAUUUCUAACUGCAGCUUGAGGUUCUAAAUUCUGAACUAGGCUCACAUUUUUAAAAGUGUGAUAAGUUCAGUUGUGAAAACAUGUGUUAUAAUAAAUUUAGGAUUGUGCUGAAUCUAAAUUUUUGUCCCUUUUUUUAAAACGUGUAAAACAUAGUUUUGCAUAUAUAAAACCUAUUGGGUGAUGGAUUUGUAUUAUUGUUUUGCUAUAAUAAUCUUUUCAGACAUAAAGUAAAUAUUAGGUUUGUGUAAAAAUAAAGGCAUUAGACUGGCUCCCUUGCUAGCAGCCUAGCAUUAUAUUGUUCAAUCUACUCACAUGUUCUUGUUGUUAUUAAGGAAAUUCUAAUCUUGUGUCGUCAAGGAUAAAACUCUUGGAUGGAUAAAAUUCAUUGAGUAAUACGCUAGAUUUGUUUUAAAACUCAUAUAUCUUGCAUAAAUAAUAAUCUGCCUUUCAUAGUACAUGUAAGUAGUGAAAGUAAUUUUCAACGGUUUCAGGAGCAGAUGAACAUGCAAUCUACCUAUGCAUUCUCUAUUGAGAAUUAUGCCUACAUUAGUUUAGUUUUAUAGAGGAAUAGACUUAGUACAUUUUUUCUUUAAGUAUCGAUGUAAGACUAUCCAACCAUUUCAAUUAUACAUACUAUGAGUUCAUGUCAAUUCUAUUGGUAGGCAAAUUCAUUUUGAUUAAAGUAGAGUUUUCAUUUCCUAUCUCCUCUGGAAUAUAGGAAAUACGGAGGAUUUGAACCCUAUGGUUUUUGUUGUAACUUAUCUAUAAUUAUAGUAGUUGGAUAAUUCGGUUAAGCGACUUGCAUAUAUGGCCUAUUUAACUACCUUUGUUGACAACCAUGAUAAUUCCUAUGGAUUAGAUCCAAUUGAAAUCUUAGGCAUCCAAGCGCUGUUAUCUCUAACAUUAUAUACCAAACAUAAAAGAGCAAUAGCUCCCUGUAAUCACUAAGAUAUGGCAUGAAAAUCUCUUAGAUGUGGAAGCUUUUUCUUGAUUGUCACAAAAGGUGCUCUUGCUUAGAUGCGUACCAAUGUCAUAUCUCCAAUCACCCUGCUAAGGUAAGUAUGAUUUGUUUGCCACAUAGGAAAGUAAUCAGUGUGGUUUGAAGAAAUAAAAUGGCAUGCCAUUUUUAAUCUAAAAUGCAAAAACAACACUUUUAGUGUGUAUAAAGGGAGAUAGAUUGAGCUAAGUUUACAUGUUGUACUAUACCUUCAGAUUUCAGUUCUUUGCUGCAGAUAAUAGUGGCACAAGGUUCCUGGUUUGAAAAUUUUUUGUUACUGCAAAAAUAGUCAAUAAAACUUCGCUAUUGUUUGUGUUGCUUAUUUCCAUUAAAUUACUUCUCAGAAGCUAUGUUCCUUCUCUGUCUUGCUAGCUUGUCCUUUUCACUGGGUUCAAUUGUAAGAAAUGAAUUAUUCAGCCACUUAACCCUUGAAAGGACAUUUAAUCUUGGGAUCCCAUAAUCACCUACUUGCAUCUUAUUGUUUUCCAAUGCCUGGUCUAUUAGGAAAGUUGUCAAUGAUUCACACUUUCCUCUUUACGGUUAACAUAAUUUUGCUUAAGAUAUUUUGUCAGACUAUUUUCUUCUGCUGAUAAAAAACACAAGCAUCGUUAUUUUUUGUAUUCCUUUGCAUGUUUGUACAAUGUGAAAACUGUAAUCCCCUACCAAUAUUUUUUUCAAACCAAUAACAGGUACCAACAUUUUUUUUCUAAUUAGUGGUUAUUAGUACAUUUUGUAGCCUAAUAUAUCUGUAUAGCAAAAGCAAUAAUCAAUCUACAUAAACUAACACAAUUGUUAACAGUAGUUGUUGAAGAAUGCUAUCAAAUAGUGGGUUAGCUUUUGCUUUUGCUAUGAUGCCUUUUGAAUAACUAUUCUGCUUUUAAAUGAGCAAGUAAUGUUUUCGUUCCUCAGUGAAGAGAUAGCAAAUUGCUGAAUUCCUAUAACUGUUUUUGAUUGAAAAGAUGUAAUAUGCUUCAAUUGCUUAUAUGUUGCAUUGGCUUAAAUGAAGUUAUGAUUUGAGUUAGAGAAAUGUUAUUAACCUUCAUACUUGCAUCAGCGUUGGAGCAUGAAAGGGGAAGCGUGUUCUGACUCUAUUGGAUCAAGUCAGAUACUAAGCCUUCUACUACUACUUAGGUCAUAACAUGAGCGAUUCGGCAUAUUUGGAUUCCUUUCCUAUAUUUCCACUCAUGUGGUACUUCAUCAUACGAUUCAUAUAAGAUCAAUCUGCAGCGGAACCAGAACCACGCAGUGAAGCCAUGAGAUCUCAGGGGAAAUUUUAACUGCUAUUCUUCCUUUUCCCAUUAUGGUUCAUAAUUCUGAUAGUACCUUCUACCAAUGUGAGCUACUGAUAGUUUUGGCUGCAUCUCUAUUGUUGGCCUUAUUCGAGCAUGGUAUUCACAAAUAAUUUUUGUUUUCUUUGUGAUGAAAGAUUAAGAUAAAGCUUGACACCGUCUCUGAAAUGAAAAGUACUUCUAAUGUAGUGAGUUUUUCUUUGAAAGAAAGAUCAUUCUUAUUGUUGAAAUAUCCUUCGUAUUUUUUCAGCAAAAAAUAUCCUUCAUACAUUGUGAAGUAUGUAAUGAUCAAAAGUUCAGAACCUUAAGUUCAUGAUGUCCUUUUAUUAAUUAAAAUACUUGUGCCAUUCUGAUUCUAGAAGUAGAUUAAUCAGUUGUAAAAUCAAUGCUUAUUAGUAAGAAAUGGUAAUUAGCCGUGGAGCGUGUGCGUGAAAAGCGGAAAGAGUUUUGCACUAAAGAUCUGUCUGCUACUAACAGACCUAAAAUUUUGUAUAUAAUGACCAUGAAUCUGUGAUGUAUCAGUCUUGAUUAUAUUUUAUAGAUUGGCACUUUUCACAUUAAUCAUCAAGGUUUGCGUUCUAAGUGAAUAUACAUUAUUUUCCUUAGCUUAUUUCUGGUGGCCAAAUCUCAGGUUGAUUGUUUGCUGCUUCCAAAUUAACAAUUCAAUGUACUUGAUGUAUUCUACUUAACCUUCGCAUUUUUGGUAUUGUAACUCUGAAGUGAUUUAAGCCUGGUUUUUGGACAAAUGAUCAUCCAUUGAGGCUGCUACAUCGCUUCCAGUUUUGAUCUCCAUCGGAUGUCCUGUCUCUUCAGCAGGUCGUCCAUGAUUCAACCAGCUCGCACAUGAGGCAACAGUCCCCUCCAACCCAGGUUUGCCAGGUUUGAUUGCUUGGUGCAAAUAAGGAGUAUGCCAUGCAGAUCAAGGUGCAGGGCAUACGGAGAUGCAGUCGUUUUUAUGGCAUUCCUCAAAUCCAGCUUAAUAUUAUGCGGAUUUUAUCUAUUCUGCAUACAUUAUGCCUAUAAAAUUUUCCUUGAAAAUGCCAACAACAGAAGUAAUUUCAAGUGUCCUAAAUUGGGACAUGUUUCUCUUUAUAAGUAAAAUGUUCUCUCAAGAAGUCUCAUAUCAGAAUACCUGCUAAGAUAUUUCUGGGUGUUCCCUUAGAAACAUUUUCAUUUGUAAUAUAGUAGUAAAAUUAAUCAAGGUUGUCAAAUCAAGGCAUAAUAGUAAGAGUUAGUACAGAUAGUUAGCCCUCUUCUGCAGGCCGUGAAUUCAUUUUCUUUAUUAGUGCCACCCGGUGCUUAAUUUCUUACCCUGAUGUCUGACGAAAUUCAGUUUGGUUCUUUUCUGUAGUAGAACACCAGCGCUGAGAUCUGAAAACUACAACAAGGUACCAACUUUAUACCCAUCUAAACUCCAGUGAUUUCAGUCCGUUCUGUUUACCUAUUUUGUUUUUUCUCACCUUCACACUCUUAUGAGAUCUAAGAGCUACAACCAGGGCUGGGUUUUCGCUUUCGAUUUUGCUCAAAAUUUCGGCCAUUUCAGUAGCACCGAAAUUCCCAAAAUUUUGGAACUUUUGACACUUUUUGGACCGAAAUUAUUUAAAAUUUUAACACAAGUUGACUGAUUUUGAAUAAAUUUUGACCAAAUUCACAAAAAAAACUGAGAAAAACCAAAAAUCACUGUAUAUAUUUUGUUUUUCUACCUUCACCUGUGUUAUGCCAUGUAAUCAAUUGGGGAUGUGGUUUAGUUUGUUAUGCUGCUAAUGAAUGCCGUAUUUAAUUUUUGAAAUGGUCCUUGUUUUAUUGGUACAUGCAUGGAGAGGUGAAAAGAUGACUAUAAUUGAAAUGUAUGUGCUACAAACAACACUCCAUCAUCACCAUAUGUGAUCACUAGGAAGAAUGUCUCUUGAUAAAUUGAUGAUGAACCUUGAGUUCCACUCGGCACUCAAGGCUGUUGUUGGCCCGAUCUUUCGGUGAGUUCAUGAUAACUACGAUUUGGAAGAAACGUUGACGACUCGACUACAACCGUAUAAGACGUUGUGUUGCGCCUUUGCGAUCGAUACACCUCUCCGUGGGUUGUUGAUCUUGCCGGUGCAGAUCAACCUUAUUCCUACAAGCAAAUCGAAGAAACAAGCAAGAACAAGAUAAAAGCAAUCUGAAUUGCAAAUAGGAAUGAAUACACACGAUAAGUUGGAGUUUCGAAUACAAGCAGGUGGAUGGUCUAGCCGACAUGCGUGCUGCAAGGAAGUAGCAAUGGCUAAACUUUCAUCUAAACAAAACCCGAGAAACCCUGAAGGGGUACCUAGCUAUUUAAGAAUGUGGGAGAACGACCAAGAGGGUCCUAGGGUCGUGCUCCACCAGCUUGGGGCGCACCCCACAUGGGCCCCACUUGGGGCCGGGGUCCCAAACAAAGU
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
1
NEP:
0.2%
LE_num:
LEP:
62.8%
ME_num:
MEP:
31.5%
HE_num:
HEP:
5.49%
Type:
HCR (High-Capacity ncRNA)
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
carpel
Tau :
0.95
Avg Expression:
14.28
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
| Num. | Condition | log2(FoldChange) | Padj |
|---|---|---|---|
| 1 | Amaroo // embryo // dry seed 0 h--/--Amaroo // coleoptile // 4dA | 2.06931987097836 | 5.51174503715385e-18 |
| 2 | Amaroo // embryo // dry seed 0 h--/--Amaroo // embryo // 3hN | -1.13219349208091 | 4.42882939398753e-07 |
| 3 | IR64 // panicle // Dawn--/--IR64 // panicle // Dawn + 10.5h | -1.09642728191285 | 2.81316337816111e-09 |
| 4 | IR64 // panicle // Dawn--/--IR64 // panicle // Dusk | -1.07408896994804 | 1.14626538341756e-07 |
| 5 | WD20342 // leaf // none (control)--/--WD20342 // leaf // 0.5% Na2CO3 solution for 36h | 2.31500976390451 | 0.0122206588226771 |
| 6 | 9311 // leaf // control--/--9311 // leaf // salt | -1.0464217294994 | 9.55636767840749e-06 |
| 7 | Amaroo // embryo // dry seed 0 h--/--Amaroo // embryo // 24hA | 1.19357538511195 | 9.97554279002628e-13 |