OSA-LNC107278971


Function Link


Basic Info

Chr:

Chr10

Start:

8985010

End:

8988844

Strand:

-

Ref_name:

LOC107278971

Sequence
(XR_001540216.2):

GGGAGAUCCAAACCAAAUCAGAUCGAGAAGCAACCAUGGAGCAGCAGAAGAAGAAAACAAAGAAGAGAAAAGAUGAAGAAGAUAUCAAAAAUCCAAACCCAAGCAAGGAAUGAAGCCAAUUUCAGAAUAUAAACAUAAAGUGAGCUUGGAGAUAGAGGGGACUAAAGAAAAACACAAGAUGAAAGAAAAUGCAGGAAUUAUUUCAAAUGCAGAAUCAAAUGAGAAUAGCAACAGUAUGACCCAAGGUACAGAUAUUCAUCAACUACAAGAUAUAAGGGGAAGUUUAAAAGAACCAGAGAAGGACAAAACAGAAACAAAGCAUAUUCAAGAAAGAAGUUCUACCAUCACACAAAAUUCAGGAAUAACUGCAACUCAAAUACCACAGAGCCCAGCAUUGCUACAUGAUGAGUUAAACAUGCUAAAACUCUCGAGCAACACCGGUAGCACAGUUAUCAUAUAUAAGUCUCAUGCACCAAGUGAUAAACAGUCCACGCAUAAACAUACAACCUAAUAUGGCAAGCCUAGAAAGUUUCACAAGUCUCCUUCAGACACCCUCGGCCUUUCAUUGCAGAAUUCAAUGAUCCUAACGACAAGCAGGUUUUCUCCUUAAAACACAGAGCUGAAUGACAGAAACAGUGCAAUAUCAUUGACCAAACCCGAAAAUCUAUCCAUCCAUCUGUGCUAAUCUUACAGAAAAAUCAACGGUCCAAAAAACGACAAAUCCAGCCACCAAAAAUCAUUCGACAAAUGUAUAGCAAUUUCGUCUAUUAUUGGUGCUACCAGGGGAGACAUAAGACGCAUUGCUA

Sequence
(XR_001540217.2):

GGGAGAUCCAAACCAAAUCAGAUCGAGAAGCAACCAUGGAGCAGCAGAAGAAGAAAACAAAGAAGAGAAAAGAUGAAGAAGAUAUCAAAAAUCCAAACCCAAGCAAGGAAUGAAGCCAAUUUCAGAAUAUAAACAUAAAGUGAGCUUGGAGAUAGAGGGGACUAAAGAAAAACACAAGAUGAAAGAAAAUGCAGGAAUUAUUUCAAAUGCAGAAUCAAAUGAGAAUAGCAACAGUAUGACCCAAGGUACAGAUAUUCAUCAACUACAAGAUAUAAGGGGAAGUUUAAAAGAACCAGAGAAGGACAAAACAGAAACAAAGCAUAUUCAAGAAAGAAGUUCUACCAUCACACAAAAUUCAGGAAUAACUGCAACUCAAAUACCACAGAGCCCAGCAUUGCUACAUGAUGAGUUAAACAUGCUAAAACUCUCGAGCAACACCGGUAGCACAGUUAUCAUAUAUAAGUCUCAUGCACCAAGUGAUAAACAGUCCACGCAUAAACAUACAACCUAAUAUGGCAAGCCUAGAAAGUUUCACAAGUCUCCUUCAGACACCCUCGGCCUUUCAUAAUUCAAUGAUCCUAACGACAAGCAGGUUUUCUCCUUAAAACACAGAGCUGAAUGACAGAAACAGUGCAAUAUCAUUGACCAAACCCGAAAAUCUAUCCAUCCAUCUGUGCUAAUCUUACAGAAAAAUCAACGGUCCAAAAAACGACAAAUCCAGCCACCAAAAAUCAUUCGACAAAUGUAUAGCAAUUUCGUCUAUUAUUGGUGCUACCAGGGGAGACAUAAGACGCAUUGCUA


Expression Capacity

HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.

HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.


NE_num:

1

NEP:

0.2%

LE_num:

362

LEP:

73.58%

ME_num:

115

MEP:

23.37%

HE_num:

14

HEP:

2.85%

Type:

HCR (High-Capacity ncRNA)


Tissue Specific Expression

cutoff: tau > 0.9 and Average expression in the tissue > 10


Tissue :

root

Tau :

0.83

Avg Expression:

2.29

Tip: OSA-LNC107278971 is not a tissue-specific expression ncRNA.

Differential Expression

cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01


Num. Condition log2(FoldChange) Padj
1Nipponbare // root // "mock,14_days"--/--Nipponbare // root // "auxin(50CM_2,4_D),14_days"2.825179578367230.0348489975360263