Chr:
Chr9
Start:
10396281
End:
10397043
Strand:
+
Ref_name:
LOC107278906
Sequence
(XR_001539827.2):
UUUCCCCAAAUCAAAAAUAUCCAGAACCCUAGCGAGAAGCGGCGGCGCAAGCAGGGGCGGCGCGCGAAGGCCAGCGCGCGGCGGCCCCGCGUGCCAGCGCGCGGCAGGGUGACGCAGCGGCCUUGUGGGCCAACUGCCGCGGGCCAGCGCGCGGCGGAGAGGGGCAGCGGUGUUGCGCGCGGGCAGGGAGGCGCGGCAGCGGUGUGCACGGGCAGGGAGGCGCGGCGGACCCGCGGCCAGCGCGCAGGAGGAUUCUCCAUCAUCUCAUCUCAUGCAUGCUAUUGCAAACUGCAGCAGUUCAUUGUUCAGAAAAGGAAUCCACUACUGUAUGUAUGGUUUCUUGGAGAAUGGUGUGUAUGUUGUCAUUAAGCCUUUGUUAGUCAUGAUCUCUCCCAGGUUUCAAAAUUCAUCAGGAGAAUUCAGAUUCAGAAUUAAGUUCCCUGGCUGGUGGGUAUGGUAAAUUGCAGUUAUAUCAAUUGAUCAAAGUUCAGAUCCAGAACUUUGACUUCUUGUUCCAGGGCUUUUGUUGGAUAUUAAUGUGUAAUGUUGAGUAUUGUGCUACUUUCUGAUAAUUUGUGAUGCUUGCACAUGUUAUAUGUGAUAUGUUGGAAAUAUCUAUUGAAAUUGUGUCGAAAUUAUUGCUGAAAUUUUAUCCAUGA
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
1
NEP:
0.2%
LE_num:
LEP:
71.54%
ME_num:
MEP:
26.42%
HE_num:
HEP:
1.83%
Type:
HCR (High-Capacity ncRNA)
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
anther
Tau :
0.90
Avg Expression:
5.78
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
| Num. | Condition | log2(FoldChange) | Padj |
|---|---|---|---|
| 1 | Amaroo // embryo // dry seed 0 h--/--Amaroo // embryo // 12hA | 3.29924126890156 | 0.0457812490408778 |
| 2 | Nipponbare // panicle // AM--/--Nipponbare // panicle // PM | 3.75565256816376 | 0.0172939418920747 |