Chr:
Chr11
Start:
13087638
End:
13089302
Strand:
+
Ref_name:
LOC107278508
Sequence
(XR_001541302.2):
CAUCUCGCAAUUUCUUGGUGAACUGUGUAAUUGGUUUUUUCUACAUUUAAUACUCUAUACAUGUGUCCAAACAUUUCACGUGACAUUGUGAAAAAAUUUGUUUGGGAACUAGACAAACCCUAACUGUUGAUGUUGCGGACAGCAGAAGCAAAGUCGGGCAUACGAUGUACUGUAUCAUAGUAACUGUAUCUUGGAGCGGAUCAGGAAUGAGAACUCUAUUUCUUGAAGUAUGAUGAGCUAGAACUAGGGCCAUCAAUGAUAGUGGGGCCAGCAGCUGAUGGGGCCACAACUUGCAAAUGUACAACGGAUCUCGAAAAGUUUCGUCCCGAUAGUUUAAAAAUGGAUAAUAGGUCAUUCAGCGUAUCAUUAACAAAAUAAUAAUAACAGCAAAAUAAUAAUAACUUAUAUAUAAAACUUUUAUAUAUGUAUUUUAGUGACUUAAAAUACCAAUACUGAAAAAUAAACUUCGAUGAACAAACUUCAAAUAUUAUAUUUAAGUUUUAAAAUUUAAAUUUUAGCGGCGACUAAUGCUGUAUGGAGAAAACGAUGGGGCCUUUCUUCUCCAGAAAGUUUUAUUUUUGUUGUUGAAUGGCCGAAUUGUUACAAAAUAGUUCGGAACAGAACAAUAUAUUUUUGUAGGAAAAAUACACAGGGAAUGUGCAAAAUUUACUAAACAGACAAUAUGUUUCCGUUGAACAAAGGUAGUUUGUUAACUUUUUUUCUAAGAGAAACAUUAGUGUGCCGUCGGUGUGUUUUGACCACAGAAACUGAAUGAAAUAUUUAGUUCGAUAACUGCAGCGUAUAAUCGAUUUUGGUGGGACCCACAAAAAUAAAUCUCAAUCCCACCUCUAUCCACUCCUCUCCUCUCGCGACCAGCCGGAAAAUUCCGCAUGCGCACGUUCUCGUUUUCCCUCGUUCCCCUUCCUUUGCCCUCUCCCUGCCCAAACAUUCCAAAGCUCCAAUCCGGUGAUAAUCUCUCCCUGCCCAAACAUUCCAAAGCUCCAAUCCGGUGAUAAUCUAGAAAUUAACCCAUGGAGGAGAGCAGAUCAGGUCAACCAGCUAUGGAUCCAACUAGAUCGGAUCCUUCGCGGUGCUCGUGUGGCUCGUGCUCGUGCUCAUGUGGGCUGUUGCACAUGAUGCCAUGGAAUCAGUAUGCCGCCGCAUACGGCGCCGCUGCAAGCUGGCUCCAGCGGUUGUGUUGGCGAGUUUGCUUCUCGUUGGCACGGUCGUGCAUCAACGAGGUCAUGGAGCGCAGGAGAUAAGCUCCCGAGUCCCACCAGUGCUAUAAAUAGAAGAACCGUAGAGAGGAGUGAAUGCUCUAAUCUCUCGCCAAACCCUAAAGCCGUGACGCUAUCUCAGCCAACGGCGUGAAGAAGGAAAGCAAAGCCGAAGGAAGAAGAAGAAAAGGCAAGAAGAAAAACAGAGGAAUCAAUUUCAAUGGCUUCUAGUGCAGGUCAGUAGAUUAAUUUGUAAUUCGAGUAAAUGUAAUUGCUUAUAAGCUAAAGUAAUAAGAUCCUGUAAUUUAGAACUCCAACAUUGUGGUAUCAGAGCUGAUCUUUUACCUAA
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
1
NEP:
0.2%
LE_num:
LEP:
88.62%
ME_num:
MEP:
11.18%
HE_num:
HEP:
0.0%
Type:
MCR ()
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
shoot
Tau :
0.93
Avg Expression:
1.10
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
Num. | Condition | log2(FoldChange) | Padj |
---|---|---|---|
1 | IR64NIL // root // control--/--IR64NIL // root // Al | -1.97120114621661 | 0.0238886870835542 |