RiceNCexp
Rice Non-coding RNA Co-Expression Atlas

OSA-LNC107278479

Function Link

Tissue-specific Expression analysis
Differential Expression analysis
Co-Expression Curve
Network analysis

Basic Info

Chr:

Chr8

Start:

7919543

End:

7922449

Strand:

-

Ref_name:

LOC107278479

Sequence
(XR_001548365.2):

UCUUGACGCGCGCUAAUUUGUUCGGAAAAUACCACAGCUUUCCACAGAACGUUGAAUUGAAAGGACCGAAAUACCCUUCAAUUGGGGAAGUUUGUUCUCCUUCCUCGGACGCUUUCUCCUCCAGGAGGAGAGGGAGGGACGAGCAGCGGCGAGAAGAGAUGCGCGGCCGAUCGAGGGCAAGAAGAGAGAGAGAGAGAGAUGGGAUUAGGGCAUGGGCUGAUGAUUGACCAUCGACGACCUGUGUUAGACGAGUGACGAGCCAGCGUUGAAUGGAGAAGGGGAUGGCAGGCUCAAGCUCAAGCUCGCGGCGCCGGUGGUAUCCAGCAAAGUAGACUAUUUUUUUGGGUGGUAUUUUCCGAAUUUUGCAUCCUGCAUCCCACAUGUGCUAUGUUAACCGAUUUUUCCAUUCUUUUUUAUUUAUGUGAUUUAAUUUCGUUUGUUCUGUUUUAGGUGCUGAGACAAGGAAGGUGUUGGUUGUAUAUGACAUUGUUGGUGAUGUGCUUAAAAACUUGACAGUAGUAUUGCUUGCUUACAUGCAUUCUCAAGGUUGUUACUUAUGGAAAUUUUCCCGUCGAGUCCUCAUUUCAAAGGGUUCCAAGAUGUUUGUACAUUGGACUUGCCUGUAUGAGUACAGCCUACAGGGGAUGGGUAUCAAAAGCUGCUAAUGCUGAGCAUUGCAGAUUAAUUUAACUUGGGACUCGGGUCAAUGGAGGUGAGUUUCUCUUCAACUGGAAAUUUGAUUAUUAUCAAGAUGAUGAGAUCUCACAGUGCGCUAGUGUUUAAUGCCAUGAGGAUUUUAUUGAAGAAUGCAAACUGCUAUAAUUCUUCCCAACAUAAACCCUGCAAUCUCACAUUUUCCUUGCUAUGAUUGUGGCGACAUGCUGUCGAUUUCUACAUUUCUGAUUUCCAAUCUGGACGGCGAGCAUUGGUCAGAAAAGGAUAUGGGGCACGGGUAACCUCUAAUGUUGAUGAAUCUGUUGUUACUGACAUAAAUCCGGAUAACAAGGACGUCCUGAGAUCCUGAAACGGCUACGAGAAAGGAAUGUUUUAAGUGAUGAUCGUAUAAUGUUCCUAAAAAAAGGGUACUCUUAUUUGUUCUGAAUUUUGGAGUUAUAUGAAAUCAUUUCACAUGCACAUUUACAUGCAGAAUUGCAGAUACAUCAAGGAGGGCAGCAGAGUUUGUAUUAUGGGGGUUGUUCAAAGGAACGACAGUGUGUUGAUGAUUGUUCAUCCAUCUGAACCCAUCUCGACUGGCACGAAGAUACAUCAAACAUGCUGAGAAAGAGAAUGCCUGUCGAAAUCCCUGGAUUUAUUUUGUGGGAUGUUAGAGUUGAAAAGGAUGUGCAAAUGCAGGUUGUGAUUAUGCAUUGGUUGUAUAGUGUUUUAUGUAUUUUUCUCUGUUUUUUUUCUCUUCUGUUGGGCUUUGGAUACUUGUAACAUGGAUGGCUUUAGUUUUACCAUGGAGCUGUUUGGGGAUUCUCAGUGGAAUAGAGUUCACAAGUUUUUGUUGUGAAGAAUUCCAGAAGUGUUAUAAAUUGUUCCAGUUUCAAUUUUAUGUGCA

Sequence
(XR_001548366.2):

CUAAUUUGUUCGGAAAAUACCACAGCUUUCCACAGAACGUUGAAUUGAAAGGACCGAAAUACCCUUCAAUUGGGGAAGUUUGUUCUCCUUCCUCGGACGCUUUCUCCUCCAGGAGGAGAGGGAGGGACGAGCAGCGGCGAGAAGAGAUGCGCGGCCGAUCGAGGGCAAGAAGAGAGAGAGAGAGAGAUGGGAUUAGGGCAUGGGCUGAUGAUUGACCAUCGACGACCUGUGUUAGACGAGUGACGAGCCAGCGUUGAAUGGAGAAGGGGAUGGCAGGCUCAAGCUCAAGCUCGCGGCGCCGGUGGUAUCCAGCAAAGUAGACUAUUUUUUUGGGUGGUAUUUUCCGAAUUUUGCAUCCUGCAUCCCACAUGUGCUAUGUUAACCGAUUUUUCCAUUCUUUUUUAUUUAUGUGAUUUAAUUUCGUUUGUUCUGUUUUAGGUGCUGAGACAAGGAAGGUGUUGGUUGUAUAUGACAUUGUUGGUGAUGUGCUUAAAAACUUGACAGUAGUAUUGCUUGCUUACAUGCAUUCUCAAGGUAUAGUUGAAUUUUAUUGGUUCAGAACAUAGGUUCACAGUUUCCAUCCCACUAGCUAAGAAAAUGAUAAAUCUGGAGAGCUGUAAAAAUGUUUGACCUCCACAUUGAAAAGUAGUGGGAAUCUGGUCCUCUAGGCAAUCAACCUUCAAGAAAUGAAGUAUACUUCAUUUGGUGGUGCUGGUUUCAACUCUCGACCAGUUUCAAAUGCCAUUGGUUGCAACUAUUGAGAAUUUGAUUCCUCUGGCAGAACUAGGAAAGAAGUCAUCUGGCCCUUUAUCUCCCGUUCUUCCUACAACUAGGCUAAUCACAUCAUCGCAAAAAAAAAAAAAACUAGGCUAAUCACAUCAGUACCUAUCUCCUCUGGACCUAUGAGUUCAUCUGGUGGUGCGACCUCUUUUGCUCACAGCCGGGCUGUUACAAAUCUGAAUGUAGAAGAUGGUUACUCAAUCAAGGGCAGCAUUCCGAAGUCAAUUCUCUGGAUAUAUGGUUGUUCUUCUCUUUGUGAUGGUGUUUCAUAGCAGGUGGAUUCAUUCUUGGCGCUGUUCAUAAUCCUAUAUUGCUGGUAGUUUGUGGUGGUGAUACUUUGUUUCUGUCGCUGCAAUUGCGAUUUGGAAUAUUAAUUUACUGAGGAACAAGAGGCAUGAUUUUGUUCAUCAGUCGCUAUCCUGAUUCUGAUCUUAGAACAGCAAAAGAUGGACAGUGCAUGAAAGUUACUGGGGUGUGACUGUCAGAAAUAUUGAUUUUGCUCCAUCGUUCUGCUGAGCAGUUUUGAUUUGUAGGUUUCACAAAAUACUUUAGAUGGUCAUCUGUAGUAAUAAUAUUGAUAUUAAUUAGAAACAAGAACAAACUUCUAGGCACAUGGAUGCUUUGAUCAUAUAGGUUAGUUUCACAAGCAGGUAACUCUACUAACCUGUACUUGACACUAACAUGAUUUCUUCUCAUAAUAUAUUUUCUUUUGACAGUAAUCUUGUGGUUAUAGAAACUUGGAUUGCCUUUUAGCAAUAUGCUUUAUUUUUCACAUCGUUAACAACUAGCAUAUCUUCACAGGUUGUUACUUAUGGAAAUUUUCCCGUCGAGUCCUCAUUUCAAAGGGUUCCAAGAUGUUUGUACAUUGGACUUGCCUGUAUGAGUACAGCCUACAGGGGAUGGGUAUCAAAAGCUGCUAAUGCUGAGCAUUGCAGAUUAAUUUAACUUGGGACUCGGGUCAAUGGAGAAAAGGAUAUGGGGCACGGGUAACCUCUAAUGUUGAUGAAUCUGUUGUUACUGACAUAAAUCCGGAUAACAAGGACGUCCUGAGAUCCUGAAACGGCUACGAGAAAGGAAUGUUUUAAGUGAUGAUCGUAUAAUGUUCCUAAAAAAAGGGUACUCUUAUUUGUUCUGAAUUUUGGAGUUAUAUGAAAUCAUUUCACAUGCACAUUUACAUGCAGAAUUGCAGAUACAUCAAGGAGGGCAGCAGAGUUUGUAUUAUGGGGGUUGUUCAAAGGAACGACAGUGUGUUGAUGAUUGUUCAUCCAUCUGAACCCAUCUCGACUGGCACGAAGAUACAUCAAACAUGCUGAGAAAGAGAAUGCCUGUCGAAAUCCCUGGAUUUAUUUUGUGGGAUGUUAGAGUUGAAAAGGAUGUGCAAAUGCAGGUUGUGAUUAUGCAUUGGUUGUAUAGUGUUUUAUGUAUUUUUCUCUGUUUUUUUUCUCUUCUGUUGGGCUUUGGAUACUUGUAACAUGGAUGGCUUUAGUUUUACCAUGGAGCUGUUUGGGGAUUCUCAGUGGAAUAGAGUUCACAAGUUUUUGUUGUGAAGAAUUCCAGAAGUGUUAUAAAUUGUUCCAGUUUCAAUUUUAUGUGCA

Sequence
(XR_003243823.1):

GCGCUAAUUUGUUCGGAAAAUACCACAGCUUUCCACAGAACGUUGAAUUGAAAGGACCGAAAUACCCUUCAAUUGGGGAAGUUUGUUCUCCUUCCUCGGACGCUUUCUCCUCCAGGAGGAGAGGGAGGGACGAGCAGCGGCGAGAAGAGAUGCGCGGCCGAUCGAGGGCAAGAAGAGAGAGAGAGAGAGAUGGGAUUAGGGCAUGGGCUGAUGAUUGACCAUCGACGACCUGUGUUAGACGAGUGACGAGCCAGCGUUGAAUGGAGAAGGGGAUGGCAGGCUCAAGCUCAAGCUCGCGGCGCCGGUGGUAUCCAGCAAAGUAGACUAUUUUUUUGGGUGGUAUUUUCCGAAUUUUGCAUCCUGCAUCCCACAUGUGCUAUGUUAACCGAUUUUUCCAUUCUUUUUUAUUUAUGUGAUUUAAUUUCGUUUGUUCUGUUUUAGGUGCUGAGACAAGGAAGGUGUUGGUUGUAUAUGACAUUGUUGGUGAUGUGCUUAAAAACUUGACAGUAGUAUUGCUUGCUUACAUGCAUUCUCAAGGUAUAGUUGAAUUUUAUUGGUUCAGAACAUAGGUUCACAGUUUCCAUCCCACUAGCUAAGAAAAUGAUAAAUCUGGAGAGCUGUAAAAAUGUUUGACCUCCACAUUGAAAAGUAGUGGGAAUCUGGUCCUCUAGGCAAUCAACCUUCAAGAAAUGAAGUAUACUUCAUUUGGUGGUGCUGGUUUCAACUCUCGACCAGUUUCAAAUGCCAUUGGUUGCAACUAUUGAGAAUUUGAUUCCUCUGGCAGAACUAGGAAAGAAGUCAUCUGGCCCUUUAUCUCCCGUUCUUCCUACAACUAGGCUAAUCACAUCAUCGCAAAAAAAAAAAAAACUAGGCUAAUCACAUCAGUACCUAUCUCCUCUGGACCUAUGAGUUCAUCUGGUGGUGCGACCUCUUUUGCUCACAGCCGGGCUGUUACAAAUCUGAAUGUAGAAGAUGGUUACUCAAUCAAGGGCAGCAUUCCGAAGUCAAUUCUCUGGAUAUAUGGUUGUUCUUCUCUUUGUGAUGGUGUUUCAUAGCAGGUGGAUUCAUUCUUGGCGCUGUUCAUAAUCCUAUAUUGCUGGUAGUUUGUGGUGGUGAUACUUUGUUUCUGUCGCUGCAAUUGCGAUUUGGAAUAUUAAUUUACUGAGGAACAAGAGGCAUGAUUUUGUUCAUCAGUCGCUAUCCUGAUUCUGAUCUUAGAACAGCAAAAGAUGGACAGUGCAUGAAAGUUACUGGGGUGUGACUGUCAGAAAUAUUGAUUUUGCUCCAUCGUUCUGCUGAGCAGUUUUGAUUUGUAGGUUUCACAAAAUACUUUAGAUGGUCAUCUGUAGUAAUAAUAUUGAUAUUAAUUAGAAACAAGAACAAACUUCUAGGCACAUGGAUGCUUUGAUCAUAUAGGUUAGUUUCACAAGCAGGUAACUCUACUAACCUGUACUUGACACUAACAUGAUUUCUUCUCAUAAUAUAUUUUCUUUUGACAGUAAUCUUGUGGUUAUAGAAACUUGGAUUGCCUUUUAGCAAUAUGCUUUAUUUUUCACAUCGUUAACAACUAGCAUAUCUUCACAGGUUGUUACUUAUGGAAAUUUUCCCGUCGAGUCCUCAUUUCAAAGGGUUCCAAGAUGUUUGUACAUUGGACUUGCCUGUAUGAGUACAGCCUACAGGGGAUGGGUAUCAAAAGCUGCUAAUGCUGAGCAUUGCAGAUUAAUUUAACUUGGGACUCGGGUCAAUGGAGGUGAGUUUCUCUUCAACUGGAAAUUUGAUUAUUAUCAAGAUGAUGAGAUCUCACAGUGCGCUAGUGUUUAAUGCCAUGAGGAUUUUAUUGAAGAAUGCAAACUGCUAUAAUUCUUCCCAACAUAAACCCUGCAAUCUCACAUUUUCCUUGCUAUGAUUGUGGCGACAUGCUGUCGAUUUCUACAUUUCUGAUUUCCAAUCUGGACGGCGAGCAUUGGUCAGAAAAGGAUAUGGGGCACGGGUAACCUCUAAUGUUGAUGAAUCUGUUGUUACUGACAUAAAUCCGGAUAACAAGGACGUCCUGAGAUCCUGAAACGGCUACGAGAAAGGAAUGUUUUAAGUGAUGAUCGUAUAAUGUUCCUAAAAAAAGGGUACUCUUAUUUGUUCUGAAUUUUGGAGUUAUAUGAAAUCAUUUCACAUGCACAUUUACAUGCAGAAUUGCAGAUACAUCAAGGAGGGCAGCAGAGUUUGUAUUAUGGGGGUUGUUCAAAGGAACGACAGUGUGUUGAUGAUUGUUCAUCCAUCUGAACCCAUCUCGACUGGCACGAAGAUACAUCAAACAUGCUGAGAAAGAGAAUGCCUGUCGAAAUCCCUGGAUUUAUUUUGUGGGAUGUUAGAGUUGAAAAGGAUGUGCAAAUGCAGGUUGUGAUUAUGCAUUGGUUGUAUAGUGUUUUAUGUAUUUUUCUCUGUUUUUUUUCUCUUCUGUUGGGCUUUGGAUACUUGUAACAUGGAUGGCUUUAGUUUUACCAUGGAGCUGUUUGGGGAUUCUCAGUGGAAUAGAGUUCACAAGUUUUUGUUGUGAAGAAUUCCAGAAGUGUUAUAAAUUGUUCCAGUUUCAAUUUUAUGUGCA

Sequence
(XR_003243824.1):

CGCGCUAAUUUGUUCGGAAAAUACCACAGCUUUCCACAGAACGUUGAAUUGAAAGGACCGAAAUACCCUUCAAUUGGGGAAGUUUGUUCUCCUUCCUCGGACGCUUUCUCCUCCAGGAGGAGAGGGAGGGACGAGCAGCGGCGAGAAGAGAUGCGCGGCCGAUCGAGGGCAAGAAGAGAGAGAGAGAGAGAUGGGAUUAGGGCAUGGGCUGAUGAUUGACCAUCGACGACCUGUGUUAGACGAGUGACGAGCCAGCGUUGAAUGGAGAAGGGGAUGGCAGGCUCAAGCUCAAGCUCGCGGCGCCGGUGGUAUCCAGCAAAGUAGACUAUUUUUUUGGGUGGUGCUGAGACAAGGAAGGUGUUGGUUGUAUAUGACAUUGUUGGUGAUGUGCUUAAAAACUUGACAGUAGUAUUGCUUGCUUACAUGCAUUCUCAAGGUAUAGUUGAAUUUUAUUGGUUCAGAACAUAGGUUCACAGUUUCCAUCCCACUAGCUAAGAAAAUGAUAAAUCUGGAGAGCUGUAAAAAUGUUUGACCUCCACAUUGAAAAGUAGUGGGAAUCUGGUCCUCUAGGCAAUCAACCUUCAAGAAAUGAAGUAUACUUCAUUUGGUGGUGCUGGUUUCAACUCUCGACCAGUUUCAAAUGCCAUUGGUUGCAACUAUUGAGAAUUUGAUUCCUCUGGCAGAACUAGGAAAGAAGUCAUCUGGCCCUUUAUCUCCCGUUCUUCCUACAACUAGGCUAAUCACAUCAUCGCAAAAAAAAAAAAAACUAGGCUAAUCACAUCAGUACCUAUCUCCUCUGGACCUAUGAGUUCAUCUGGUGGUGCGACCUCUUUUGCUCACAGCCGGGCUGUUACAAAUCUGAAUGUAGAAGAUGGUUACUCAAUCAAGGGCAGCAUUCCGAAGUCAAUUCUCUGGAUAUAUGGUUGUUCUUCUCUUUGUGAUGGUGUUUCAUAGCAGGUGGAUUCAUUCUUGGCGCUGUUCAUAAUCCUAUAUUGCUGGUAGUUUGUGGUGGUGAUACUUUGUUUCUGUCGCUGCAAUUGCGAUUUGGAAUAUUAAUUUACUGAGGAACAAGAGGCAUGAUUUUGUUCAUCAGUCGCUAUCCUGAUUCUGAUCUUAGAACAGCAAAAGAUGGACAGUGCAUGAAAGUUACUGGGGUGUGACUGUCAGAAAUAUUGAUUUUGCUCCAUCGUUCUGCUGAGCAGUUUUGAUUUGUAGGUUUCACAAAAUACUUUAGAUGGUCAUCUGUAGUAAUAAUAUUGAUAUUAAUUAGAAACAAGAACAAACUUCUAGGCACAUGGAUGCUUUGAUCAUAUAGGUUAGUUUCACAAGCAGGUAACUCUACUAACCUGUACUUGACACUAACAUGAUUUCUUCUCAUAAUAUAUUUUCUUUUGACAGUAAUCUUGUGGUUAUAGAAACUUGGAUUGCCUUUUAGCAAUAUGCUUUAUUUUUCACAUCGUUAACAACUAGCAUAUCUUCACAGGUUGUUACUUAUGGAAAUUUUCCCGUCGAGUCCUCAUUUCAAAGGGUUCCAAGAUGUUUGUACAUUGGACUUGCCUGUAUGAGUACAGCCUACAGGGGAUGGGUAUCAAAAGCUGCUAAUGCUGAGCAUUGCAGAUUAAUUUAACUUGGGACUCGGGUCAAUGGAGGUGAGUUUCUCUUCAACUGGAAAUUUGAUUAUUAUCAAGAUGAUGAGAUCUCACAGUGCGCUAGUGUUUAAUGCCAUGAGGAUUUUAUUGAAGAAUGCAAACUGCUAUAAUUCUUCCCAACAUAAACCCUGCAAUCUCACAUUUUCCUUGCUAUGAUUGUGGCGACAUGCUGUCGAUUUCUACAUUUCUGAUUUCCAAUCUGGACGGCGAGCAUUGGUCAGAAAAGGAUAUGGGGCACGGGUAACCUCUAAUGUUGAUGAAUCUGUUGUUACUGACAUAAAUCCGGAUAACAAGGACGUCCUGAGAUCCUGAAACGGCUACGAGAAAGGAAUGUUUUAAGUGAUGAUCGUAUAAUGUUCCUAAAAAAAGGGUACUCUUAUUUGUUCUGAAUUUUGGAGUUAUAUGAAAUCAUUUCACAUGCACAUUUACAUGCAGAAUUGCAGAUACAUCAAGGAGGGCAGCAGAGUUUGUAUUAUGGGGGUUGUUCAAAGGAACGACAGUGUGUUGAUGAUUGUUCAUCCAUCUGAACCCAUCUCGACUGGCACGAAGAUACAUCAAACAUGCUGAGAAAGAGAAUGCCUGUCGAAAUCCCUGGAUUUAUUUUGUGGGAUGUUAGAGUUGAAAAGGAUGUGCAAAUGCAGGUUGUGAUUAUGCAUUGGUUGUAUAGUGUUUUAUGUAUUUUUCUCUGUUUUUUUUCUCUUCUGUUGGGCUUUGGAUACUUGUAACAUGGAUGGCUUUAGUUUUACCAUGGAGCUGUUUGGGGAUUCUCAGUGGAAUAGAGUUCACAAGUUUUUGUUGUGAAGAAUUCCAGAAGUGUUAUAAAUUGUUCCAGUUUCAAUUUUAUGUGCA

Sequence
(XR_003243825.1):

AUGUUGUUGUCAAGAAAUUGAGUCCACAUUGGAGUGUAGUAUGGAUCUUGGACAAUCCCUUGAUUUGUGUUCUUCAGAUGAAUUUGUGCUAGUUUGUUUUCUUGGUUUGGUGAUUUUGGUUCUGAAUCUGGCAUUCUGACUCUAGGGAGUACAAAGAAAAAGAAUCCAAAUGCAACCAUCUCCAUAUGAUUGACCAUCGACGACCUGUGUUAGACGAGUGACGAGCCAGCGUUGAAUGGAGAAGGGGAUGGCAGGCUCAAGCUCAAGCUCGCGGCGCCGGUGGUAUCCAGCAAAGUAGACUAUUUUUUUGGGUGGUAUUUUCCGAAUUUUGCAUCCUGCAUCCCACAUGUGCUAUGUUAACCGAUUUUUCCAUUCUUUUUUAUUUAUGUGAUUUAAUUUCGUUUGUUCUGUUUUAGGUGCUGAGACAAGGAAGGUGUUGGUUGUAUAUGACAUUGUUGGUGAUGUGCUUAAAAACUUGACAGUAGUAUUGCUUGCUUACAUGCAUUCUCAAGGUAUAGUUGAAUUUUAUUGGUUCAGAACAUAGGUUCACAGUUUCCAUCCCACUAGCUAAGAAAAUGAUAAAUCUGGAGAGCUGUAAAAAUGUUUGACCUCCACAUUGAAAAGUAGUGGGAAUCUGGUCCUCUAGGCAAUCAACCUUCAAGAAAUGAAGUAUACUUCAUUUGGUGGUGCUGGUUUCAACUCUCGACCAGUUUCAAAUGCCAUUGGUUGCAACUAUUGAGAAUUUGAUUCCUCUGGCAGAACUAGGAAAGAAGUCAUCUGGCCCUUUAUCUCCCGUUCUUCCUACAACUAGGCUAAUCACAUCAUCGCAAAAAAAAAAAAAACUAGGCUAAUCACAUCAGUACCUAUCUCCUCUGGACCUAUGAGUUCAUCUGGUGGUGCGACCUCUUUUGCUCACAGCCGGGCUGUUACAAAUCUGAAUGUAGAAGAUGGUUACUCAAUCAAGGGCAGCAUUCCGAAGUCAAUUCUCUGGAUAUAUGGUUGUUCUUCUCUUUGUGAUGGUGUUUCAUAGCAGGUGGAUUCAUUCUUGGCGCUGUUCAUAAUCCUAUAUUGCUGGUAGUUUGUGGUGGUGAUACUUUGUUUCUGUCGCUGCAAUUGCGAUUUGGAAUAUUAAUUUACUGAGGAACAAGAGGCAUGAUUUUGUUCAUCAGUCGCUAUCCUGAUUCUGAUCUUAGAACAGCAAAAGAUGGACAGUGCAUGAAAGUUACUGGGGUGUGACUGUCAGAAAUAUUGAUUUUGCUCCAUCGUUCUGCUGAGCAGUUUUGAUUUGUAGGUUUCACAAAAUACUUUAGAUGGUCAUCUGUAGUAAUAAUAUUGAUAUUAAUUAGAAACAAGAACAAACUUCUAGGCACAUGGAUGCUUUGAUCAUAUAGGUUAGUUUCACAAGCAGGUAACUCUACUAACCUGUACUUGACACUAACAUGAUUUCUUCUCAUAAUAUAUUUUCUUUUGACAGUAAUCUUGUGGUUAUAGAAACUUGGAUUGCCUUUUAGCAAUAUGCUUUAUUUUUCACAUCGUUAACAACUAGCAUAUCUUCACAGGUUGUUACUUAUGGAAAUUUUCCCGUCGAGUCCUCAUUUCAAAGGGUUCCAAGAUGUUUGUACAUUGGACUUGCCUGUAUGAGUACAGCCUACAGGGGAUGGGUAUCAAAAGCUGCUAAUGCUGAGCAUUGCAGAUUAAUUUAACUUGGGACUCGGGUCAAUGGAGGUGAGUUUCUCUUCAACUGGAAAUUUGAUUAUUAUCAAGAUGAUGAGAUCUCACAGUGCGCUAGUGUUUAAUGCCAUGAGGAUUUUAUUGAAGAAUGCAAACUGCUAUAAUUCUUCCCAACAUAAACCCUGCAAUCUCACAUUUUCCUUGCUAUGAUUGUGGCGACAUGCUGUCGAUUUCUACAUUUCUGAUUUCCAAUCUGGACGGCGAGCAUUGGUCAGAAAAGGAUAUGGGGCACGGGUAACCUCUAAUGUUGAUGAAUCUGUUGUUACUGACAUAAAUCCGGAUAACAAGGACGUCCUGAGAUCCUGAAACGGCUACGAGAAAGGAAUGUUUUAAGUGAUGAUCGUAUAAUGUUCCUAAAAAAAGGGUACUCUUAUUUGUUCUGAAUUUUGGAGUUAUAUGAAAUCAUUUCACAUGCACAUUUACAUGCAGAAUUGCAGAUACAUCAAGGAGGGCAGCAGAGUUUGUAUUAUGGGGGUUGUUCAAAGGAACGACAGUGUGUUGAUGAUUGUUCAUCCAUCUGAACCCAUCUCGACUGGCACGAAGAUACAUCAAACAUGCUGAGAAAGAGAAUGCCUGUCGAAAUCCCUGGAUUUAUUUUGUGGGAUGUUAGAGUUGAAAAGGAUGUGCAAAUGCAGGUUGUGAUUAUGCAUUGGUUGUAUAGUGUUUUAUGUAUUUUUCUCUGUUUUUUUUCUCUUCUGUUGGGCUUUGGAUACUUGUAACAUGGAUGGCUUUAGUUUUACCAUGGAGCUGUUUGGGGAUUCUCAGUGGAAUAGAGUUCACAAGUUUUUGUUGUGAAGAAUUCCAGAAGUGUUAUAAAUUGUUCCAGUUUCAAUUUUAUGUGCA

Sequence
(XR_003243826.1):

AAGAAAAAAAAAUCUGGCACUUGAGACUCUUGACGCGCGCUAAUUUGUUCGGAAAAUACCACAGCUUUCCACAGAACGUUGAAUUGAAAGGACCGAAAUACCCUUCAAUUGGGGAAGUUUGUUCUCCUUCCUCGGACGCUUUCUCCUCCAGGAGGAGAGGGAGGGACGAGCAGCGGCGAGAAGAGAUGCGCGGCCGAUCGAGGGCAAGAAGAGAGAGAGAGAGAGAUGGGAUUAGGGCAUGGGCUGGGAGUACAAAGAAAAAGAAUCCAAAUGCAACCAUCUCCAUAUGAUUGACCAUCGACGACCUGUGUUAGACGAGUGACGAGCCAGCGUUGAAUGGAGAAGGGGAUGGCAGGCUCAAGCUCAAGCUCGCGGCGCCGGUGGUAUCCAGCAAAGUAGACUAUUUUUUUGGGUGGUAUUUUCCGAAUUUUGCAUCCUGCAUCCCACAUGUGCUAUGUUAACCGAUUUUUCCAUUCUUUUUUAUUUAUGUGAUUUAAUUUCGUUUGUUCUGUUUUAGGUGCUGAGACAAGGAAGGUGUUGGUUGUAUAUGACAUUGUUGGUGAUGUGCUUAAAAACUUGACAGUAGUAUUGCUUGCUUACAUGCAUUCUCAAGGUAUAGUUGAAUUUUAUUGGUUCAGAACAUAGGUUCACAGUUUCCAUCCCACUAGCUAAGAAAAUGAUAAAUCUGGAGAGCUGUAAAAAUGUUUGACCUCCACAUUGAAAAGUAGUGGGAAUCUGGUCCUCUAGGCAAUCAACCUUCAAGAAAUGAAGUAUACUUCAUUUGGUGGUGCUGGUUUCAACUCUCGACCAGUUUCAAAUGCCAUUGGUUGCAACUAUUGAGAAUUUGAUUCCUCUGGCAGAACUAGGAAAGAAGUCAUCUGGCCCUUUAUCUCCCGUUCUUCCUACAACUAGGCUAAUCACAUCAUCGCAAAAAAAAAAAAAACUAGGCUAAUCACAUCAGUACCUAUCUCCUCUGGACCUAUGAGUUCAUCUGGUGGUGCGACCUCUUUUGCUCACAGCCGGGCUGUUACAAAUCUGAAUGUAGAAGAUGGUUACUCAAUCAAGGGCAGCAUUCCGAAGUCAAUUCUCUGGAUAUAUGGUUGUUCUUCUCUUUGUGAUGGUGUUUCAUAGCAGGUGGAUUCAUUCUUGGCGCUGUUCAUAAUCCUAUAUUGCUGGUAGUUUGUGGUGGUGAUACUUUGUUUCUGUCGCUGCAAUUGCGAUUUGGAAUAUUAAUUUACUGAGGAACAAGAGGCAUGAUUUUGUUCAUCAGUCGCUAUCCUGAUUCUGAUCUUAGAACAGCAAAAGAUGGACAGUGCAUGAAAGUUACUGGGGUGUGACUGUCAGAAAUAUUGAUUUUGCUCCAUCGUUCUGCUGAGCAGUUUUGAUUUGUAGGUUUCACAAAAUACUUUAGAUGGUCAUCUGUAGUAAUAAUAUUGAUAUUAAUUAGAAACAAGAACAAACUUCUAGGCACAUGGAUGCUUUGAUCAUAUAGGUUAGUUUCACAAGCAGGUAACUCUACUAACCUGUACUUGACACUAACAUGAUUUCUUCUCAUAAUAUAUUUUCUUUUGACAGUAAUCUUGUGGUUAUAGAAACUUGGAUUGCCUUUUAGCAAUAUGCUUUAUUUUUCACAUCGUUAACAACUAGCAUAUCUUCACAGGUUGUUACUUAUGGAAAUUUUCCCGUCGAGUCCUCAUUUCAAAGGGUUCCAAGAUGUUUGUACAUUGGACUUGCCUGUAUGAGUACAGCCUACAGGGGAUGGGUAUCAAAAGCUGCUAAUGCUGAGCAUUGCAGAUUAAUUUAACUUGGGACUCGGGUCAAUGGAGGUGAGUUUCUCUUCAACUGGAAAUUUGAUUAUUAUCAAGAUGAUGAGAUCUCACAGUGCGCUAGUGUUUAAUGCCAUGAGGAUUUUAUUGAAGAAUGCAAACUGCUAUAAUUCUUCCCAACAUAAACCCUGCAAUCUCACAUUUUCCUUGCUAUGAUUGUGGCGACAUGCUGUCGAUUUCUACAUUUCUGAUUUCCAAUCUGGACGGCGAGCAUUGGUCAGAAAAGGAUAUGGGGCACGGGUAACCUCUAAUGUUGAUGAAUCUGUUGUUACUGACAUAAAUCCGGAUAACAAGGACGUCCUGAGAUCCUGAAACGGCUACGAGAAAGGAAUGUUUUAAGUGAUGAUCGUAUAAUGUUCCUAAAAAAAGGGUACUCUUAUUUGUUCUGAAUUUUGGAGUUAUAUGAAAUCAUUUCACAUGCACAUUUACAUGCAGAAUUGCAGAUACAUCAAGGAGGGCAGCAGAGUUUGUAUUAUGGGGGUUGUUCAAAGGAACGACAGUGUGUUGAUGAUUGUUCAUCCAUCUGAACCCAUCUCGACUGGCACGAAGAUACAUCAAACAUGCUGAGAAAGAGAAUGCCUGUCGAAAUCCCUGGAUUUAUUUUGUGGGAUGUUAGAGUUGAAAAGGAUGUGCAAAUGCAGGUUGUGAUUAUGCAUUGGUUGUAUAGUGUUUUAUGUAUUUUUCUCUGUUUUUUUUCUCUUCUGUUGGGCUUUGGAUACUUGUAACAUGGAUGGCUUUAGUUUUACCAUGGAGCUGUUUGGGGAUUCUCAGUGGAAUAGAGUUCACAAGUUUUUGUUGUGAAGAAUUCCAGAAGUGUUAUAAAUUGUUCCAGUUUCAAUUUUAUGUGCA

Expression Capacity

HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.

HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.


NE_num:

1

NEP:

0.2%

LE_num:

91

LEP:

18.5%

ME_num:

287

MEP:

58.33%

HE_num:

113

HEP:

22.97%

Type:

HCR (High-Capacity ncRNA)

Tissue Specific Expression

cutoff: tau > 0.9 and Average expression in the tissue > 10


Tissue :

pistil

Tau :

0.68

Avg Expression:

10.04

Tip: OSA-LNC107278479 is not a tissue-specific expression ncRNA.

Differential Expression

cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01


Num. Condition log2(FoldChange) Padj
1Amaroo // embryo // dry seed 0 h--/--Amaroo // coleoptile // 3dN1.799153607164994.14293530878649e-11
2Amaroo // embryo // dry seed 0 h--/--Amaroo // coleoptile // 4dN1.566604983655665.68016075924425e-07
3Amaroo // embryo // dry seed 0 h--/--Amaroo // coleoptile // 3dN1dA1.276003377165370.000101218132281662
4Amaroo // embryo // dry seed 0 h--/--Amaroo // embryo // 1hA-1.148584670518680.0209370216771031
5Amaroo // embryo // dry seed 0 h--/--Amaroo // embryo // 3hN-1.179515643848930.0185928173322864
6Amaroo // embryo // dry seed 0 h--/--Amaroo // embryo // 3hA-1.519684854079680.00232940425613573
7Nipponbare // shoot // "Control,22C for 10 min, then 30C for 10 min"--/--Nipponbare // shoot // "Heat,42C for 10 min, then 30C for 10 min"-1.24684736984940.00108726285147568
8Amaroo // embryo // dry seed 0 h--/--Amaroo // coleoptile // 2dN1.154535766719746.61176742454901e-05
9Nipponbare // leaf // 48_hrs_after_mock_inoculation--/--Nipponbare // leaf // 48_hrs_after_inoculation_with_B8_12-1.030589954117150.0142809723015999
10Nipponbare // leaf // Watered;Long_Day--/--Nipponbare // leaf // Drought;Long_Day-1.275652953348720.0279305477425265
11Nipponbare // shoot // "Control,22C for 10 min"--/--Nipponbare // shoot // "Heat,42C for 10 min"-1.350533924068211.24782212449153e-05
12Amaroo // embryo // dry seed 0 h--/--Amaroo // embryo // 24hA1.283667589147343.82348005933383e-05
13Amaroo // embryo // dry seed 0 h--/--Amaroo // coleoptile // 2dA1.01343214282250.000243973848691268