Chr:
Chr3
Start:
18691800
End:
18693711
Strand:
-
Ref_name:
LOC107278416
Sequence
(XR_001544225.2):
UGGAAGAAACCCUCGCGCACAGGAGGAAACUAUCAACGCAUAGGGGAAAGCAGCGGCGGUGGCGCGGGUGCGGAUUGAGAGUCGACGGCGCGACGGCGACGCGGCACUCUCCCCGGAGGCGGCGCUCUCCCCUCCGCCGACCGUCCCCUCCGCUGGCCACUUUCUCACCGAUUGCAUGUCCACCAAUUAGAGUUGGAGAAGACCAGCCUCCUCCUUCUUGGGACCCUAUACCCUUGGCCUGGUAGUACUGGAUUGAUUUUAAGACCAAUUUUCAGUACUGGGUUGAUUUCUGAACUUUAUAGAUGGGAACACUGGAGCUGGGUGACUGAAGCGCAUGGUGGCAUUAGUGCUAAGCUUAAACACUUGCAUUCAAUUUGUAGUUUAGCUCUUAGCUGGCUACUUCUAUUUAUUCUAAGAAAAACAACUGAAUUGUACCCAUUUUGAUUAAUCUGUGACCUUUUCAUGUCCUUCAAAUUUCAUCAUCUUCUGCAUUUGUUGAUCUAAUACGGCCCAGCCACCUGUUUUUUUUUUCAUUCAUAGUCUGCAUGAUCAUCGCGCUUCACCCUGAGUGGGAUCGAUCCUGAUCUGCCAGGUAGGCCUCUGUUCUCGUCGUCAUCAUGGUGCUUUGCCCGUGAGCAUCGCUUGUCGUUCUUUGUUGAGUCAUCGUCAAGCUGUUAACACCAAAAUUUGAUACGGUUGUUUAGAGGAUUCAGUUAAGGAAAGAAGUCAAUCAACCGAUCAGGACUUAUAUCUUUUCUUUUAUCUUUAGGAAACUUGUAUCUUGUCCGAUUAGGACUAAUAUCAACCUAAGGGUAUAAAUAUGUACACCCGUAGACUUUGUAAUCUAUUUCCACAUAUCAAUACAUUACUUUCGGUA
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
1
NEP:
0.2%
LE_num:
LEP:
0.2%
ME_num:
MEP:
8.74%
HE_num:
HEP:
90.85%
Type:
HCR (High-Capacity ncRNA)
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
caryopsis
Tau :
0.53
Avg Expression:
19.14
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
| Num. | Condition | log2(FoldChange) | Padj |
|---|---|---|---|
| Tip: OSA-LNC107278416 is not a differential expression ncRNA. | |||