Chr:
Chr2
Start:
33002977
End:
33004642
Strand:
-
Ref_name:
LOC107278402
Sequence
(XR_001543101.2):
UGAGGUCCUCGCUCGAUCUGGUGCUCCCUUCCCCACCCCGCCCAUGAAUCGGCGUCGACAUCGACAGGAUCUCUUGAGGAGGAGGGGGCGGUUGACGGCGGGAUGCGGGGAGGAGCUUCCGGCUGCGUUGACCACACCCUGAUUCCUCCCUCGAAGGAUCUGGCACGGAUCAGGCCUCCCAUCGCUGCCUCCCUCCCACAGCGGUGGCGUCAUGAUCUGUGAUGCACGAUGAUAAUGAGGUCUGCACUCGUGCCGGUCGGCAGCAGGCGCUGGAGACCCUGGCCACGCAAAGCAGGCAUGGGGAUGGCGGUCAGGAUCGAUGGAUGGAUGGAUGUUCAAUUCGUGGCUGUGGGAUGCCUCUCUAGAUGUUCGUGGGUGAUGGAUAUCUGUCGAUGGGAGACCUAAGGAUCUAUAGUGCUUUGUCGGCUCAACAUCGAUAUGUGGCACUAGCGCCGUCUUGUUUGUUGGAUUCGUGCAUGUAAUAGUAAUUUAGUUACUAAGAGACAUUGAGAAUCAUCGGUGUAAUAGUAACUUGGUUUCUAAGAGAUUUUUUUGGCAAUAUCAAUAUGUUAUGUUGAGAUUGGUGUAAUAGUAAUUUAUUUACUAAGAGAA
Sequence
(XR_001543102.2):
UGGACAAAGCUCAUGGACGAAAGCGUGGGCGGUGGAAGUGUCCUCCAGCGACGGGCGGCGGACGAUGGGCGAAAUCGGUUAACGACGGGUGAAAUCGGUCGGAGGCGGCGAUGGUCGCGGGUCGCCGACGUCCUUUGCGCCGAGCCAUGGAGAGGUGAGGUGCUCCCUUCCCCACCCCGCCCAUGAAUCGGCGUCGACAUCGACAGGAUCUCUUGAGGAGGAGGGGGCGGUUGACGGCGGGAUGCGGGGAGGAGCUUCCGGCUGCGUUGACCACACCCUGAUUCCUCCCUCGAAGGAUCUGGCACGGAUCAGGCCUCCCAUCGCUGCCUCCCUCCCACAGCGGUGGCGUCAUGAUCUGUGAUGCACGAUGAUAAUGAGGUCUGCACUCGUGCCGGUCGGCAGCAGGCGCUGGAGACCCUGGCCACGCAAAGCAGGCAUGGGGAUGGCGGUCAGGAUCGAUGGAUGGAUGGAUGUUCAAUUCGUGGCUGUGGGAUGCCUCUCUAGAUGUUCGUGGGUGAUGGAUAUCUGUCGAUGGGAGACCUAAGGAUCUAUAGUGCUUUGUCGGCUCAACAUCGAUAUGUGGCACUAGCGCCGUCUUGUUUGUUGGAUUCGUGCAUGUAAUAGUAAUUUAGUUACUAAGAGACAUUGAGAAUCAUCGGUGUAAUAGUAACUUGGUUUCUAAGAGAUUUUUUUGGCAAUAUCAAUAUGUUAUGUUGAGAUUGGUGUAAUAGUAAUUUAUUUACUAAGAGAA
Sequence
(XR_001543103.2):
CAAAGCUCAUGGACGAAAGCGUGGGCGGUGGAAGUGUCCUCCAGCGACGGGCGGCGGACGAUGGGCGAAAUCGGUUAACGACGGGUGAAAUCGGUCGGAGGCGGCGAUGGUCGCGGGUCGCCGACGUCCUUUGCGCCGAGCCAUGGAGAGGAUCUCUUGAGGAGGAGGGGGCGGUUGACGGCGGGAUGCGGGGAGGAGCUUCCGGCUGCGUUGACCACACCCUGAUUCCUCCCUCGAAGGAUCUGGCACGGAUCAGGCCUCCCAUCGCUGCCUCCCUCCCACAGCGGUGGCGUCAUGAUCUGUGAUGCACGAUGAUAAUGAGGUCUGCACUCGUGCCGGUCGGCAGCAGGCGCUGGAGACCCUGGCCACGCAAAGCAGGCAUGGGGAUGGCGGUCAGGAUCGAUGGAUGGAUGGAUGUUCAAUUCGUGGCUGUGGGAUGCCUCUCUAGAUGUUCGUGGGUGAUGGAUAUCUGUCGAUGGGAGACCUAAGGAUCUAUAGUGCUUUGUCGGCUCAACAUCGAUAUGUGGCACUAGCGCCGUCUUGUUUGUUGGAUUCGUGCAUGUAAUAGUAAUUUAGUUACUAAGAGACAUUGAGAAUCAUCGGUGUAAUAGUAACUUGGUUUCUAAGAGAUUUUUUUGGCAAUAUCAAUAUGUUAUGUUGAGAUUGGUGUAAUAGUAAUUUAUUUACUAAGAGAA
Sequence
(XR_003240721.1):
UGAGGUCCUCGCUCGAUCUGGUGCUCCCUUCCCCACCCCGCCCAUGAAUCGGCGUCGACAUCGACAGGAUCUCUUGAGGAGGAGGGGGCGGUUGACGGCGGGAUGCGGGGAGGAGCUUCCGGCUGCGUUGACCACACCCUGAUUCCUCCCUCGAAGGAUCUGGCACGGAUCAGGCCUCCCAUCGCUGCCUCCCUCCCACAGCGGUGGCGUCAUGAUCUGUGAUGCACGAUGAUAAUGAGGUCUGCACUCGUGCCGGUCGGCAGCAGGCGCUGGAGACCCUGGCCACGCAAAGCAGGCAUGGGGAUGGCGGUCAGGAUCGAUGGAUGGAUGGAUGUUCAAUUCGUAUGUGUUCCAAUGAAAGUGGCUGUGGGAUGCCUCUCUAGAUGUUCGUGGGUGAUGGAUAUCUGUCGAUGGGAGACCUAAGGAUCUAUAGUGCUUUGUCGGCUCAACAUCGAUAUGUGGCACUAGCGCCGUCUUGUUUGUUGGAUUCGUGCAUGUAAUAGUAAUUUAGUUACUAAGAGACAUUGAGAAUCAUCGGUGUAAUAGUAACUUGGUUUCUAAGAGAUUUUUUUGGCAAUAUCAAUAUGUUAUGUUGAGAUUGGUGUAAUAGUAAUUUAUUUACUAAGAGAA
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
1
NEP:
0.2%
LE_num:
LEP:
28.05%
ME_num:
MEP:
40.04%
HE_num:
HEP:
31.71%
Type:
HCR (High-Capacity ncRNA)
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
anther
Tau :
0.90
Avg Expression:
58.45
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
Num. | Condition | log2(FoldChange) | Padj |
---|---|---|---|
1 | Taichung 65 // shoot_apical_meristem // 0_days_after_shift--/--Taichung 65 // shoot_apical_meristem // 12_days_after_shift | 1.99498983417816 | 0.0429289303455051 |
2 | BR-IRGA_409 // spikelet // control condition (29C) for 7 hrs--/--BR-IRGA_409 // spikelet // high temperature treatment (38C) for 7 hrs | 1.01141712472403 | 1.85363245659734e-05 |
3 | Vialone_Nano // root // control--/--Vialone_Nano // root // 100 mM NaCl | -1.57554856393044 | 0.0167009380972876 |