Chr:
Chr8
Start:
7101696
End:
7104137
Strand:
+
Ref_name:
LOC107278354
Sequence
(XR_001548200.2):
CCCUGUGCCCGCGACUUAUUCUGAAAAACCAAAUGUCCCUUCUGUAUCGGUGGCGCCAAAUCCACCUCCUGGCGGCAAUUUACCCGCGCCAAUUUUCAUUGACGCGCGAAAUCUUGGCACCGCGCCGAAUGCCGAAUCCCUCUCGUGGCGCGCCCAAUCUCUCAUCAAAUAUCUCCUAGUGCCAAUGAUCUCCCCCACCCCUUCACCUCCCCUGAAUCCACGCAAGUAAUAGGCAGAGGAUUGAGGAACCAGUACAGAACUCCAGGGCCAAGCCAGCGCCCGCCGCCUAGGAGAGCGUCGAGCCCGGUGGCCGGCAGGAGGGCGGGGCGCCUGCAGCAGCACGGCCGUGAGGCAUGGAGACCCCGGCAGCCGGCGGGAGCGGCGCUGCUCCAGGGCGGCCGACUGGACAACGGGGCACGGUGGCUGCGGCCGCGAGGCAUAGAGCAGGCUGCUCCGCGGCAGCCGAUCCGACAGGAGUCUGGACAACGGCUUGGGCGAAGCCAGCCAUGGAGCGACCUGGCUGGAUUUCUCGGCAGAGCUGGAGACCUGGGGGGCAGCGGUAAGCAGGCAGGAUGUUAGGACUACCUCGAUGGCCAAUGGUGGGAAGCACAGCAGGCGGUAGUAAGCGGUGAUUUUUUGUUUCCUUCUGUGUCGAUCUGUUGCACAUAAAUCAAAUUUCACACUUUUCUGGUUGCUUAAACUUACUGUAUGAAUCUGCAACUAUUAAUGUUAUGAAAAUUUAUUUAUUAUUUGUUUGAAACAUUCCUUAAAUGUUGAUUUUGUAGGUUAAGACUUUAUCUCACCGAUACGAAAUUCUUGAAUUUUUACCUGACCAAUGUCUCUUGAACUGAAUGUUAUGAUGGACUAUAGACUAUAAAUAUUUUCUGACAUGUUGGACAUAUCCAAUAUAUGCAUAAUACUGUACUAAGUACUGAAUAUGCCCAAAGUAUAUAAAAUUGAAUGGUUACAUGGACAUAACGACUGGCAGUAUUUACUAAGCACAGACAUAUCGAGGUCUGAAUGAGCAUAUUUAUCUAGUGUCCAUGUUUCACCUUCGUAAUUGGGAUCUUUUUAAUAUUCACUUUGUUCUAAAGUAUGUCAAUGUGAGGACAUAUAUUUCCUUGUAUACAUGUAUCCUUACUGAUGAUUAAUUUAUGACUUCAUCAGCAGGGAAAAUAUAUGGUUGCUAGUUUUCUAAGCAGUCACUGUUGUGCUUGUUCUUAAGUAUGCUGUUACAGUAGUCUACAGAACUAUUUGGUGAUGAUUCCACUCCUUAUGCGCAUACUAUACAUGUAAACUUUUGAUGGUCAUGCCUUGUCUUAAAAGGUAGAUAUUUGUCAUGGAAGCACUUGUUUCAUCUUUUCUACGGCAUUGGUGUGUUUGUUCUGUUUGCAGAUUUUUUUAGUAAUGAAAACCACUGUGGAUGUUGUUAGUUUAAUUUUAAACACUAAUCUUGAGAUCACCCUUCUCUCUGAAGAUGUUGAUUUUGUUUGCAGGCAUCAGAAGUGAGCCUAAAUUUAUGUUUCUGUCUGGAGGCAUGUUCUUGAUAAGAACGAACACAUUGAUGGUUUUUGUGUUUUUCAUACUAUUUUUCAAUCUAUUGCUAUAUAGUAUAUGAAUCCAUAUUUUCUAGCAUUACAGAUAUCCAUAUUUUCUCAAAAGCUCUGUUAUGUUUCCUAAAAAUUGUUUUUUAUUGCGAUAUCUAUAUCCAUGUCAACUGAACAAUAACUAGGUUUUCAUUCAGGACUAAAUAUAUAUACUAGUUUGUUGCAUACUAUUUUUUAGCUAGAUAUAAUAGCUGCACUGGCAUUGUUGAAAUAAUAUCUGUUAAAAUAAUUAGUUUUUUAUUUCAGUAUUGGGUAUAUAUUUGGGGCAAGGCACCUUGCAAGUGCAUCAUUGCUCGUUCAUGUAAAUUGUUGUUUUAGAUUUGUAAAAAAAUAGUACUUUUUAGUGAGUCACAAAAGAAUUUAUUUGUAUUAUUAUCCAACAUUCGGUAUUAUAUUCUAAAACAUGUAUUUUAAUGCAUUGUUGGUUCACUUUAACUUUUUAGUACAAAUUUAAAUGCGCAGAAGAUCCAAUUCAACAUAAUCAAUGGUUGAAAUAACAUUCUAAAAUUUGAAUUAUUAUUCAGUGUAACAUUAUGGAGUUGCAAGGAUUCAAGGAUCUCUGUCAUGAAGUUAUUUAAUGCAAUAUUUGUCAAAUGUCAUGCUCAGCUUUUUAUCUGUUGUGAAGUCACAUAAUUUCUUUUCACUUGUCCAAAGCAGUUAAUGGCUUAAAAAUUGUAAUAGUUAGUUCUGUUGCAGAUUGCCUAUUUUUGUGUUACAUGCAUGUGUUUACAGCAUCAA
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
1
NEP:
0.2%
LE_num:
LEP:
73.78%
ME_num:
MEP:
26.02%
HE_num:
HEP:
0.0%
Type:
MCR ()
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
shoot
Tau :
0.77
Avg Expression:
0.98
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
Num. | Condition | log2(FoldChange) | Padj |
---|---|---|---|
1 | Amaroo // embryo // dry seed 0 h--/--Amaroo // embryo // 12hA | 4.09059393197239 | 0.0205512996551896 |