Chr:
Chr6
Start:
28372919
End:
28374529
Strand:
-
Ref_name:
LOC107278111
Sequence
(XR_001546702.2):
UACUGGUUUGGUGAUUGUGAAAACCAGGUUCAGCUAUCUGAAGUUCUAGUUGGCAUUGCACAUCCCAUUGAUAUCAAACUUCUCUGCAAGGGUGUUCACUCCUCGGCAAAAUAUUCUCUGGCCUCAAUGGAAAUCCGAAAAGGAGGGGAAAACAAUGAGCGAUACGGUGUUGGUUGAUAUGCAUUGUCCUGAGAGUUCUAUGUGUCAUUGUGUUCCUGGGUUGGUAUUGUGUCUUAAUAUCACAAAAUAUAUGGAUUAUACUCAUGAGGUGAAAGAGGUCACAGGGACAUUACAUGUACUACUUGUCUUAAGAAAGAGAUGGUGUUAGCAUGACAAGAGGUUUUACUAGAAUUAAAAGGACCAAGCUUAUAUUGGCCUUUACCAGAUUGAAAUCGGUUAGGCUACAGUGGAUAAUGGGUUCAAGCUAUGAUUCAUAAUAUUCAUAUCUGAGUUGGUCGUAUAGUAUUUUGGGGAAUAUUUGCAAGUUACCAAUGGUCCUGUCAGUGAAAUUAUUUGUCCUCAAACCAUACUGAUCUCGAAGACUGAAAGUUUCAAGACAAGUAUUGGAGCAAUAAUUUGAGUACCUAGUCUGUGUAAGCAAUACUGGUGAAUAAUAGAGAGGAUCCUGAGUAUCUCUGUGAACUUUUUAUCACCAUGUUUCAUCGAUUGAGCAUUAAAAUGAAGCACCAUGGCCGGAUCUCCUAUGCCAAUGGGCGGUACUUCUGCUUUGCUCGCGACCAGGAUAAGUGGCUCAUCUCUGAUGCUGAGACUAUUGAGGCAGAAGAUUCAUGGGAGCAGUUGCUUGAACGCUUCAGAGACUGCAGGCUCCAACCUGAAGUUCUUUUUUUCGAGAUCAUCAAUUAGAUAGAUGGACUGCCUGGAAGAACCCUGUCAUAAUAUUGUAUUCAUAGCUUCAAGUUAAUUUUGACAUUUUUGCAAGCAACUUGCUUGUCAUUAUCUUGAUGCUAACAGUUUUGAUAUAUCUCCUUGUAAAACUACCAUUUCUUACCAGUUUUGGAAUGUUCUUGAUCAUUGAACAGCCUGUAUUUGUUCCAUUCCUUCUCUUUCCAGUUUCCAGUGGUGUCAAGGAAAGUUACCUCUUUGUGAUUGAAAAAAUAAAGAGGAAAAAUAUA
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
1
NEP:
0.2%
LE_num:
LEP:
90.65%
ME_num:
MEP:
9.15%
HE_num:
HEP:
0.0%
Type:
MCR ()
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
shoot
Tau :
0.85
Avg Expression:
0.42
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
| Num. | Condition | log2(FoldChange) | Padj |
|---|---|---|---|
| 1 | Amaroo // embryo // dry seed 0 h--/--Amaroo // embryo // 24hN | 4.42335680680246 | 0.000286528155493477 |
| 2 | Amaroo // embryo // dry seed 0 h--/--Amaroo // embryo // 12hN | 3.93448112452978 | 0.00190291447590146 |
| 3 | Amaroo // embryo // dry seed 0 h--/--Amaroo // coleoptile // 2dN | 4.13185110902003 | 0.00186503888313957 |